Mendel, DNA to RNA to Proteins Flashcards

1
Q

the “blending” hypothesis

A

The idea that genetic material from the two parents blends together (like blue and yellow paint blend to make green).

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2
Q

the “particulate” hypothesis

A

The idea that parents pass on discrete heritable units (genes).

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3
Q

character and trait

A

A heritable feature that varies among individuals (such as flower color).

Each variant for a character, such as purple or white color for flowers.

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4
Q

Mendel discovered the basic principles of heredity by breeding garden peas in carefully planned experiments.

Other advantages of using peas? (3)

A

Short generation time.

Large numbers of offspring.

Mating could be controlled; plants could be allowed to self-pollinate or could be cross-pollinated.

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5
Q

true-breeding

A

Mendel chose to track only those characters that occurred in two distinct alternative forms.

He also started with varieties that were true-breeding (plants that produce offspring of the same variety when they self-pollinate).

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6
Q

hybridization

A

In a typical experiment, Mendel mated two contrasting, true-breeding varieties.

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7
Q

P generation

A

The true-breeding parents.

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8
Q

F1 generation

A

The hybrid offspring of the P generation.

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9
Q

F2 generation

A

It’s produced when F1 individuals self-pollinate or cross-pollinate with other F1 hybrids.

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10
Q

The Law of Segregation (7)

A

When Mendel crossed contrasting, true-breeding white- and purple-flowered pea plants, all of the F1 hybrids were purple.

When Mendel crossed the F1 hybrids, many of the F2 plants had purple flowers, but some had white.

Mendel discovered a ratio of about three purple flowers to one white flower in the F2 generation.

Mendel reasoned that only the purple flower factor was affecting flower color in the F1 hybrids.

Mendel called the purple flower color a dominant trait and the white flower color a recessive trait.

The factor for white flowers was not diluted or destroyed because it reappeared in the F2 generation.

Heritable factor” is what we now call a gene.

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11
Q

Mendel’s Model

A

Mendel developed a hypothesis to explain the 3:1 inheritance pattern he observed in F2 offspring.

Four related concepts make up this model.

These concepts can be related to what we now know about genes and chromosomes.

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12
Q

Mendel’s Model: 1

A

Alternative versions of genes account for variations in inherited characters.

For example, the gene for flower color in pea plants exists in two versions, one for purple flowers and the other for white flowers.

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13
Q

alleles

A

Alternative versions of a gene.

Each gene resides at a specific locus on a specific chromosome.

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14
Q

Mendel’s Model: 2

A

For each character, an organism inherits two alleles, one from each parent.

The two alleles at a particular locus may be identical, as in the true-breeding plants of Mendel’s P generation.

Or the two alleles at a locus may differ, as in the F1 hybrids.

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15
Q

Mendel’s Model: 3

A

If the two alleles at a locus differ, then one (the dominant allele) determines the organism’s appearance, and the other (the recessive allele) has no noticeable effect on appearance.

In the flower-color example, the F1 plants had purple flowers because the allele for that trait is dominant.

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16
Q

Mendel’s Model: 4

A

The law of segregation: the two alleles for a heritable character separate (segregate) during gamete formation and end up in different gametes.

Thus, an egg or a sperm gets only one of the two alleles that are present in the organism.

This segregation of alleles corresponds to the distribution of homologous chromosomes to different gametes in meiosis.

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17
Q

Punnett square

A

The model accounts for the 3:1 ratio observed in the F2 generation of Mendel’s crosses.

Possible combinations of sperm and egg can be shown using a Punnett square.

A capital letter represents a dominant allele, and a lowercase letter represents a recessive allele.

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18
Q

homozygote and heterozygote

A

An organism with two identical alleles for a character.

It is said to be homozygous for the gene controlling that character.

An organism with two different alleles for a gene is a heterozygote and is said to be heterozygous for the gene controlling that character.

Unlike homozygotes, heterozygotes are not true-breeding.

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19
Q

An organism’s traits do not always reveal its genetic composition.

phenotype and genotype

A

Therefore, we distinguish between an organism’s phenotype, or physical appearance, and its genotype, or genetic makeup.

In the example of flower color in pea plants, PP and Pp plants have the same phenotype (purple) but different genotypes.

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20
Q

phenotype

A

An organism’s phenotype includes its physical appearance, internal anatomy, physiology, and behavior.

An organism’s phenotype reflects its overall genotype and unique environmental history.

21
Q

New Combinations of Alleles: Variation for Natural Selection

A

Recombinant chromosomes bring alleles together in new combinations in gametes.

Random fertilization increases even further the number of variant combinations that can be produced.

This abundance of genetic variation is the raw material upon which natural selection works.

22
Q

Life’s Operating Instructions

A

In 1953, James Watson and Francis Crick introduced an elegant double-helical model for the structure of deoxyribonucleic acid, or DNA.

Hereditary information is encoded in DNA and reproduced in all cells of the body.

This DNA program directs the development of biochemical, anatomical, physiological, and (to some extent) behavioural traits.

23
Q

DNA replication

A

DNA is copied during DNA replication, and cells can repair their DNA.

24
Q

The discovery of the genetic role of DNA began with research by Frederick Griffith in 1928.

Griffith worked with two strains of a bacterium, one pathogenic and one harmless.

transformation

A

When he mixed heat-killed remains of the pathogenic strain with living cells of the harmless strain, some living cells became pathogenic.

He called this phenomenon transformation, now defined as a change in genotype and phenotype due to assimilation of foreign DNA.

Later work by Oswald Avery, Maclyn McCarty, and Colin MacLeod identified the transforming substance as DNA.

25
Q

Evidence That Viral DNA Can Program Cells:
More evidence for DNA as the genetic material came from studies of viruses that infect bacteria
.
bacteriophages (or phages)

virus

A

Such viruses, called bacteriophages (or phages), are widely used in molecular genetics research.

A virus is DNA (sometimes RNA) enclosed by a protective coat, often simply protein.

26
Q

DNA is made up of?

DNA
nucleotide is made up of?

Nitrogenous bases are?

A

Sugar–phosphate
backbone and Nitrogenous bases.

Phosphate
group, Sugar
(deoxyribose), and Nitrogenous base.

Adenine (A) and Thymine (T).
Cytosine (C) and Guanine (G).

Ribose is the sugar in RNA (one OH bond)
Uracil (U) is in RNA instead of Thymine (T).

Purines are G and A. (two rings)
Pyrimidines are C, T, and U. (single rings)

27
Q

double helix

A

DNA molecule was made up of two strands.

28
Q

The Basic Principle: Base Pairing to a Template Strand

A

Since the two strands of DNA are complementary, each strand acts as a template for building a new strand in replication.

In DNA replication, the parent molecule unwinds, and two new daughter strands are built based on base-pairing rules.

29
Q

Evolutionary Significance of Altered DNA Nucleotides

A

The error rate after proofreading and repair is low but not zero.

Sequence changes may become permanent and can be passed on to the next generation.

These changes (mutations) are the source of the genetic variation upon which natural selection operates and are ultimately responsible for the appearance of new species.

30
Q

A chromosome consists of a DNA molecule packed together with proteins

A

The bacterial chromosome is a double-stranded, circular DNA molecule associated with a small amount of protein.

Eukaryotic chromosomes have linear DNA molecules associated with a large amount of protein.

In a bacterium, the DNA is “supercoiled” and found in a region of the cell called the nucleoid.

31
Q

chromatin and histones

A

In the eukaryotic cell, DNA is precisely combined with proteins in a complex .

Chromosomes fit into the nucleus through an elaborate, multilevel system of packing.

Proteins called histones are responsible for the first level of packing in chromatin.

32
Q

The Flow of Genetic Information

A

The information content of genes is in the specific sequences of nucleotides.

The DNA inherited by an organism leads to specific traits by dictating the synthesis of proteins.

Proteins are the links between genotype and phenotype.

33
Q

gene expression

A

The process by which DNA directs protein synthesis, includes two stages: transcription and translation.

34
Q

Evidence from the Study of Metabolic Defects

A

In 1902, British physician Archibald Garrod first suggested that genes dictate phenotypes through enzymes that catalyze specific chemical reactions.

He thought symptoms of an inherited disease reflect an inability to synthesize a certain enzyme.

Cells synthesize and degrade molecules in a series of steps, a metabolic pathway.

35
Q

Nutritional Mutants in Neurospora: Scientific Inquiry

A

George Beadle and Edward Tatum exposed bread mold to X-rays, creating mutants that were unable to survive on minimal media.

Their colleagues Adrian Srb and Norman Horowitz identified three classes of arginine-deficient mutants.

Each lacked a different enzyme necessary for synthesizing arginine.

The results of the experiments provided support for the one gene–one enzyme hypothesis.

The hypothesis states that the function of a gene is to dictate production of a specific enzyme.

36
Q

Transcription and Translation

A

Transcription is the synthesis of RNA using information in DNA.

Transcription produces messenger RNA (mRNA).

Translation is the synthesis of a polypeptide, using information in the mRNA.

Ribosomes are the sites of translation.

37
Q

primary transcript

A

A primary transcript is the initial RNA transcript from any gene prior to processing.

The central dogma is the concept that cells are governed by a cellular chain of command: DNA → RNA → protein.

38
Q

Codons: Triplets of Nucleotides

A

The flow of information from gene to protein is based on a triplet code: a series of nonoverlapping, three-nucleotide words.

The words of a gene are transcribed into complementary nonoverlapping three-nucleotide words of mRNA.

These words are then translated into a chain of amino acids, forming a polypeptide.

39
Q

template strand

A

One of the two DNA strands, the template strand, provides a template for ordering the sequence of complementary nucleotides in an RNA transcript.

The template strand is always the same strand for a given gene.

The strand used as the template is determined by the orientation of the enzyme that transcribes the gene.

This in turn, depends on the DNA sequences associated with the gene.

40
Q

codons

A

During translation, the mRNA base triplets, called codons, are read in the 5′ → 3′ direction.

The nontemplate strand is called the coding strand because the nucleotides of this strand are identical to the codons, except that T is present in the DNA in place of U in the RNA.

Each codon specifies the amino acid (one of 20) to be placed at the corresponding position along a polypeptide.

41
Q

Cracking the Code

A

Of the 64 triplets, 61 code for amino acids; 3 triplets are “stop” signals to end translation.

The genetic code is redundant (more than one codon may specify a particular amino acid) but not ambiguous; no codon specifies more than one amino acid.

Codons must be read in the correct reading frame (correct groupings) in order for the specified polypeptide to be produced.

42
Q

Ribozymes

A

Catalytic RNA molecules that function as enzymes and can splice RNA.

The discovery of ribozymes rendered obsolete the belief that all biological catalysts were proteins.

43
Q

Three properties of RNA enable it to function as an enzyme:

A

It can form a three-dimensional structure because of its ability to base-pair with itself.

Some bases in RNA contain functional groups that may participate in catalysis.

RNA may hydrogen-bond with other nucleic acid molecules.

44
Q

The Structure and Function of Ribosomes

A

Ribosomes facilitate specific coupling of tRNA anticodons with mRNA codons in protein synthesis.

The two ribosomal subunits (large and small) are made of proteins and ribosomal RNA (rRNA).

Bacterial and eukaryotic ribosomes are somewhat similar but have significant differences.

Some antibiotic drugs specifically target bacterial ribosomes without harming eukaryotic ribosomes.

In eukaryotes, the nuclear envelope separates the processes of transcription and translation.

RNA undergoes processing before leaving the nucleus.

45
Q

Mutations

A

Changes in the genetic information of a cell.

46
Q

Point mutations

A

Changes in just one nucleotide pair of a gene.

The change of a single nucleotide in a DNA template strand can lead to the production of an abnormal protein.

47
Q

Mutagens

A

Physical or chemical agents that can cause mutations.

Chemical mutagens fall into a variety of categories.

Most carcinogens (cancer-causing chemicals) are mutagens, and most mutagens are carcinogenic.

48
Q

What Is a Gene?

A

We have considered a gene as:

a discrete unit of inheritance

a region of specific nucleotide sequence in a chromosome

a DNA sequence that codes for a specific polypeptide chain

A gene can be defined as a region of DNA that can be expressed to produce a final functional product that is either a polypeptide or an RNA molecule.