Michaelmas week 5 Flashcards

1
Q

Describe peptidoglycan briefly

A

It is the largest macromolecule in a bacterial cell
It consists of linear polysaccharide strands made of n-acetyl muramyl peptide and N-acetyl glucosamine linked by beta-1,4 glycosidic bonds

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2
Q

How does peptidoglycan get strength?

A

From peptide cross linking between different polysaccharide strands

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3
Q

What is peptidoglycan’s function?

A

To protect the bacteria against high internal osmotic pressure

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4
Q

Penicillin…

A

Inhibits peptidoglycan synthesis

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5
Q

Who found lysozyme and where?

A

Fleming, in tears

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6
Q

Where is lysozyme found?

A

Ruminants guts and egg white (stops bacteria invading eggs)

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7
Q

What is the difference between penicillin and lysozyme?

A

Lysozyme digests existing bacterial peptidoglycan by hydrolysing its polysaccharide backbone into disaccharides that still have peptide units attached
Bacteria lyse when their structural integrity is lost

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8
Q

What is more sensitive to lysozyme, gram positive or negative?

A

Positive because there is no protective membrane that can cover peptidoglycan

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9
Q

In our experiement what bacteria did we look at, was it gram +ve or -ve?

A

M. Luteus, gram positive

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10
Q

How can we look at lysozyme effects on M. Luteus?

A

At first M.Luteus suspension is opaque because it scatters light
When cell wall is removed light scattering decreases
Enzyme causes apparent drop in absorbance on spectrophotometer

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11
Q

Do light scattering measurement follow Beer-Lamberts law?

A

No, not like absorbance

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12
Q

Draw graph of attenuance vs. mg M. Luteus in assay

Graph od OD600 vs. time

A

(See notes for diagram)

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13
Q

OD600=?

A

Apparent absorbance 600

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14
Q

Why is the lysozyme curve exponential?

A

As walls are attacked they disintegrate into pieces that scatter much less light than the original cells
Fragments could be substrates for lysozyme but further digestion is invisible to the assay

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15
Q

Draw a graph of rate of change of OD600 vs enzyme micrograms in 3ml assay

A

(See notes for diagram)

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16
Q

What is lysozyme optimum pH?

A

Around 6

17
Q

Describe lysozyme heat stability

What buffer do you heat it in?

A

If enzyme is heated for 10 minutes in a phosphate/citrate buffer, cooled and assayed it survives at 50,60 and 70 degrees
It loses half its activity at 80 and nearly all at 90

18
Q

Why is lysozyme very stable?

Where is this a common feature?

A

It contains -S-S- bridges

This is a common feature in enzymes designed to work outside cells in an unfriendly environment

19
Q

What happens if lysozyme is heated with DTT, what does this show?

A

DTT reduces disulphide bridge, enzyme killed

Shows heat stability is due to cross-linked cysteine residues

20
Q

If you add DTT and SDS what happens?

A

SDS stops the protein unfolding so there is no aggregation

21
Q

Draw results table for DTT and SDS

A

(See notes for diagram)