M and R Flashcards
What are the general functions of membranes?
Selective permeable barrier enclosed environment Communication recognition of signaling molecules signal generation
What are some of the specific functions a membrane can have ?
Interaction with adjacent cells absorption or secretion changing shape for transport synapses electrical signal conduction
Describe the composition of a plasma membrane
40% lipid
60% Protein
1-10% carbohydrates
How are plasma membranes stabilised?
H bonds with h2o
Give an example of a phospholipid
Phosphatidylcholine
Give an important property of phospholipid molecules
Amphipathic
How are phospholipid molecules named?
By their head
How can chain length of phospholipid molecules vary ? What are the most common lengths?
C14-C24
Most common C16 and C18
Describe the structure of a phospholipid
Glycerol backbone, 2 FAs with phosphate group and head
What is a plasmalogen? Give an example of one
Lipid not based on glycerol eg sphingomyelin
What is a glycolipid?
Lipid containing sugar
What are the two types of glycolipids?
Cerebroside - contain a sugar monomer
Ganglioside- contain a sugar oligosaccharide
What movements are lipid able to do in a bilayer?
Flip flop
Rotation
Lateral drift
Flexion
A double bond in a phospholipid has what effect?
Introduces a kink reducing packaging and therefore increasing fluidity
How can a protein move in a bilayer?
Rotation. lateral drift and conformational change
What type of movement can a lipid do but not a protein in a plasma membrane?
Flip flop - requires too much energy for the hydrophobic and hydrophilic moieties to swap.
Describe an integral protein
Hydrophobic interactions with membrane - has at least one transmembrane domain
Describe a peripheral protein
Held in place by electrostatic interactions or H bonds - no transmembrane domain
What evidence is there for proteins ?
Freeze fracture
Fractionalization and SDS page
Specificity of function
Why do proteins have reduced movement than lipids?
Tethering to cytoskeleton
Aggregates
Lipid mediated effects - areas of low cholesterol
Basolateral junctions
Where would you find the cytoskeleton?
Cytostolic face of membrane
Describe spherocytosis anemia
Spectrin depleted by 40-50% leading to spherical shaped RBCs
Describe eliptocytosis
Defect in spectrin meaning they are unable to form tetrameres leading to fragile ellipoid cells
What is topology?
Mechanisim of inserting proteins meaning proteins have very specific orientation in the membrane- membranes are therefore asymmterical.
What proportion of a membrane is cholesterol?
45%
How does cholesterol stabilise the membrane ?
Through H bonds
CHOLESTEROL ABOLISHES THE ENDOTHERMIC PHASE TRANSITION OF THE LIPID BILAYER
The sterol ring decreases packaging and increased fluidity
The long tail reduces chain motion decreasing fluidity
What types of molecules are able to easily pass through the bilayer?
Hydrophobic - oxygen, carbon dioxide, nitrogen and benzene
Small uncharged polar molecules - water, urea, and glycerol
What molecule cannot pass through the bilayer?
Ions
Large uncharged polar molecules
What are the uses of proteins in the bilayer?
Maintain ionic composition
Maintain cell volume
Maintain pH
Concentration of metabolites and anabolites
Remove waste products
Generation of ionic gradients for function
What does diffusion depend on?
Gradient and permeability
What three methods of transport are there when using a protein?
Uniport
Antiport
Symport
What is the problem with transport of molecules using proteins ?
They are saturatable
Give the extracellular concentration of Na ions
145mM
Give the extracellular concentration of Cl ions
123mM
Give the extracellular concentration of Ca ions
1.5mM
Give the extracellular concentration of K ions
4mM
Give the intracellular concentration of Na ions
12mM
Give the intracellular concentration of Cl ions
4.2mM
Give the intracellular concentration of Ca ions
10-7M
Give the intracellular concentration of K ions
155mM
Describe and give the properties of the Na+ pump
3 sodium out
2 K in
Uses one ATP
Provides the concentration gradient and therefore energy for lots of secondary active transports
Describe the NCX transporter
sodium calcium exchanger
1 calcium out for 3 sodium in
Low affinity high capacity
Electrogenic
Describe the PMCA
Plasma membrane Ca ATPase
One calcium out for one H in
Brings in H to increase electrochemical efficiency
High affinity low capacity
Describe the SERCA
Sarco(endo)plasmic reticulum Ca ATPase
One calcium out for one H in
located on ER - creates store of Ca
Describe the NHE
one H out for One sodium in
extrudes acid using NA gradient - role in pH conc
Describe the AE
Anion exchanger
Bicarbonate out and Cl in
Extrudes base and electrochemically neutral
How do proteins help control cell volume?
Movement of osmotically active ions or organic osmolytes - h20 follows
How do proteins help control cell pH?
Using Na gradient
Extrude / influx acid or base
What is the membrane potential ?
Electrical potential different across a membrane controlled by movement of ions
-20–90mV
What is the equilibrium potential ?
The potential difference across a membrane that is selectively permeable to only that ion- electrical chemical gradient equals concentration gradient leading to no net movement
How do you calculate the equilibrium potential for an ion?
Use of the Nernst Equation
E= 61/Z log 10 (conc out/ conc in)
How is the resting membrane potential brought about?
Membrane selectively permeable to K+
K+ down concentration gradient and in down chemical gradient but anions cannot follow making cell negative compared to outside.
Na pump has minor role but is mainly used to created gradients
What types of gating are there?
Ligand - Fast ( intrinsic ion channel) slow ( GPCR)
Mechanical
Voltage
Give four properties of an AP
All or nothing
Only occur if reach threshold
Distinct signals
Propagated without loss of amplitude
Define depolarisation
Cell interior less negative
Define hyperpolarisation
Cell interior more negative
During the AP which ions conductance changes rapidly and which one slowly
Na - quickly
K- Slowly
What type of feedback is involved in an AP?
Postive
Describe the channel and ion channels leading to depolarization and then repolarisation?
Na channels open leading to Na entering the cell which increases the number of Na channels open and therefore the influx of Na into the cell. This depolarises the cell.
Depolarisation opens K channels leading to influx of K into the cell and causes inactivation of Na channels stopping the Na influx resulting in repolarisation.
What happens during the absolute refractory period ?
All Na channels are inactivated- excitatory of cell is at 0
What happens during the relative refractory period?
Na channels are recovering- excitability returns to normal as number inactivated decreases
Describe accommodation
Constant sub threshold stimulus leads to more and more Na channels in the inactivated state meaning a larger stimulus for AP to be generated.
Eventually AP cannot be generated
Describe the structure of a Na channel ?
1 subunit = 4 domains = 1 functional protein
6 transmembrane domains - S4 channel voltage sensor- stimulated by change in transmembrane voltage
Describe the structure of a K channel?
1 subunit = 1 domain = 1/4 functional protein
Need 4 subunits
What is the length constant?
Distance it takes for initial signal to fall by 37% of original amplitude
What affects the length constant?
Diameter - larger = faster
Resistance - higher = faster
Capacitance - lower = faster
What is the effect on transmission of myelination? Why?
Quicker at larger axon diameter due to saltatory conductance
What effect does myelination have on resistance and capacitance ?
Increased resistance
Decreased capacitance
Where is high density of ion channels found in a myelinated neurone?
At nodes of ranvier
Describe the consequences of MS
Demyelination of neurones leads to a decreased length constant
Initially - total blockage of signal
Later - slower conductance as channels spread along the axon
How do you calculate unmyelinated neurone speed?
Proportional to square root of diameter
What is the maximal speed of an unmyelinated neurone?
20ms-1
How do you calculate the speed of a myelinated neurone?
Proportional to diameter
What is the maximal speed of an myelinated neurone?
120ms-1
At what point does speed in myelinated neurone equal that of unmyelinated?
1mm
Describe neurotransmitter release?
Ca entry though Ca channels bind to synaptotagmin
Vesicles brought close to membrane
Snare complex make a fusion pore
Transmitter released through this pore
What heads can you find on a phospholipid? What property do they all have ?
Choline, amine, amino acid, sugar
All polar
Describe the formation of the bilayer?
Amphipathic molecules form bilayer spontaneously in h20 driven by VdWs between hydrophobic tails
Structure is then stabilised by non covalent forces ; electrostatic and H bonds between hydrophilic moeites and interactions between hydrophillic moeites and h20
How are peripheral protiens removed?
pH or ionic strength
How are integral proteins removed?
Agents that compete for non polar interactions with bilayer
How is the orientation of proteins in the membrane determined?
Protein synthesis determines this with addition of highly hydrophobic stop transfer sequence. When protein is being translated and fed into ER lumen. The stop signal will remain in the ER once it has been translated - rest of the protein is translated in cytoplasm and protein will then span the membrane.
Give the properties of the stop transfer sequence
18-20 AA
Hydrophobic smaller uncharged AAs
What is a hydropathy plot? What are the axis?
y= hydropathy index
x= aa number
Shows how hydrophobic/ hydrophilic an AA sequence is
Can work out the number of TMDs a protein has
Define facilitated diffusion
Permeability of membrane to a substance is determined by specific proteins in the bilayer - modes include carrier molecules and channel proteins
What substance inhibits the Na pump?
Oubain
What happens to the NCX in ischaemia?
Decreased ATP so no Na pump leading to an increase in Na conc in the cell so the NCX reverses drawing Ca into cell.
What control is there on the NHE?
Activated by growth factors and inhibited by amiloride
Describe bicarbonate reabsorption in the proximal tube?
Na pump removes Na- NHE can therefore pump Na from the lumen into cells along gradient in exchange for H ions - H into lumen and picks up HCO3- bringing into cell.
Used to retain base for buffers
What are aquaporins?
Allow h2o to move increased easily through membrane - inclusion in membrane in kidney epithelial cells stimulated by ADH increasing water reabsorption
Describe loop diuretics ?
Block Na uptake in thick ascending limb of loop of henle
Describe amiloride
Potassium sparing diuretic acts on both ENAC and proximal NHE tubules to prevent Na reuptake
Describe the effects of excess aldosterone
Up regulate ENAC and NHE to increase Na uptake - contribute to hypertension
Treated by spironolactone
Describe glucose uptake
SGLUT1 - Na and glucose mover through faciliated diffusion- using conc gradient from Na pump
GLUT transport moves glucose from cell to blood stream
GLUT 1&3 found throughout the body - maintains basal level
GLUT 2 found in hepatocytes and pancreatic b cells
GLUT 4 found in striated muscle and adipose cells - insulin stimulates up regulation
How is it maintained that glucose never moves back into the lumen of the vessels from cells ?
Glucose is quickly converted into glucose-6-phosphate
What type of molecules move via passive transport?
Non polar molecules
How does rate change with changing the concentration gradient in passive transport?
Rate increases linearly with increase conc gradient
Describe the difference between active transport and other types of transport
Requires energy from ATP hydrolysis/ electron transport/ light
Against unfavorable conc and or electrical gradient
Describe the mitachondrial uniporter
High conc to buffer when potientally harmful- one ca in for breakdown of one ATP
Explain the issue with transporters in cystic fibrosis
Transport of Na of cell by Na pump allows NKCC2 channel but faulty CFTR protein leads to accumulation of Cl- in cell meaning water moves into cell via osmosis and viscous mucus in lumen
Explain the issue with transporters in diarrhoea
CFTR over activated by phosphorylation PKA- Cl- excessively transported into lumen water then follows.
In a 70kg male how much water is there? What is the breakdown of this ?
42L
Intracellular 28L
Extracellular 14L - interstitial 9.4L, plasma 4.6L
What would happen if there was a sudden change in Na levels ?
increase would lead to peripheral oedema or decrease would lead to shrinkage of interstitial space and blood volume –> organ misfunction
How is resting membrane potiental expressed?
Potiental inside the cell relative to outside
How can you measure a membrane potential ?
Using a very fine micropipette that can penetrate the cell and is filled with conducting solution KCl
What is the resting membrane potential of nerve cells?
-50–75mV
What is the resting membrane potential of smooth muscle cells?
-50mV
What is the resting membrane potential of skeletal / cardiac muscle ?
-80–90mV
Why is the resting membrane potential not equal to Ek of potassium?
Other ion channels are open
What does changing the permeability of K have on the membrane?
Changes Ek therefore changes resting potential.
What ions cause depolarisation of a membrane ?
Na and Ca
What ions cause hyperpolarisation of a membrane?
Cl and K
Describe fast synaptic transmission
Receptor is also an ion channel
Depolarising transmitter open channels with a positive reversal potential leading to excitation in cells causing excitatory post synaptic potential
Hyperpolarising transmitter open channels with -ve reversal potentials leading to an inhibitory post synaptic potential.
Describe slow synaptic transmission
Signal leads to channel being opened via a GTP binding protein.
Define an action potential
Change in voltage across a membrane. they are dependent on ionic gradient and relative permeability of the membrane. Generated by an increased permeability to Na in the membrane leading to movement towards Ena
What happens to other channels during an action potential?
open or close brought on by a conformational change
Why does the cell go into a state of hyperpolarisation after depolarisation in an AP?
Voltage gated k channels open therefore increased conductance of K
Describe the actions of procaine and its usage
Topical anaesthetic for medicine and dental surgery- vasoconstrictor and increases quality of anaesthetic.
Binds and blocks Na channels meaning AP cannot rise
Blocks conduction small myelinated axon, non myelinated axon and large myelinated axon so SENSORY BEFORE MOTOR
2 pathways
hydrophobic - pass through membrane becoming charged
hydrophilic- use dependent
Describe propagation of an action potential
Change in membrane potential at one part of the membrane affects adjacent sections of axon
local current causes spread of current
conduction velocity determined by how far axon current can spread
AP initiated at site of depolarisation
How does high membrane resistance lead to high conduction velocity?
Number of channels open - lower resistance increased channels open and more loss of local current across membrane limiting spread of current
How does low membrane capacitance lead to high conduction velocity?
Capacitance is the ability to store charge - high capacitance more current to charge and cause a decrease in spread of local current
Why does large axon diameter lead to high conduction velocity?
Decreased cytoplasmic resistance
Describe the composition of myelin
40% h2o
Dry mass
70-85% lipid and 15-30% protein
Which neurones is it easier to stimulate using electrodes and why?
Myelinated neurones as decreased capacitance
When does myelination start during development and when does it finish?
4th month of development and continues into 1st year of life
How long does regeneration in PNS take ?
1-3mm
Where are L type calcuim channels found?
Lungs, muscle and neurones
What chemical blocks L type calcuim channels?
Dihydropyridines
What types of calcuim channels are found in the heart?
R and T