MCAT Organic Chemistry Flashcards
Why is the alpha-anomer of d-glucose less likely to form than the beta-anomer?
A) The beta-anomer is preferred for metabolism
B) The beta-anomer undergoes less electron repulsion.
C) The alpha-anomer is the more stable anomer.
D) The alpha-anomer forms more in L-glucose.
B
The hydroxyl group on the anomeric carbon of the beta-anomer is equatorial, thereby creating less steric hinderance than the alpha-anomer, which has the hydroxyl group of anomeric carbon in the axial position.
Ethanol has been popular with humans for more than 10,000 years. Moreover, many animals are known to seek out rotten fruits that have fermented even moderate levels of alcohol. Which of the following agents would oxidize a primary alcohol to an aldehyde?
A) Pyridinium chlorochromate B) Na2Cr2O7 C) K2CrO7 D) CrO3, H2SO4 E) None of the above
A)
Pyridinium Chlorochromate (PCC) converts a primary alcohol to an aldehyde because it lacks the water necessary to hydrate the otherwise easily hydrated aldehyde. Both Na2Cr2O7 and K2Cr2O7 will produce a carboxylic acid. CrO3, H2SO4 will also produce a carboxylic acid.
The benzene ring typically undergoes:
A) Nucleophilic addition
B) Nucleophilic substitution
C) Electrophilic addition
D) Electrophilic substitution
D
Substitution reactions are preferred because they preserve the very stable aromatic structure. Electrophiles can join the ring because of the resonance stabilization of the intermediate ion.
Reaction of alcohols with nucleophiles often requires the presence of acid because:
A) Alcohols only react with hydrogen halides
B) -OH is a poor leaving group and therefore must be pronated to form a better leaving group, -OH2+
C) Acids prevent rearrangement of the carbocation
D) Acids prevent bond cleavage
B
The hydroxide group is a strong base and therefore a poor leaving group. It must be pronated to form a weak base, H2O, so that it can leave the molecule.
What term accurately describes the structural relationship between (1R,2S)-1,2-dibromocyclopentane and (1R,2R)-1,2-dibromocyclopentane?
A) Conformers
B) Enantiomers
C) Diastereomers
D) Constitutional isomers
C
When drawing out the structures, one can see that the basic skeletal arrangements are identical, i.e. stereoisomers (not constitutional isomers). We can dismiss conformers, since the structures cannot be interconverted exclusively by rotations about formally single bonds. The compounds are diastereomers, a class of stereoisomers that are non-superimposable, nonmirror images of one another. More specifically, the compounds are epimers: in chemistry, epimers are diastereomers that differ in configuration of only one stereogenic center.
(Difference between molecules: both have pentane ring, one has Br towards and away, the other has both Br atoms toward).
What is the major product of the reaction below, and what is the mechanism by which it is produced?
(CH3CH2)3CBr + F– –> ; temperature: 500C; solvent: water
A) (CH3CH2)3CF; SN1
B) (CH3CH2)3CF SN2
C) CH3CH=C(CH2CH3)2; E2
D) CH3CH=C(CH2CH3)2; E1
A
This is an example of a SN1 reaction where first step is Br (good leaving group) dissociates to produce a carbocation (stabilized by the polar protic solvent, water). The tertiary carbocation intermediate is very stable, especially in the highly polar protic solvent water. The carbocation then combines with the strong nucleophile, the F- ion. The original substituent (Br) must be a better leaving group than the nucleophile (F-) in order for the reaction to occur). C and D are wrong because this is not an elimination reaction. B is wrong because this is not an SN2 reaction, due to the highly hindered substrate, and the type of solvent used in the reaction (SN2 reactions favor polar aprotic solvents, not polar protic solvents).
Heterocyclic amines are found in the base of DNA. Their most important property includes their basicity due to the presence of nitrogen. Which of the following statements is true about the extra pair of electrons in pyrrole and pyridine? (Google search these amines to see structures.)
A) In pyrrole, an sp2 orbital contains the pair of electrons, while in pyridine, they are involved in the pi cloud
B) In both pyrrole and pyridine, an sp2 orbital contains the pair of electrons
C) In both pyrrole and pyridine, they are invovled in the pi cloud
D) In pyrrole, they are invovled in the pi cloud, while in pyridine, an sp2 orbital contains the pair of electrons
D
In pyrrole, the sigma bonds around nitrogen are formed by sp2 hybrid orbitals, not sp3. A nitrogen electron participates in each of the sigma bonds. The remaining nitrogen electrons are in a nitrogen 2p orbital which overlaps with the carbon 2p orbitals in the ring to form pi bonds and the cyclic compound, delocalizing the lone pair. In pyridine, the nitrogen atom donates one electron to each of the two sigma bonds by use of sp2 orbitals. The third sp2 orbital contains two electrons, which are for acids. One electron of nitrogen is present in a p orbital, which interacts with the carbon p orbitals to form the pi bond.
Heterocyclic amines are a very important type of amino group. One use of them includes being the base of DNA. The most important property however is their basicity due to nitrogen.
Pyrrole undergoes electrophilic substitution at position 2 because:
(Google search these amines to see structures.)
A) The carbocation intermediate has more resonance structures than the intermediate formed when the electrophile attacks position 3
B) The inductive effect of nitrogen is greater
C) The aromatic ring is maintained in the carbocation
D) Resonance structures cannot be drawn for the carbocation intermediate formed by the attack at position 3
A
Attack at position 2 gives three resonance structures greatly adding to stability of the molecule (positive charge on nitrogen, then position 3, and then position 5). Position 3 only has two resonance structures.
Which of the following statements about 3-bromo-1,1-dimethylcyclobutane are true?
I. It is saturated
II. It is a planar molecule.
III. It has no ring strain
A) I only
B) II only
C) III only
D) I and III
A
A saturated molecule is one where all the valences of the atoms are satisfied by single covalent bonds. In other words, there are no double bonds. Statement I is true.
A planar molecule is a flat one. In this case, we have two opposite corners in a tetrahedral shape. II is not true.
Ring strain is minimized in a cyclohexane and maximized in a cyclopropane, but it is always present in a cyclic molecule. III is not true. Thus the answer is A.
What is the major product of the reaction below, and what is the mechanism by which it is produced?
(CH3CH2)3CBr + F– –> ; temperature: 500C; solvent: water
A) (CH3CH2)3CF; SN1
B) (CH3CH2)3CF SN2
C) CH3CH=C(CH2CH3)2; E2
D) CH3CH=C(CH2CH3)2; E1
A
This is an example of a SN1 reaction where first step is Br (good leaving group) dissociates to produces a carbocation (stabilized by the polar protic solvent, water). The tertiary carbocation intermediate is very stable, especially in the highly polar protic solvent water. The carbocation then combines with the strong nucleophile, the F- ion. (the original substituent (Br) must be a better leaving group than the nucleophile (F-) in order for the reaction to occur). C and D are wrong because this is not an elimination reaction. B is wrong because this is not an SN2 reaction, due to the highly hindered substrate, and the type of solvent used in the reaction (SN2 reactions favor polar aprotic solvents, not polar protic solvents).
The hybridization state and shape of a carbocation is:
A) sp and linear
B) sp2 and trigonal planar
C) sp3 and tetrahedral
D) sp3 and trigonal planar
B
On the surface: A carbocation is bonded to 3 substituents and so it is in the middle of a flat triangle: trigonal planar.
When carbon has:
4 subtituents: sp3 and tetrahedral (109.5º)
3 subtituents: sp2 and trigonal planar (120º)
2 subtituents: sp and linear (180º)
Going Deeper: There are three bonding electron pairs around the carbon atom, and these can be placed as far apart as possible in an sp2 trigonal planar framework. The empty orbital, which results in the charge, is the 2pz atomic (unhybridized) orbital.
(Fill in the blanks) Benzoic acid can be extracted into water from an organic solvent using _________ and then removed from the water into an organic solvent by the addition of _________.
A) Sodium bicarbonate / sodium hydroxide
B) Hydrochloric acid / sodium hydroxide
C) Hydrochloric acid / sulfuric acid
D) Sodium hydroxide / hydrochloric acid
D
Benzoic acid, an organic compound, is insoluble in water. Extraction into water can be achieved with aqueous sodium hydroxide (deprotonation -> polar sodium benzoate, now soluble in water). Transfer of the benzoate back into organic solution is accomplished by treatment with hydrochloric acid (protonation -> less polar benzoic acid).
A high intensity peak in the mass spectrum of 2,2-dimethylpentane is observed at m/z 57. What chemical species does this peak represent?
A) Methyl cation
B) tert-butyl carbocation
C) n-propyl carbocation
D) Ethyl carbocation
B
The most stable fragment likely formed from 2,2-dimethylpentane fragmentation is t-butyl species.
T-butyl species = 57 m/z on mass spectrum
The addition of an acid and heat to 2-oxocyclopentanecarboxylic acid yields a:
A) cyclopentene
B) cyclopentanol
C) cyclopentanone
D) cyclopentanecarboxylic acid
C
Beta-keto carboxylic acids undergo decarboxylation through ring formations. The carbonyl bond of the ketone will react with the alcohol group of the carboxylic acid to form a ring and release the carboxylic acid as CO2. The remaining enol will tautomerize into a carbonyl group again, leaving cyclopentanone.
The data in Table 1 were collected for Reaction I:
2X + Y –> Z
Reaction I
Exp [X] in M [Y] in M Initial Rate of Rxt
1 0.050 0.100 8.5 x 10^-6
2 0.050 0.200 3.4 x 10^-5
3 0.200 0.100 3.4 x 10^-5
What is the rate law for the reaction?
A) Rate = k[X]^2[Y]
B) Rate = k[X]^2[Y]^2
C) Rate = k[X][Y]^2
D) Rate = k[X][Y]
C
This is a common MCAT-type question. By looking at Table 1, we can see that when the concentration of X is quadrupled (factor of 41) while [Y] is unchanged (Exp. 1 and 3), the rate is increased by a factor of 4 = 41. Thus the order of the reaction with respect to X is 1 (= “first order with respect to X”).
When the concentration of Y is doubled (factor of 21) while [X] remains the same (Exp. 1 and 2), the rate of reaction is quadrupled (factor of 4 = 22). Thus, the order of reaction with respect to Y is 2 (= “second order with respect to Y”).
The rate equation is Rate = [X][Y]2. Since the overall rate of reaction is the sum of exponents, we can say that the reaction is (1 + 2) a third order reaction overall.
{Notice that the stoichiometric coefficients are not relevant; the order of reaction being based on data.}
Additional learning point: In Organic Chemistry, an SN2 reaction is typical of a second order reaction where the rate must be equally proportional to the concentration of both reactants; for example, first order with respect to the alkyl halide and first order with respect to the nucleophile, so overall second order.
The anomers of D-(+)-glucose differ in their configuration around which of the following?
A) C-1
B) C-5
C) C-6
D) C-2
A
Glucose anomers have a different orientation of the hydroxyl group on the C-1 carbon.
A radioactive substance A was placed in a lead-lined container and the radiation it emitted was allowed to pass through a small aperture in the container and below a positively charged plate. The path of the particle changed such that it angled up toward the plate. Which of the following could it be?
A) Alpha particle
B) Beta particle
C) Proton
D) Gamma particle
B
Since the radioactive emission angled up toward the positive plate, it must be oppositely charged, that is, negatively charged. The only negatively charged species in the answer choices is the beta particle which is, by definition, an electron or a positron. Note that electromagnetic radiation like gamma rays (particles) and infrared radiation are not deflected in electromagnetic fields.
Heterocyclic amines are a very important type of amino group. One use of them includes being the base of DNA. The most important property however is their basicity due to nitrogen.
Pyridine is a much stronger base than pyrrole because:
A) Pyrrole will lose its aromatic character if nitrogen accepts an acid
B) Pyridine has a pair of electrons in an sp2 orbital that is available for sharing
C) The extra pair of electrons on nitrogen in pyrrole is involved in the pi cloud and therefore less available for sharing
D) All of the above
D
In pyrrole, the sigma bonds around nitrogen are formed by sp2 hybrid orbitals, not sp3. A nitrogen electron participates in each of the sigma bonds. The remaining nitrogen electrons are in a nitrogen 2p orbital which overlaps with the carbon 2p orbitals in the ring to form pi bonds and the cyclic compound, delocalizing the lone pair. In pyridine, the nitrogen atom donates one electron to each of the two sigma bonds by use of sp2 orbitals. The third sp2 orbital contains two electrons, which are for acids. One electron of nitrogen is present in a p orbital, which interacts with the carbon p orbitals to form the pi bond.
Which molecules contain an IR stretching frequency of 1680-1740 cm-1?
I. Alcohols
II. Carboxylic acids
III. Nitriles
IV. Amides
A) I and II
B) II and III
C) II and IV
D) III and IV
C
All carbonyl compounds absorb in the region 1760-1665 cm-1 due to the stretching vibration of the C=O bond. Different carbonyl compounds absorb in narrow ranges within this general region. Carboxylic acids and amides contain carbonyl functionality. Alcohols have broad absorption at approx. 3200-3500 cm-1; nitriles show absorptions at approx. 2250 cm-1.
In the phrase “SN1 Reaction”, what does the “1” indicate?
A) The equilibrium constant
B) The number of reactants involved
C) The stereochemical outcome
D) The rate order
D
“SN” stands for nucleophilic substitution and the “1” represents the fact that the rate-determining step is unimolecular.
In proton NMR spectroscopy, which compounds or functional groups show a characteristic peak in the range 9-10 ppm?
A) Halogenated alkanes
B) Aldehydes
C) Alcohols
D) Aromatic compounds
B
Nuclear magnetic resonance (NMR) is concerned with the magnetic properties of certain nuclei. Anything that removes electron density from around a nucleus deshields it and shifts the absorption to higher frequency. The more electronegative the atoms that are attached to the nucleus, the higher the absorption frequency. Thus, NMR is able to provide information on the types of functional groups present as each has a characteristic chemical shift range. ALDEHYDES HAVE A VERY CHARACTERSTIC SHIFT OF 9-10 PPM.
Choose the molecules containing an IR stretching frequency of 3500-3000 cm-1.
I. Amines
II. Carboxylic Acids
III. Phenols
IV. Alcohols
A) (I) and (II)
B) (II) and (III)
C) (III) and (IV)
D) All of them
D
The range 3500-3000 cm-1 is typically associated with stretches between heteroatoms and a hydrogen atom, for example NH and OH bonds. They may appear broad, intense and jagged (COOH), broad and smooth (OH) or less intense and sharper (NH). The preceding sentence is likely more than you would need to know for the MCAT. In general, for MCAT purposes, it is useful to remember APPROX. 3300 FOR HYDROXYL AND APPROX. 1700 FOR CARBONYL (C=O).
Infrared spectroscopy is often used to determine the presence of a carbonyl group in a compound. It is a strong band appearing at about 1700 cm^-1 in aldehydes, ketones, and carboxylic acids and their derivatives. A carboxylic acid will show another carbon oxygen stretching band at:
A) A higher frequency
B) A lower frequency
C) The same frequency
D) A frequency in the ultraviolet region of the electromagnetic spectrum
B
A C-O single bond is weaker than a double bond. Therefore, less energy is needed to induce the stretching vibration. Remember reciprocal centimeters is a measure of frequency and energy is directly proportional to the frequency.
Which reagent would you choose to convert hexan-1-ol to hexanal?
A) PCC/CH2Cl2
B) DIBAL/diethyl ether
C) KMnO4/aqueous H2SO4/acetone
D) K2Cr2O7/aqueous H2SO4/acetone
A
Pyridinium chlorochromate (PCC) is a mild oxidant, which converts primary and secondary alcohols to aldehydes and ketones respectively. KMnO4 and K2Cr2O7 are harsher oxidants, and would further oxidize primary alcohols to the corresponding carboxylic acids. Di-isobutylaluminum hydride (DIBAL) is a reducing agents.