Light Independent Reactions Flashcards
3 major steps of Calvin cycle
Carboxylation => PGA
Reduction => GAP
Regeneration => RubBp
Output of calvin cycle
Triose phosphate
PGA
3-Phosphoglycerate
GAP
Glayceraldehyde phosphate = triose phosphate
RubBp
Ribulose-1,5-bisphosphat
RubisCo
Carboxylase and oxygenase activity
carboxylation step
RubBp => PGA (phosphoglycerate)
Mediated by carboxylase activity of RubBp
Calvin Cycle
Reduction phase
GAP production in 2 steps
1) PGA kinase phosphorylates PGA using 2ATP
2) GADPH reduces 1,3 bis PGA using 2 NADPH
=> 6 GPA created from 3 CO2
=> one used for sugar biosynthesis, other 4 used for regeneration of RubBp
What derives from Calvin Benson cycle?
Sugars => Sucrose
Isoprenoids
Starch
Shikimate
Thiamine (immune, vitamins)
Nucleotides
Fructose-1,6-bisphosphate
derives from GAP
=> goes to hexose monophosphate pool (glucose and fructose precursors for energy storage)
=> activation with UTP/ATP
Biosynthesis of sucrose
Fructose-6-phosphate + UDP-glucose
=> sucrose-6-phosphat (dimer) + UDP
Starch Biosynthesis
ADP glucose assembles to chain of glucose polymer
= amylose
Amylose
Crystalline structure that forms starch granules
=> layers
How are enzymes of the calvin cycle activated?
Ferredoxin transfers electron => reduces enzyme
In reduced state, no disulfide bond = active
Inactive complex/supercomplex of proteins in low light condition (oxidized) => due to disulfide bonds
Oxygenase activity of RubisCo leads to
1 Phosphoglycerate (PGA) and one 1 2-phosphoglycolate (2 carbon compound)
How can RubisCo activity be increased?
Increase conc. (50% of proteins in a leaf are RubisCo)
Concentrate CO2 around RubisCo
Structure of RubisCo
L8S8
(Large => catalytic/small => regulatorysubunits)
Large encoded by plastid genome
RubisCo activation
Requires:
binding of Substrate (CO2)
= Carbamylation at Lys (E)
Mg2+
Inhibition of RubisCo
RubBp
Xylose phosphate
Photorespiration
Phosphoglycolate conversion into phosphoglycerate
Involves chloroplast, peroxysome and mitochondria => very energy consuming process
Why did RubisCo evolve oxygenase activity?
Evolved in low oxygen atmosphere => but similar molecules (CO2 & O2) => by chance?