Microbiology Flashcards

1
Q

What are the major differences between prokaryotes and eukaryotes?

A
Prokaryotes:
\+no "true" nucleus (nucleoid)
\+no paired chromosomes
\+cell wall made of peptidoglycans
\+divide by binary fission
Eukaryotes:
\+possess a "true" nucleus and nucleolus
\+nucleus surrounded by membrane
\+contain organelles
\+divide by mitosis
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2
Q

What is the major difference between gram positive and gram negative bacteria?

A

Gram negative bacteria have a lipid bilayer outer membrane containing porin proteins.

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3
Q

What are porins?

A

Proteins in outer membrane that regulate uptake of hydrophilic materials from the environment (sugars, amino acids, ions). Antibiotics often pass through porins to enter the cell.

ONLY IN GRAM-NEGATIVE BACTERIA

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4
Q

What is a bacterial capsule?

A

+outermost structure of bacteria, tightly bound to cell wall
+usually polysaccharide
+functions: inhibits phagocytosis, promotes adherence, acts as a barrier to toxic compounds (e.g. antibiotics)

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5
Q

What are flagella?

A

Proteins extending from cell surface of some bacteria; used for motility.

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6
Q

What are fimbriae/pili?

A

Protein extending from cell surface of some bacteria; used as attachment structures to promote sexual conjugation and adhesion to human cells.

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7
Q

What are sex pili?

A

Allow binding between bacteria; form a tube through which bacterial genes can be transferred.

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8
Q

What codes for sex pili?

A

F plasmid

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9
Q

What are the differences between fimbriae and pili?

A
Fimbriae:
\+sticky projections
\+adherence and attachment
\+shorter than flagella
\+hundreds per cell
\+biofilm
Pili:
\+hollow rod-like projections
\+made of pilin protein
\+longer than fimbriae, shorter than flagella
\+typically 1-2 per cell
\+sex pili mediate conjugation
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10
Q

What are the functions of flagella?

A

+locomotion
+stimulation [of antibody formation]
+adhesion [to human cells]

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11
Q

What are the structural differences between gram positive and gram negative bacteria?

A
Positive:
\+thick (multi-layered) peptidoglycan layer
\+many teichoic acids
\+NO periplasmic space, porins, or outer membrane
\+virtually no LPS content
\+some have spores
\+only produce EXOTOXINS
\+sensitive to lysozyme
Negative:
\+thin (single-layered peptidoglycan)
\+NO teichoic acids
\+possess periplasmic space, porins, and outer membrane
\+high LPS content
\+NO spores
\+produce exotoxins AND endotoxins
\+resistant to lysozyme
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12
Q

What is the outer membrane in bacteria?

A
Only in gram negative bacteria
LPS embedded in outer membrane
Barrier to noxious environmental materials
Sieve for small water-soluble molecules
Adsorption site for bacteriophage
Adsorption site for sexual pili
Reservoir for proteases, enzymes, toxins
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13
Q

What are the regions of LPS?

A

Lipid A - responsible for endotoxic activity of molecule
Core - contains unusual sugar (ketodeoxyoctonate)
O-antigen - specific polysaccharide; highly variable from one species and strain to another

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14
Q

In terms of LPS, what happens when gram negative bacteria lyse?

A
  1. LPS binds LPS-binding protein
  2. Bound LPS attaches to macrophage
  3. Entire complex induces transcription of cytokines
  4. Cytokines induce coagulation, inflammation, and MAC lysis
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15
Q

What is a major structural similarity between gram positive and gram negative bacteria?

A

Both can potentially have capsules.

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16
Q

What kind of spore can ravage a hospital?

A

Clostridium
Obligate anaerobe
Super hard to get rid of

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17
Q

What kind of bacteria have spores?

A

Only gram positive

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18
Q

What do spores do for bacteria?

A

Protect from heat, radiation, and chemical/enzyme attacks

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19
Q

Which pathogenic bacteria produce spores?

A

Bacillus

Clostridium

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20
Q

What is the starter molecule for peptidoglycan synthesis?

A

NAG

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21
Q

What is a colony forming unit?

A

Estimate of the number of living cells

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22
Q

What is used to create divisions within bacteria?

A

Proteins

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23
Q

What is an operon?

A

Two or more genes are controlled by ONE promoter –> polycistrionic mRNA
Only found in prokaryotes

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24
Q

What are the terminal electron acceptors for bacterial anaerobic respiration?

A

Metals (nitrate, sulfate, etc)

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25
Q

Most human pathogens are ______ an/aerobes

A

Facultative anaerobes

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26
Q

Describe the components of an operon.

A

Operon = encodes multiple genes, but controlled by one promoter

Operator = segment of DNA that is located adjacent to a promoter and usually binds a repressor protein

Promoter = RNA pol binds here to translate the operon

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27
Q

How do bacteria become resistant to antibiotics?

A

Through genetic mutation

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28
Q

Why are mutations easy to see in bacteria?

A

Bacterial genome is haploid, therefor unable to mask mutations

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29
Q

What structural component of bacteria is the functional equivalent of most of the organelles in a eukaryotic cell?

A

The cell membrane

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30
Q

How do you clinically differentiate and ID bacteria?

A
  1. Morphology and gram stain
  2. Growth condition/abilities
  3. ID products of metabolism
  4. Simple chemical or enzymatic tests
  5. Molecular techniques (RFLP, sequencing, etc)
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31
Q

What is ribotyping and what are the pros/cons of using it?

A

Form of sequencing bacteria. Genes that code for ribosomal RNA are cut and separated by electrophoresis. The resulting fingerprint is visualized with fluorescent probes.

Pros:
rapid
reproducible
works for a wide range of bacterial specieis

Cons:
expensive

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32
Q

How do you clinically differentiate between strains of bacteria?

A

Molecular techniques are powerful, but they cannot differentiate between strains. Must use basic chemical/enzymatic tests to ID strains.

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33
Q

How is transcription controlled in an operon?

A

Transcription initiation controlled by the -35 and -10 box, found in the promoter region (RNA pol binding site)

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34
Q

Which mechanisms produce genetic change in bacteria?

A
  1. Rapid mutation rate, rapid generation time

2. DNA acquisition from environment or other bacteria/organisms

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35
Q

What is a silent mutation?

A

Base substitution in DNA that has no effect on the polypeptide produced. Can still have significant effect on gene expression due to changing mRNA stability.

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36
Q

What is the main difference between transposons and insertion sequences?

A

Transposons can pick up and carry other genes with them (e.g. antibiotic resistance). Insertion sequences cannot.

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37
Q

What is pathogenicity?

A

Ability of an organism to gain entry into a host’s tissues and bring about an anatomic or physiological change

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38
Q

What is virulence?

A

Degree of pathogenicity of a parasite

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39
Q

What are three virulence factors?

A
  1. Structural (cell wall, capsule, pili)
  2. Biochemical (exotoxins, enzymes)
  3. Genetic (plasmids, phages)
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40
Q

What is bacterial competence?

A

Ability of bacterium to take up naked DNA from the environment

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41
Q

What are two examples of adherence factors?

A

Adhesins (surface projections) and biofilms (aggregate of microorganisms in which cells adhere to each other and resist clearance)

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42
Q

How does Neisseria gonorrhea protect against antibodies?

A

By producing anti-IgA proteases

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43
Q

Which cells are the number one responders to infection?

A

Neutrophils

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44
Q

What are the five main mechanisms of exotoxins?

A
  1. Inhibit [protein synthesis]
  2. Hyperactivate [cellular proteins]
  3. Form [pores in cellular membranes]
  4. Interfere [with nerve transmission]
  5. Activate [T-cells nonspecifically]
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45
Q

What are bactericidal antibiotics?

A

Antibiotics that target the cell wall, causing lysis.

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46
Q

What are examples of bactericidal drugs?

A

Beta lactams
Vancomycin
Daptomycin (cell membrane only)

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47
Q

What are bacteriostatic antibiotics?

A

Inhibit bacterial growth and/or replication.

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48
Q

What are the classes of bacteriostatic antibiotics?

A

Abx that inhibit RNA synthesis
Abx that block protein synthesis
Abx that target DNA or DNA synthesis
Antimetabolite abx

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49
Q

Antibiotic that inhibits RNA synthesis

A

Rifamycin

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50
Q

Abx that block protein synthesis

A

Aminoglycosides
Macrolides
Tetracyclines

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51
Q

Abx that target DNA/DNA synthesis

A

Quinolones

Metronidazole

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52
Q

Antimetabolite abx

A

Trimethoprim-sulfamethoxazole

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53
Q

What are the gram positive and negative Beta Lactams?

A

Penicillins
Cephalosporins
Carbapenems
Monobactams

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54
Q

What are the gram positive cocci Beta Lactams?

A

Vancomycin

Daptomycin

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55
Q

What are the TB drugs?

A

Isoniazid
Ethambutol
Pyrazinamide

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56
Q

What are the classes of penicillins?

A

Natural penicillins
Anti-staphylococcal penicillins
Aminopenicillins
Extended spectrum penicillins

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57
Q

What are the natural penicillins?

A

V and G

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58
Q

What are the anti-staphylococcal penicillins?

A

Nafcillin
Oxacillin
Dicloxacillin

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59
Q

What are the aminopenicillins?

A

Ampicillin

Amoxicillin

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60
Q

What are the extended spectrum penicillins?

A

Piperacillin
Ticarcillin
Carbenicillin

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61
Q

What are the Beta Lactamase inhibitors?

A

Clavulanic acid
Sulbactam
Tazobactam

62
Q

What is the mechanism of action for anti-staphylococcal penicillins?

A

Have large R side groups which make them resistant to Staphylococcal beta-lactamases

63
Q

Mechanism of action for aminopenicillins

A

Addition of an amino group to the R side chain –> penetration through PORINS of SOME gram negatives (especially enteric rods)

64
Q

Aminopenicillins are particularly useful for _____.

A

Enteric rods

65
Q

Mechanism of action for extended spectrum penicillins

A

Better able to penetrate GRAM NEGATIVE PORINS than aminopenicillins

66
Q

Mechanism of action for Beta Lactamase inhibitors

A

Bind beta-lactamases and act as a sponge to take up all the beta-lactamases and protect beta-lactam ring of antibiotic from being degraded

67
Q

What are natural penicillins active against?

A

Most streptococcal species (not S. pneumoniae)
Most gram positive anaerobes
Treponema pallidum (spirochete)

68
Q

Natural penicillins are ineffective against _____.

A

Aerobic and anaerobic gram negative rods

69
Q

What is the function of transpeptidases?

A

Catalyze the cross-linking of peptidoglycan residues in the bacterial cell wall

70
Q

What is the mechanism of action for Beta Lactam abx?

A

Bind transpeptidases and block this reaction, resulting in weak cell walls and bacterial lysis if bacteria are actively growing

71
Q

Aerobic gram-positive bacteria

A

Staph
Strep
Enterococci
Listeria

72
Q

Which antibiotic first became resistant to penicillin and how did it do so?

A

Staph aureus

Made Beta-Lactamase: enzyme that breaks beta-lactam ring, inactivating the antibiotic

73
Q

Which bacteria causes syphilis?

A

Treponema pallidum

74
Q

Beta-lactam ring is the important structural component of which antibiotic?

A

Penicillin

75
Q

Which bacteria are mostly resistant to penicillin?

A
Staph aureus (always)
Strep pneumo (most of the time)
76
Q

What would you use to treat MRSA?

A

Vancomycin

CANNOT use anti-staphylococcal penicillins

77
Q

What would you use to treat MSSA?

A

Nafcillin

CAN use anti-staphylococcal penicillins

78
Q

What would you use to treat MSSE?

A

Nafcillin

CAN use anti-staphylococcal penicillins

79
Q

Methicillin resistance is due to _______.

A

Altered PBP

80
Q
Catalase positive
Coagulase positive
Gram positive
Cocci
Clusters
A

Staph aureus

81
Q
Catalase positive
Coagulase negative
Gram positive
Cocci
Clusters
Novobiocin sensitive
A

Staph epidermidis

82
Q
Catalase positive
Coagulase negative
Gram positive
Cocci
Clusters
Novobiocin resistant
A

Staph saprophyticus

83
Q

Catalase negative
Gram positive
Cocci
Chains

A

Strep

84
Q

Gram positive
Lancet shaped diplococci
Alpha hemolytic
Optochin sensitive

A

Strep pneumo

85
Q

Gram positive
Cocci
Alpha hemolytic
Optochin resistant

A

Strep viridans

86
Q
Gram positive
Cocci
Beta hemolytic
Positive cAMP test
Bacitracin resistant
A

Strep agalactiae

87
Q

Gram positive
Cocci
Non-hemolytic

A

Strep bovis

88
Q

Gram positive rods
Terminal spores
Positive for lecithinase alpha toxin

A

Clostridium perfringens

89
Q
Gram positive
Non-spore forming
Bacilli
Actin rockets
Tumbling motility
A

Listeria monocytogenes

90
Q
Gram positive
Branching
Bacilli
Obligate aerobe
Partially acid fast
A

Nocardia asteroides

91
Q

Gram positive
Bacilli
Spore forming
Anaerobic

A

C. Diff

92
Q

Gram positive
Cocci
Grows in 6.5%
Hydrolyzes esculin

A

Enterococcus faecelis

93
Q

Spectrum of activity for aminopenicillins

A

Same as natural penicillins, with the addition of some strains:

E. coli
Shigella
Salmonella Enterica
Borrelia burgdorferi

94
Q

Extended spectrum penicillins treat….

A

Same as natural penicillins, with the addition of:

Some strains of pseudomonas aeruginiosa

95
Q

Five types of exotoxins

A
  1. Inhibiting protein synthesis
  2. Hperactivation of cellular proteins
  3. Form pores in cellular membranes
  4. Interfere with nerve transmission
  5. Non-specific activation of T cells
96
Q

Corynebacterium diphtheriae toxin

A

Inhibits protein synthesis

Acts at elongation factor-2

97
Q

S. dysenteriae toxin

A

Shiga toxin
Inhibits protein synthesis
Damage intestinal epithelium and glomerular endothelial cells
Leads to kidney failure

98
Q

V. cholerae toxin

A

Hyperactivation of cellular proteins

99
Q

Staph aures toxin

A

Creates pores causing hemolysis and tissue damage via LOSS OF IONS
Indirect cell lysis

100
Q

C. perfringens toxin

A

Membrane-disrupting toxins with phospholipase C activity
Targets cholesterol
Direct cell lysis

101
Q

Clostridium tetani toxin

A

Interferes with nerve transmission

102
Q

What part of LPS is a toxin?

A

Lipid A: endotoxin that stimulates an inflammatory response

103
Q

Digestive enzymes secreted by bacteria

A
Hyaluronidase
Collagenase
Lecithinase
Fibrinolysin
Streptolysin O
104
Q

Common illnesses from Listeria monocytogenes

A

Food poisoning
Neonatal sepsis
Meningitis

105
Q

Common diseases from Clostridium perfringens

A
Food poisoning
Necrotizing enteritis
Cellulitis
GAS GANGRENE
Septicemeia
106
Q

Actinomyces diseases

A

Abscesses above diaphragm

Infections after dental work

107
Q

Proprionibacterium illnesses

A

Acne

108
Q

How is diphtheriae transmitted?

A

Respiratory droplets; person to person

109
Q

Where is Listeria monocytogenes found?

A

Intestinal tract of many animals

110
Q

Where is Actinomyces found?

A

Endogenous oral flora

111
Q

Calling card of diphthereiae

A

Bullneck

Myocarditis

112
Q

Sulfur granules

A

Actinomyces

113
Q

First generation cephalosporins

A

Cefazolin

Cephalexin

114
Q

Second generation cephalosporins

A

Cefuroxime

115
Q

Third generation cephalosporins

A

Ceftriaxone

116
Q

Fourth generation cephalosporin

A

Cefepime

117
Q

Extended spectrum penicillins good for…

A

Pseudomonas

Better able to penetrate gram negative porins than aminopenicillins

118
Q

Beta-lactamse inhibitors are combined with…

A

Aminopenicillins

ESPs

119
Q

Most potent, broad spectrum drugs available

A

ESP + Beta-Lactamase inhibitor

Carbapenems

120
Q

Penicillin toxicities

A

Type I hypersensitivity: rash, anaphylaxis

Type II hypersensitivity: hemolytic anemia

121
Q

First gen cephalo’s used for

A

GAS
Viridans
S. pneumo

122
Q

Treat pseudomonas with

A

ESP + BLI
Fourth generation cephalosporin (cefepime)
Carbapenems

123
Q

Hail Mary drug

A

Imipenem

124
Q

Use Vanco for…

A

MRSA
S. pneumo
Enterococci

125
Q

Vancomycin mechanism

A

Cell wall inhibitor

binds to D-Ala-D-Ala building block of peptigoglycan

126
Q

Patient with history of penicillin allergy should not be given….

A

Cephalosporins

127
Q

Carbapenem toxicity

A

Seizures in patients with CNS disease or renal insufficiency

N/V/D

128
Q

Aminoglycosides

A

Streptomycin
Gentamicin
Amikacin

129
Q

Aminoglycosides toxicity

A

Nephrotoxicity

Ototoxicity

130
Q

Macrolides

A

Erythromycin
Clarithromycin
Azithromycin

131
Q

Ketolides

A

Telithromycin

132
Q

Toxicities of Macrolides and Ketolides

A

N/V/D
Inhibition of cytochrome p-450
Visual disturbances

133
Q

DNA gyrase inhibitors

A

Quinolones

134
Q

RNA polymerase inhibitors

A

Rifamycins

135
Q

Anti-folate drugs

A

TMP/SMX

136
Q

Treat CA-MRSA with

A

TMP/SMX

137
Q

TMP/SMX toxicities

A

Rash

GI

138
Q

Treat C. diff with

A

Metronidazole

139
Q

TB drugs block_____

A

Mycoic acid synthesis

140
Q

Treat TB with

A

Isoniazid + Rifapentine

141
Q

Antibiotics that target protein synthesis

A
Aminoglycosides
Macrolides
Clindamycin
Tetracyclines
Streptogramins
142
Q

Antimetabolites

A

TMP/SMX

Metronidazole

143
Q

T/F

Ceftaroline is active against MRSA

A

True

144
Q

Active against pseudomonas

A

Cefepime
ESPs
Carbapenems
Aztreonam

145
Q

Useful in empiric treatment of CA-pneumonia

A

Levofloxacin

146
Q

Drug of choice for Legionella, Mycoplasma, and Chlamydia

A

Macrolides

147
Q

Used for anerobic infections; many strains of CA MRSA are susceptible

A

Clindamycin

148
Q

Drug of choice for Neisseria gonorrhoeae

A

Ceftriaxone

149
Q

Used for MRSA, strep pneumo, and serious C. diff

A

Vancomycin

150
Q

Commonly used for UTIs, bacterial diarrhea

A

Cipro

151
Q

Used to treat less serious C. diff

A

Metronidazole