Microbiology Flashcards
What are the major differences between prokaryotes and eukaryotes?
Prokaryotes: \+no "true" nucleus (nucleoid) \+no paired chromosomes \+cell wall made of peptidoglycans \+divide by binary fission
Eukaryotes: \+possess a "true" nucleus and nucleolus \+nucleus surrounded by membrane \+contain organelles \+divide by mitosis
What is the major difference between gram positive and gram negative bacteria?
Gram negative bacteria have a lipid bilayer outer membrane containing porin proteins.
What are porins?
Proteins in outer membrane that regulate uptake of hydrophilic materials from the environment (sugars, amino acids, ions). Antibiotics often pass through porins to enter the cell.
ONLY IN GRAM-NEGATIVE BACTERIA
What is a bacterial capsule?
+outermost structure of bacteria, tightly bound to cell wall
+usually polysaccharide
+functions: inhibits phagocytosis, promotes adherence, acts as a barrier to toxic compounds (e.g. antibiotics)
What are flagella?
Proteins extending from cell surface of some bacteria; used for motility.
What are fimbriae/pili?
Protein extending from cell surface of some bacteria; used as attachment structures to promote sexual conjugation and adhesion to human cells.
What are sex pili?
Allow binding between bacteria; form a tube through which bacterial genes can be transferred.
What codes for sex pili?
F plasmid
What are the differences between fimbriae and pili?
Fimbriae: \+sticky projections \+adherence and attachment \+shorter than flagella \+hundreds per cell \+biofilm
Pili: \+hollow rod-like projections \+made of pilin protein \+longer than fimbriae, shorter than flagella \+typically 1-2 per cell \+sex pili mediate conjugation
What are the functions of flagella?
+locomotion
+stimulation [of antibody formation]
+adhesion [to human cells]
What are the structural differences between gram positive and gram negative bacteria?
Positive: \+thick (multi-layered) peptidoglycan layer \+many teichoic acids \+NO periplasmic space, porins, or outer membrane \+virtually no LPS content \+some have spores \+only produce EXOTOXINS \+sensitive to lysozyme
Negative: \+thin (single-layered peptidoglycan) \+NO teichoic acids \+possess periplasmic space, porins, and outer membrane \+high LPS content \+NO spores \+produce exotoxins AND endotoxins \+resistant to lysozyme
What is the outer membrane in bacteria?
Only in gram negative bacteria LPS embedded in outer membrane Barrier to noxious environmental materials Sieve for small water-soluble molecules Adsorption site for bacteriophage Adsorption site for sexual pili Reservoir for proteases, enzymes, toxins
What are the regions of LPS?
Lipid A - responsible for endotoxic activity of molecule
Core - contains unusual sugar (ketodeoxyoctonate)
O-antigen - specific polysaccharide; highly variable from one species and strain to another
In terms of LPS, what happens when gram negative bacteria lyse?
- LPS binds LPS-binding protein
- Bound LPS attaches to macrophage
- Entire complex induces transcription of cytokines
- Cytokines induce coagulation, inflammation, and MAC lysis
What is a major structural similarity between gram positive and gram negative bacteria?
Both can potentially have capsules.
What kind of spore can ravage a hospital?
Clostridium
Obligate anaerobe
Super hard to get rid of
What kind of bacteria have spores?
Only gram positive
What do spores do for bacteria?
Protect from heat, radiation, and chemical/enzyme attacks
Which pathogenic bacteria produce spores?
Bacillus
Clostridium
What is the starter molecule for peptidoglycan synthesis?
NAG
What is a colony forming unit?
Estimate of the number of living cells
What is used to create divisions within bacteria?
Proteins
What is an operon?
Two or more genes are controlled by ONE promoter –> polycistrionic mRNA
Only found in prokaryotes
What are the terminal electron acceptors for bacterial anaerobic respiration?
Metals (nitrate, sulfate, etc)
Most human pathogens are ______ an/aerobes
Facultative anaerobes
Describe the components of an operon.
Operon = encodes multiple genes, but controlled by one promoter
Operator = segment of DNA that is located adjacent to a promoter and usually binds a repressor protein
Promoter = RNA pol binds here to translate the operon
How do bacteria become resistant to antibiotics?
Through genetic mutation
Why are mutations easy to see in bacteria?
Bacterial genome is haploid, therefor unable to mask mutations
What structural component of bacteria is the functional equivalent of most of the organelles in a eukaryotic cell?
The cell membrane
How do you clinically differentiate and ID bacteria?
- Morphology and gram stain
- Growth condition/abilities
- ID products of metabolism
- Simple chemical or enzymatic tests
- Molecular techniques (RFLP, sequencing, etc)
What is ribotyping and what are the pros/cons of using it?
Form of sequencing bacteria. Genes that code for ribosomal RNA are cut and separated by electrophoresis. The resulting fingerprint is visualized with fluorescent probes.
Pros:
rapid
reproducible
works for a wide range of bacterial specieis
Cons:
expensive
How do you clinically differentiate between strains of bacteria?
Molecular techniques are powerful, but they cannot differentiate between strains. Must use basic chemical/enzymatic tests to ID strains.
How is transcription controlled in an operon?
Transcription initiation controlled by the -35 and -10 box, found in the promoter region (RNA pol binding site)
Which mechanisms produce genetic change in bacteria?
- Rapid mutation rate, rapid generation time
2. DNA acquisition from environment or other bacteria/organisms
What is a silent mutation?
Base substitution in DNA that has no effect on the polypeptide produced. Can still have significant effect on gene expression due to changing mRNA stability.
What is the main difference between transposons and insertion sequences?
Transposons can pick up and carry other genes with them (e.g. antibiotic resistance). Insertion sequences cannot.
What is pathogenicity?
Ability of an organism to gain entry into a host’s tissues and bring about an anatomic or physiological change
What is virulence?
Degree of pathogenicity of a parasite
What are three virulence factors?
- Structural (cell wall, capsule, pili)
- Biochemical (exotoxins, enzymes)
- Genetic (plasmids, phages)
What is bacterial competence?
Ability of bacterium to take up naked DNA from the environment
What are two examples of adherence factors?
Adhesins (surface projections) and biofilms (aggregate of microorganisms in which cells adhere to each other and resist clearance)
How does Neisseria gonorrhea protect against antibodies?
By producing anti-IgA proteases
Which cells are the number one responders to infection?
Neutrophils
What are the five main mechanisms of exotoxins?
- Inhibit [protein synthesis]
- Hyperactivate [cellular proteins]
- Form [pores in cellular membranes]
- Interfere [with nerve transmission]
- Activate [T-cells nonspecifically]
What are bactericidal antibiotics?
Antibiotics that target the cell wall, causing lysis.
What are examples of bactericidal drugs?
Beta lactams
Vancomycin
Daptomycin (cell membrane only)
What are bacteriostatic antibiotics?
Inhibit bacterial growth and/or replication.
What are the classes of bacteriostatic antibiotics?
Abx that inhibit RNA synthesis
Abx that block protein synthesis
Abx that target DNA or DNA synthesis
Antimetabolite abx
Antibiotic that inhibits RNA synthesis
Rifamycin
Abx that block protein synthesis
Aminoglycosides
Macrolides
Tetracyclines
Abx that target DNA/DNA synthesis
Quinolones
Metronidazole
Antimetabolite abx
Trimethoprim-sulfamethoxazole
What are the gram positive and negative Beta Lactams?
Penicillins
Cephalosporins
Carbapenems
Monobactams
What are the gram positive cocci Beta Lactams?
Vancomycin
Daptomycin
What are the TB drugs?
Isoniazid
Ethambutol
Pyrazinamide
What are the classes of penicillins?
Natural penicillins
Anti-staphylococcal penicillins
Aminopenicillins
Extended spectrum penicillins
What are the natural penicillins?
V and G
What are the anti-staphylococcal penicillins?
Nafcillin
Oxacillin
Dicloxacillin
What are the aminopenicillins?
Ampicillin
Amoxicillin
What are the extended spectrum penicillins?
Piperacillin
Ticarcillin
Carbenicillin