Membrane Structure and Function - Week 20 Flashcards

You may prefer our related Brainscape-certified flashcards:
1
Q

what is the main role of membranes

A

Membranes play a crucial role in the compartmentalization of cells and organelles, providing a barrier that separates the internal cellular environment from the external environment and creating distinct compartments within the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what are membranes made of

A

Membranes are composed of lipids, primarily phospholipids, which form a bilayer structure with hydrophobic tails facing inward and hydrophilic heads facing outward. This lipid bilayer provides a selectively permeable barrier that controls the passage of molecules in and out of the cell or organelles.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what cell mechanism involve membrane function

A
  • Cytoplasmatic membrane
  • Nuclear envelope
  • Mitochondria, chloroplast
    peroxisomes
  • Endoplasmic reticulum (ER)
  • Golgi Apparatus
  • Vesicles
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what is the lipid bilayer

A

lipid bilayer is primarily composed of phospholipids and serves as a permeability barrier.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what are transmembrane proteins and what is there function

A

Transmembrane proteins are proteins that span across the lipid bilayer, with parts of the protein exposed on both the cytoplasmic and extracellular sides of the membrane. Some transmembrane proteins, such as adhesion proteins, help anchor the cell membrane to the extracellular matrix or other cells, providing structural stability and facilitating cell-cell interactions.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

what are cell membrane receptors and what do they regulate

A

Cell membrane receptors are proteins that can bind to specific molecules, such as hormones, neurotransmitters, or signaling molecules from other cells, and transmit signals into the cell to regulate various cellular processes, including cell growth, metabolism, and response to environmental stimuli.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what is the cytoskeleton and why does transmembrane proteins interact with the cytoskeleton

A

The cytoskeleton is a network of protein filaments inside the cell that provides structural support, helps maintain cell shape, and enables cell movement. Transmembrane proteins can interact with the cytoskeleton, transmitting forces to contribute to cell motility and mechanical stability.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

what do proteins that function as enzymes and are driven by ATP do

A

some membrane proteins can function as enzymes that are driven by ATP, such as ATPases that actively transport ions across the membrane, maintaining the electrochemical gradient essential for many cellular processes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

what ions pumps are in the plasma membrane and why are they essential

A

The plasma membrane contains ion pumps, such as the sodium-potassium pump, that actively transport ions, such as Na+ (sodium) out of the cell and K+ (potassium) into the cell, against their concentration gradients. This creates and maintains ion concentration gradients across the lipid bilayer, which are essential for various cellular processes, including nerve impulses, muscle contractions, and nutrient uptake.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what are transmembrane carrier proteins and what is there function

A

Transmembrane carrier proteins are proteins embedded in the plasma membrane that use the ion concentration gradients established by ion pumps to transport nutrients and other molecules into the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what are selective channels and what is there function

A

Selective ion channels are Ion channels which are proteins that form pores in the plasma membrane, allowing specific ions to pass through and regulate the electrical potential across the membrane. They play a critical role in maintaining the resting membrane potential, which is essential for nerve impulses and muscle contractions, among other cellular processes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what is the function of receptors in the plasma membrane

A

The plasma membrane contains a variety of receptors that can bind to specific extracellular ligands, such as hormones, neurotransmitters, or signaling molecules from other cells. These receptors transmit signals across the membrane and into the cytoplasm, initiating cellular responses and regulating various cellular processes, including cell growth, metabolism, and differentiation.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what is the nuclear envelope

A

The nuclear envelope is a double membrane that surrounds the nucleus in eukaryotic cells and serves as a physical barrier between the nuclear contents and the cytoplasm. It consists of an outer nuclear membrane and an inner nuclear membrane, which are connected at nuclear pores that span both membranes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what are nuclear pores and what is there function

A

Nuclear pores are protein channels that span both the outer and inner nuclear membranes and serve as gateways for the transport of molecules, including proteins, ribosomal subunits, and mRNAs, into and out of the nucleus. Nuclear pores are selective and tightly regulated, allowing specific molecules to pass through based on their size, shape, and signals.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what does nuclear-cytoplasmic signaling regulate

A

The nuclear envelope serves as a platform for nuclear-cytoplasmic signaling, as it contains proteins and signaling pathways that can relay signals between the nucleus and the cytoplasm. These signaling pathways can regulate various cellular processes, including development, growth, and response to environmental cues.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

what is nucleolus and how is it organised

A

The nucleolus is a distinct region within the nucleus where ribosomes are assembled. The nuclear envelope plays a role in organizing the nucleolus by allowing the transport of ribosomal proteins and other necessary molecules into the nucleolus through the nuclear pores.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

what did the fluid mosaic model propose

A

The fluid mosaic model, proposed by Singer and Nicolson in 1972, describes the plasma membrane as a fluid lipid bilayer with embedded proteins that are constantly moving and interacting with each other. The lipid bilayer is composed of phospholipids, which have hydrophilic (water-loving) heads and hydrophobic (water-repelling) tails, and forms a fluid, flexible barrier that separates the cytoplasm from the extracellular environment.

The fluidity and dynamic nature of the plasma membrane allow cells to respond to changes in their environment, communicate with other cells, and maintain their overall function and integrity.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

what are the various proteins are in the plasma membrane and what is their function

A

The plasma membrane also contains various proteins, including receptors, channels, and pumps, that play critical roles in the dynamic regulation of cellular processes.

  • Receptors are proteins that bind to specific molecules, such as hormones or neurotransmitters, on the cell surface and transmit signals into the cell to initiate cellular responses.
  • Channels are proteins that form pores or channels in the membrane, allowing for the selective passage of ions or other molecules across the membrane.
  • Pumps are proteins that use energy, usually from ATP, to actively transport molecules across the membrane against their concentration gradients.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

what state are the proteins in the plasma membrane in

A

These proteins are not static, but rather are constantly moving state and changing their conformation, allowing for dynamic regulation of cellular processes such as signal transduction, nutrient uptake, and waste removal.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

why might lipids attach to membranes

A

Lipids, such as glycolipids and lipid anchors, can attach to the membranes and serve as attachment points for proteins. This allows proteins to be positioned at specific locations in the membrane, where they can perform their functions, such as signal transduction, cell adhesion, and membrane trafficking.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

how are lipids stored in organisms

A

Lipids, such as triglycerides, are an important form of energy storage in organisms. They are stored in specialized cells called adipocytes in the form of fat droplets and can be broken down to release energy when needed, providing a source of fuel for cellular processes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

which lipids can act as signaling molecules and what is there function

A

Lipids, such as steroid hormones and phospholipids, can act as signaling molecules that carry information within and between cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

which lipids can act as intracellular second messengers and what do they regulate

A

Phospholipids, such as phosphatidylinositol, can also act as intracellular second messengers, mediating signal transduction pathways and regulating cellular responses to stimuli.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

what are the 3 different types of lipids

A
  • Phosphoglycerides
  • Sphingolipids
  • Sterols
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q

what are Amphiphilic lipids structure and what are they made up of

A

Amphiphilic lipids, such as phosphoglycerides and sphingolipids, spontaneously self-assemble into ordered structures in an aqueous environment, forming lamellar bilayers. These bilayers consist of two leaflets, which are two layers of lipids arranged in such a way that the hydrophobic (non-polar) fatty acid chains are oriented towards the interior of the bilayer, while the polar head groups are exposed to the surrounding water.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q

what is the basic structure of phosphoglycerides

A

The basic structure of phosphoglycerides consists of three parts:

  1. Glycerol backbone: Phosphoglycerides have a three-carbon backbone of glycerol, which serves as the structural scaffold for the lipid molecule.
  2. Fatty acid chains: Two long-chain fatty acids are esterified to the hydroxyl groups on carbons 1 and 2 (C1 and C2) of the glycerol backbone. Fatty acids are hydrophobic, consisting of a long chain of carbon and hydrogen atoms, and provide the lipid bilayer with its hydrophobic properties.
    3.Phosphoric acid and polar head group: A phosphoric acid group is esterified to the C3 hydroxyl group of glycerol, forming a phosphoester bond. Attached to the phosphoric acid group is a polar head group, which can vary in structure and charge depending on the specific type of phosphoglyceride. The polar head group is hydrophilic, meaning it is attracted to water.

The combination of the hydrophobic fatty acid chains and the hydrophilic polar head group gives phosphoglycerides their amphiphilic nature, making them ideal for forming lipid bilayers in aqueous environments.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q

how are phosphoglycerides synthesised

A

Phosphoglycerides are synthesized through a complex series of enzymatic reactions that involve the addition of fatty acids and a phosphate group to glycerol, followed by esterification to form the final phosphoglyceride molecule. Different enzymes and pathways are involved in the synthesis of various types of phosphoglycerides, resulting in the diverse array of phosphoglyceride species found in biological membranes, each with unique functions and properties.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q

what are phospholipids composed of

A

Phospholipids are composed of alcohols (specifically, glycerol) and fatty acids.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q

what are Sphingolipids and what do they act as

A

Sphingolipids are a class of lipids that derive their name from sphingosine, which is a nitrogen-containing base synthesized from serine and a fatty acid. Sphingosine acts as the structural counterpart of glycerol plus one fatty acid in phosphoglycerides.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
30
Q

where are sphingolipds found

A

One notable feature of sphingolipids is that they are often found in higher abundance in the plasma membrane, which is the outer membrane of the cell, compared to membranes inside the cell. This is especially true for thicker plasma membranes, such as those found in nerve cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
31
Q

what are glycosphingolipids and what is there function

A

Sphingolipids can have various head groups, including sugars, which give rise to glycosphingolipids. Glycosphingolipids are sphingolipids that contain one or more sugars as their head groups. These sugars can be simple or complex carbohydrates, and the presence of sugars in the head groups of glycosphingolipids plays a role in cell recognition and cell-cell communication processes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
32
Q

what kind of chain length does sphingolipids have in comparison to most phosphoglycerides

A

The longer chain length of sphingolipids compared to most phosphoglycerides is another distinguishing feature. Sphingolipids have a long fatty acid chain attached to the sphingosine backbone, which contributes to their unique structural properties and functional roles in biological membranes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
33
Q

where is cholesterol found and why is it needed

A

Cholesterol is the major sterol found in animal plasma membranes, although it is also present in lower concentrations in internal membranes. It is an essential component of cell membranes and is involved in regulating their fluidity and permeability. Cholesterol molecules are interspersed among the phospholipids in the lipid bilayer, where they interact with the fatty acid chains of phospholipids and help to maintain the integrity and stability of the membrane.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
34
Q

how does cholesterol regulate membrane fluidity and stability

A

The rigid structure of the sterol nucleus, which includes a four-ring structure, tends to order the fluid bilayers in the region between carbon 1 and carbon 10 of the fatty acids. Additionally, cholesterol has a wedge-like shape, which promotes motion of the fatty acyl chains deeper in the bilayer, thereby reducing the fluidity of the membrane in that region. This unique property of cholesterol helps to modulate the fluidity and flexibility of the membrane, making it more resistant to changes in temperature and mechanical stress.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
35
Q

how does cholesterol play a role in metabolism

A

Cholesterol also plays a crucial role in metabolism as it is situated at the crossroads of several metabolic pathways. It serves as a precursor molecule for the synthesis of various important compounds, including steroid hormones such as estrogen, testosterone, and cortisol. These hormones play key roles in regulating various physiological processes in the body, such as growth, development, and immune response.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
36
Q

what % is the plasma membrane of animal cells is cholesterol and sphingolipids

A

The plasma membranes of animal cells are composed of approximately 35% cholesterol and more than 10% sphingolipids, in addition to a variety of phosphoglycerides.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
37
Q

how are lipids distributed in the lipid bilayer and why is this important

A

One important characteristic of biological membranes is their asymmetric lipid distribution. Lipids are not evenly distributed between the two halves, or leaflets, of the lipid bilayer. Instead, specific types of lipids are enriched in one leaflet compared to the other. This lipid asymmetry is important for the proper functioning of cellular processes, such as cell signaling and membrane trafficking.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
38
Q

what lipids are known to be stable and impermeable to polar or charged compounds and what is its function

A

Phosphoglycerides, which are the main type of lipids in biological membranes, are known to be stable and impermeable to polar or charged compounds, even small ions such as Na+ or Cl-. This property helps to maintain the integrity and selective permeability of the membrane, allowing it to function as a barrier that regulates the movement of substances in and out of the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
39
Q

what is the lipid transport system and what is its main role

A

Although lipid molecules in membranes are not soluble in water, cytoplasmic lipid-binding proteins can selectively interact with specific lipids from the membrane and transport them to other membranes within the cell. This is called the lipid transport system. This lipid transport system plays a critical role in maintaining the proper lipid composition and distribution in cellular membranes, which is essential for their normal functioning.

40
Q

what are the 2 types of membrane proteins and where are they found

A
  1. integral proteins are directly embedded in the lipid bilayer and are surrounded by the hydrophobic core of the membrane
  2. Whereas peripheral proteins are associated with the surfaces of the membrane and do not have hydrophobic transmembrane domains.
41
Q

where are intergral proteins found and what kind of transmembrane domains do they have

A

Integral proteins, on the other hand, are embedded within the lipid bilayer and have hydrophobic transmembrane domains that allow them to span across the membrane.

42
Q

what kind of structures are found in integral proteins

A

integral proteins can have different structures, including single helices or helical bundles, and beta barrels which are common in channel proteins.

43
Q

what kind of junctions can membrane proteins serve as

A

Membrane proteins can serve as junctions that connect and join two cells together, forming tight junctions, desmosomes, or gap junctions.

44
Q

what is the function of membrane proteins that act as enzymes

A

Some membrane proteins function as enzymes that catalyze specific biochemical reactions. These enzymes may be involved in metabolic pathways, and their localization to the membrane can help compartmentalize these pathways and regulate their activity.

45
Q

how do membrane proteins transport ions, molecules and nutrients across the cell membrane

A

Membrane proteins are crucial for the transport of ions, molecules, and nutrients across the cell membrane. How they can carry out this transportation is they can facilitate the diffusion of molecules across the membrane through facilitated diffusion or actively transport molecules against their concentration gradient through active transport. These proteins are often specific to certain molecules or ions and play a critical role in maintaining cellular homeostasis.

46
Q

why may membrane proteins function as markers

A

Membrane proteins can function as markers for cellular identification, Thus helping cells recognize and interact with each other.

47
Q

why do membrane proteins serve as attachment points for the cytoskeleton and extracellular matrix

A

Membrane proteins can serve as attachment points for the cytoskeleton and extracellular matrix so that they can provide structural support and stability to the cell.

48
Q

why do membrane proteins anchor the cytoskeleton inside the cell or interact with the extracellular matrix

A

membrane proteins can anchor the cytoskeleton inside the cell or interact with the extracellular matrix outside the cell so they can help cells maintain their shape, polarity, and integrity.

49
Q

what kind of signalling molecules does the membrane proteins that act as receptors interact with and what do they regulate

A

Membrane proteins can function as receptors for various signaling molecules, such as peptide hormones, neurotransmitters, or growth factors. These receptors transmit signals from the extracellular environment to the inside of the cell, triggering intracellular signaling pathways and they thus regulate cell behavior, metabolism, and gene expression.

50
Q

what are pumps and what is there function

A

Pumps, also known as primary active transporters, are membrane proteins that use energy from ATP, light, or other sources to actively transport ions or other solutes across cell membranes against their concentration gradient. This process requires the input of energy to move substances from a region of lower concentration to a region of higher concentration

51
Q

why are pumps important

A

Pumps are important for maintaining cellular homeostasis and are involved in a variety of physiological processes, such as nutrient uptake, waste removal, and ion regulation.

52
Q

where are pumps found

A

They are found in various types of cells, including those in animals, plants, and bacteria.

53
Q

what are carriers and how do they facilitate movement of ions or solutes

A

Carriers are a type of membrane protein that are involved in facilitated diffusion, which is a form of passive transport. carriers facilitate the movement of ions or solutes along their concentration gradient without the need for ATP hydrolysis.

54
Q

why are carriers known as secondary transporters

A

Carriers are also known as secondary transporters because their activity is dependent on the presence of a pre-existing gradient of another molecule, such as an ion or solute.

55
Q

why do carriers undergo conformational changes

A

Carriers work by undergoing conformational changes in response to the binding of specific molecules on one side of the membrane, which allows the molecules to be transported across the membrane and released on the other side. These conformational changes can occur in a regulated manner, allowing carriers to selectively transport specific ions or solutes across the membrane in response to cellular signals or environmental conditions.

56
Q

what are channels and what do they do

A

Channels are a type of membrane protein that form ion-specific pores in the cell membrane and allow for the passive transport of ions across the membrane down their electrochemical gradient, without the need for energy input such as ATP. Channels are highly selective and tightly regulated, allowing only specific ions to pass through their pores based on their size, charge, and other properties.

57
Q

why are channels opening and closing and why is it regulated

A

Channels can open and close in response to various cellular signals or environmental conditions, and this regulated opening and closing of channels allows for precise control of ion movement across the membrane.

58
Q

what are the 2 different ways that channels open and open

A

Channels can be either voltage-gated, meaning their opening and closing is controlled by changes in membrane potential, or ligand-gated, meaning their opening and closing is controlled by the binding of specific molecules (ligands) to the channel.

59
Q

what time of movement is the movement of ions through channels and what is the function of channels

A

The movement of ions through channels is passive, meaning it occurs along their electrochemical gradient, which is determined by the combined effect of the ion’s concentration gradient and the electrical potential across the membrane. Channels play a crucial role in many physiological processes, including nerve transmission, muscle contraction, hormone secretion, and cell signaling.

60
Q

what is Bacteriorhoodopsin and what is it a unique example of

A

Bacteriorhodopsin is a type of membrane protein found in halophilic (salt-loving) Archaea, specifically in Halobacterium halobium, that is involved in light-driven transport of protons across the plasma membrane. It is a unique example of a pump that converts light energy into a proton gradient, which can be used by the cell for various physiological processes.

61
Q

how does Bacteriorhodopsin absorb light which leads to comformational changes and results in transfer of protein across the membrane against their concentration gradient

A

Bacteriorhodopsin consists of a bundle of seven alpha-helices that span the membrane, creating a pathway for protons to move through the protein. The protein contains a retinal molecule that acts as a light-absorbing pigment. When retinal absorbs light, it undergoes a conformational change that is transmitted to the protein, leading to structural changes that favor the transfer of protons across the membrane, against their concentration gradient.

62
Q

what kind of transport is light-driven transport of protons by bacteriorhodopsin and why

A

The light-driven transport of protons by bacteriorhodopsin is a form of primary active transport. this is because it requires energy input from light to drive the movement of protons against their concentration gradient. The transfer of protons creates a proton gradient across the plasma membrane, with a higher concentration of protons on one side of the membrane compared to the other.

63
Q

what can the photon gradient created by bacteriorhohopsin be used for

A

The proton gradient can be used by the cell to generate ATP, the energy currency of cells, through a process called chemiosmosis.

64
Q

what is ATPase and what its function

A

ATPases are enzymes that utilize the energy stored in ATP (adenosine triphosphate) to perform work within cells. They play critical roles in cellular energy metabolism and are involved in a variety of physiological processes.

65
Q

what is oxidative phosphorylation and where does it occur

A

One of the main functions of ATPases is to utilize proton gradients across cellular membranes to synthesize ATP. This process, known as oxidative phosphorylation or photophosphorylation, occurs in the mitochondria of eukaryotic cells or in the plasma membrane of prokaryotic cells, such as bacteria. Also, ATPases that use proton gradients to synthesize ATP are often referred to as ATP synthases.

66
Q

what do ATP synthase consist of and where are the motors located and what is there function

A

ATP synthases, specifically rotary ATPases, are complex enzymes consisting of two rotary motors, referred to as F1 and Fo. The F1 motor is located in the cytoplasm and is responsible for synthesizing ATP, while the Fo motor is embedded in the membrane and is responsible for conducting protons across the lipid bilayer.

67
Q

how does Fo acts as a proton channel and how is F1 motor rotated and what does F1 rotation result in

A

The Fo motor acts as a proton channel, as it allows protons to flow down their electrochemical gradient from an area of high concentration to an area of low concentration. This proton flow causes the rotor of the Fo motor to rotate, which in turn drives the rotation of the F1 motor. The rotation of the F1 motor results in synthesises of ATP from ADP (adenosine diphosphate) and inorganic phosphate (Pi), by using the energy derived from the proton gradient.

68
Q

what is ATP hydrolysis-driven proton pumping and why is it essential

A

In some cases, ATPases can also work in reverse, Thus it can hydrolyze ATP to ADP and Pi in order to pump protons across the membrane against their concentration gradient. This process is called ATP hydrolysis-driven proton pumping and is essential for maintaining cellular ion homeostasis and other physiological processes.

69
Q

what are the 2 components that are the main components of ATP synthase

A

The ATP synthase enzyme is a complex molecular machine that is responsible for synthesizing ATP (adenosine triphosphate).
ATP synthase consists of two main components: a membrane-embedded Fo region and a catalytic F1 region. The F1 region contains three catalytic β-subunits that undergo conformational changes during ATP hydrolysis or synthesis.

70
Q

what happens during ATP hydrolysis

A

During ATP hydrolysis, ATP molecules are broken down into ADP (adenosine diphosphate) and inorganic phosphate (Pi), releasing energy that is used to drive other cellular processes.

71
Q

what happens during ATP synthesis

A

During ATP synthesis, ADP and Pi are combined to form ATP using energy obtained from a proton gradient across the mitochondrial membrane generated by the electron transport chain.

72
Q

what are the 3 conformations that ATP synthase beta-subunits have and at any given times what beta-subunit conformations does 1 R1 molecule have

A

The β-subunits of ATP synthase have three distinct conformations: open, loose, and tight. These conformations play a crucial role in the catalytic cycle of ATP synthesis or hydrolysis. At any given time, an R1 (rotor) molecule of ATP synthase can have one β-subunit in each of these three conformations.

73
Q

how is the rotation of the central shaft of ATP synthase allow ATP synthesis or hydrolysis to occurs

A

The rotation of the central shaft of ATP synthase is coupled to these conformational changes in the β-subunits, which allows ATP synthesis or hydrolysis to occur. The cooperative participation of the β-subunits in a sequence of steps ensures efficient ATP synthesis or hydrolysis in the ATP synthase enzyme.

74
Q

how does the Beta-subunit of ATP synthase change from open state to loose state and then to tight state and how does tight state go back to the loose state so that ATP synthase is ready for another round of ATP synthesis and what happens at these stages

A

During ATP synthesis in the F1 region of ATP synthase, the β-subunit undergoes a conformational change from the open state to the loose state, which allows ADP and inorganic phosphate (Pi) to bind. Then, upon a 120-degree rotation of the γ-subunit, the β-subunit undergoes another conformational change to the tight state. In the tight conformation, the active site of the β-subunit creates an environment that promotes the spontaneous formation of ATP from ADP and Pi. And after ATP synthesis, another 120-degree rotation of the shaft drives the tight state of the β-subunit back to the open state. In the open state, ATP can dissociate from the active site of the β-subunit, and the ATP synthase enzyme is ready for another round of ATP synthesis.

75
Q

what drives the conformational change of the beta-subunit in ATP synthase

A

The conformational change is driven by the energy obtained from the rotation of the γ-subunit, which is part of the central shaft of ATP synthase.

76
Q

what allows ATP synthesis to occur in a stepwise manner

A

The coordinated conformational changes of the β-subunit, coupled with the rotation of the γ-subunit, allows ATP synthesis to occur in a stepwise manner as the central shaft of ATP synthase rotates, converting the energy from the proton gradient into mechanical work to synthesize ATP efficiently.

77
Q

what are carrier proteins and what is there function

A

Carrier proteins are integral membrane proteins, which play a critical role in transporting select chemical substrates across cellular membranes. They undergo a step-by-step process similar to enzymes, involving substrate binding, conformational changes, and substrate release.

78
Q

what is the transport process carried out by carriers

A

The transport process mediated by carriers typically involves the following steps:

  1. Substrate binding: The carrier protein binds to the substrate molecule on one side of the membrane. This binding is highly specific and selective, allowing only certain substrates to be transported.
  2. Conformational change: Upon substrate binding, the carrier protein undergoes a conformational change that reorients the substrate-binding site across the membrane. This conformational change is usually driven by the energy obtained from the gradients of solutes across the membrane, such as ion gradients or concentration gradients of other substrates.
  3. Substrate translocation: The carrier protein transports the substrate across the membrane by undergoing a change in shape, allowing the substrate to be released on the opposite side of the membrane.
  4. Release of substrate: Once the carrier protein has transported the substrate to the other side of the membrane, it undergoes another conformational change to reset the substrate-binding site and releases the substrate molecule into the intracellular or extracellular environment.
79
Q

which direction is the substrate transported across the membrane by carrier proteins

A

The direction of substrate transport across the membrane depends on the relative concentrations of the substrate on the two sides of the membrane.

80
Q

Are carrier-mediated reactions reversible or irreversible

A

Carrier-mediated reactions are reversible

81
Q

how is the net transfer of substrates across the membrane determined by and what does that allow

A

The net transfer of substrates across the membrane is determined by the rates of second-order binding reactions, which are influenced by substrate concentrations. This allows for dynamic regulation of substrate transport based on cellular needs and environmental conditions.

82
Q

what can carrier proteins be classified into

A

Carrier proteins can be classified into different types based on their mode of transport and the direction of substrate movement across the membrane.

83
Q

what type of substrates does carrier proteins that are uniporters transport and how do they transport the substrates and an example of uniporter

A

Uniporters transport a single substrate across the membrane, typically down its electrochemical gradient. They facilitate the movement of a specific substrate from one side of the membrane to the other, without coupling it to the transport of any other molecule.
For example, glucose transporters (GLUT) are uniporters that transport glucose across cellular membranes, allowing it to move down its concentration gradient.

84
Q

what type of substrates does carrier proteins that antiporters transport and how do they transport the substrates and an example of antiporter

A

Antiporters exchange two substrates in opposite directions across the membrane. They facilitate the movement of substrates in opposite directions, typically exchanging like-for-like substrates.
For example, the adenine nucleotide carrier (ANC) antiporter exchanges ADP for ATP across the mitochondrial inner membrane, helping to maintain the balance of adenine nucleotides in the mitochondria.

85
Q

what type of substrates does carrier proteins that are symporters transport and how do they transport the substrates and why are sympoters important

A

Symporters, also known as cotransporters, allow two or more substrates to move together in the same direction across the membrane. They facilitate the movement of substrates in the same direction, often using the energy stored in the electrochemical gradient of one substrate to drive the transport of another substrate against its concentration gradient. Symporters are important for the uptake of essential nutrients, such as ions or sugars, into cells.

86
Q

why does channels, pumps and carriers work together and what do they regulate

A

Channels, pumps, and carriers work together to facilitate the transport of water and ions across cell membranes, which is crucial for regulating cellular volume and for various physiological processes, such as secretion and absorption of fluids in different tissues and organs, such as the salivary glands, kidneys, inner ear, and plant guard cells. Their cooperative actions ensure proper cellular function and enable cells to respond to changes in their environment effectively.

87
Q

Establishment and maintenance of the membrane potential depend on which factors

A

The establishment and maintenance of the membrane potential depend on several factors, including the concentration gradients of ions created by pumps and carriers, as well as the relative permeabilities of various ion channels.
Ion pumps, such as ATP-powered pumps, actively transport ions across the membrane, establishing concentration gradients of ions, with higher concentrations on one side of the membrane compared to the other. Similarly, carriers facilitate the transport of ions across the membrane, contributing to the establishment of ion gradients.

88
Q

what does ion channels regulate and what is membrane potential

A

Ion channels play a critical role in regulating the electrical potential across cell membranes, which is known as the membrane potential.
The membrane potential is the difference in electrical charge across the cell membrane, with one side of the membrane being more positively charged and the other side being more negatively charged.

89
Q

how is Ca2+ signalling regulated and what is the function of Ca2+ (calcium ions)

A

Channels that allow the influx of Ca2+ from outside the cell or from intracellular compartments, such as the endoplasmic reticulum (ER), into the cytoplasm are important for regulating Ca2+ signaling.
Calcium ions (Ca2+) play a crucial role in various cellular processes, including secretion and muscle contraction.

90
Q

what are channels and how can they be classified based on the number of transmembrane segments they have

A

Channels are integral membrane proteins that are responsible for the selective movement of ions or molecules across cell membranes.
Channels can be classified based on the number of transmembrane segments they possess.
Some channels have only one transmembrane segment, which typically consists of an α-helix that crosses the lipid bilayer once.
Channels can also have two or more transmembrane segments. These channels often form complex structures with multiple α-helices that span the lipid bilayer.

91
Q

what is the S5-S6 channel family and what do they regulate

A

The S5-S6 channel family is a group of ion channels that are characterized by their specific sequence motifs in the S5 and S6 transmembrane segments. These channels play a crucial role in regulating the flow of ions across cell membranes and are involved in various physiological processes, including electrical signaling, muscle contraction, and nutrient transport.

92
Q

how many genes in humans encode for channels and what does this mean

A

The diverse array of channels are encoded by approximately 400 genes in humans meaning that channels play a critical role in regulating cellular function and maintaining physiological homeostasis.

93
Q

what are pumps and where do they get energy from and what process is carried out and what does it result in

A

Pumps are integral membrane proteins that utilize energy from ATP hydrolysis, light absorption, or other chemical reactions to actively transport ions or molecules across cell membranes against their concentration gradients. This process requires energy input and results in the accumulation of ions on one side of the membrane while depleting them on the other side, creating an electrochemical potential or ion-motive force across the membrane.

94
Q

what does the ion-motive force across the membrane represent and how is it utilize

A

The ion-motive force across a membrane represents a reservoir of energy that can be used to do work in various cellular processes. Just like using a pump to fill an elevated reservoir with fluid, pumps in cells create a similar effect by building up a concentration gradient of ions across a membrane, which can then be utilized to drive other cellular processes such as nutrient uptake, secretion, and generation of electrical potentials for nerve conduction and muscle contraction.

95
Q

how is cystic fibrosis occurred, what is cystic fibrosis and what does the treatment focus on

A

The CFTR channel is a chloride (Cl-) channel that regulates the movement of chloride ions and water across cell membranes. When the CFTR channel is not working properly due to genetic mutations, it can lead to cystic fibrosis (CF), a condition characterized by thickened mucus in the lungs, difficulty in breathing, and increased susceptibility to respiratory infections.

Treatment for cystic fibrosis focuses on improving airway clearance and managing infections, and novel therapies targeting the underlying genetic mutations are also being used.