Lectures M1-M2 Flashcards
Hamilton relatedness
rB > C
relatedness, benefit, cost
Naked mole rats relatedness and eusociality
- Queen female gives birth to all
- Only mammal that shows eusociality
- Communal care of young
- Reproductive division of labour
- Overlapping generations
Why?
High genetic relatedness
0.81 relatedness
More than any other non-inbred species
Should one kill its sibling - sibling-offspring conflict
Look at rb>c
r=1 for itself, r=0.5 for its sibling (if same father)
- So yes they should fight to survive and kill if need be
- Might also kill them bc it would allow them a better chance of making it to a high weight
How much should a parent invest in their offspring = parent-offspring conflict
- depends on life time cost and benefit
- Consider effect on future offspring and future ability to reproduce
- Offspring may seek more than parents should provide (need to save energy for next offspring) → conflict
Phylogeny
- All living species are a product of descent with modifications from common ancestors
- More related if branch at the same place (same common ancestor)
- More recently related if branched later (closer to the branch tips)
Primates groups (phylogeny)
Primates
- Tarsii
Strepsirrhini
- Platyrrhini
- Catarrhini
Catarrhini
- Cercopithecidae
- Hylobatidae
- Hominidae
Hominidae
- Pongo
- Gorilla
- Pan
- Ardipithecus
- Australopithecus
- Homo
Origins of agriculture - humans
+ definition
Agriculture = planting of certain cultivars in particular substrates
- 10 000 ya in humans
- Cultivation aimed at improving crop growth for food
Insect agriculture
- 50/66 million + years ago in ants and beetles
- involves growing fungi on gardening substrate (e.g. plant material) and protecting their crop from undesired species (weeds and pests)
- use pesticides
- Nine independent origins of insect agriculture, all involving fungal crop
- No reversal to non-agriculture life
1 origin in ants, 2 in termites
Giant asteroid 66 mya
- Caused global mass extinctions and shut down photosynthesis for several months
- Fungi proliferated as they feed on decaying organic matter
- Underground species survived better
- Opportunity for mammals to evolve
Microns and more (measurements)
+ what can we see
1 mm = 10^-3 m
1 micron = 10^-6 m
1 nm = 10^-9 m
- with the naked eye can see down to 0.1 mm
- bacteria and cells 1-30 microns
- viruses 20-100 nm
Learning
- Learning is the ability to acquire a neuronal representation of new information
- An individual may use that information to determine subsequent behaviour
Chemotaxis
- The ability of organisms and cells to move up or down chemical gradients
- Bacteria flows from high to low concentration areas
Chemotaxis in bacteria
- Even organisms with no nervous system modify their behaviour based on experience
- Successive comparison, (better or the same) which requires a minimum of one-step ‘memory’
- Bacteria can only keep the same direction or tumble to randomly change direction
- Simultaneous comparison is impossible because the chemical gradient across the body is too small
Humans chemotaxis gradient
- Do use simultaneous comparison for hearing and seeing, done by nervous system
Simultaneous comparison in humans
Do use simultaneous comparison for hearing and seeing, done by nervous system
Chemotaxis in E. coli
- Detection by receptors
- Conduction by messenger
- Processing based on messenger concentration (‘polling’)
- Transmission of decision
- Response
- flagella direct movement
NOT learning but similar
Sydney Brenner - C. elegans
- A small soil worm (1 mm) that feeds on bacteria, with ~959 cells and 302 neurons, with all synapses mapped & entirely sequenced genome
- Researchers can turn off individual neurons by laser ablation & record from individual neurons
Biomimicry
Copying successful mechanisms of animal behaviour into new gadgets
Innate behaviour
A behavioral pattern that appears in fully functional form from the first time it is performed
(the animal may have not had prior experience with the cues that elicit that behaviour)
- Similar terms: instinct, fixed action pattern, motor program
Example: fly courtship, nest building, blinking
Innate behaviour - advantages
- Saving time when responding to stimuli
- Proper response the first time = making less mistakes
Ex. Village weaverbird
Male chooses a forked branch and builds nest around itself in a specific shape
Goose video
Innate eggs
- All round shaped things=eggs
- Ensures no real eggs are left behind
- Roll any thing near nest and slightly egg like (don’t have to be the right size or shape though)
- Instinct to recover eggs rolled from nest
- Greater benefit to saving all potential eggs than cost of caring for one extra egg
Damselfly experiment
Question: Can damselfly larvae show anti-predatory behaviour to an unknown predator?
- Use damselflies never before exposed to pike (predatory fish), evolved in a habitat with no pike and are inexperienced with pike in the laboratory.
- Let 3 groups of pikes feed on minnows (small fish), damselflies (of the same species) or mealworms (beetle larvae)
Note: minnows co-occur in nature with the damselflies but beetles do not - Move the pikes to different tanks with fresh water and keep them there for 3 days
Damselfly experiment - results
- Damselflies more scared behaviour in tanks with potential predators (reduced activity)
- When they smelled pike + dead damselflies
- Or pike + dead minnows
- NOT pike + mealworms (not familiar with either)
Avoid smell of dead FAMILIAR animals
No innate fear response to unfamiliar ones
NO innate antipredatory response to pike
YES innate antipredatory response to unknown fish that has preyed on damselflies or minnows
NO innate response to unknown fish preying on unknown prey
Insects and blood preferences - background
how many ppl does it infect
- subspecies Ae aegypti that is brown and gets meals from humans = domestic species
- infects 400 million ppl / year
- spreads dengue fever, etc.
- accidentally introduced into Kenya in 1950s
- they would lay eggs in water containers
Insects and blood preferences - explanation
Due to odour preferences
- Subspecies don’t breed with one-another even though they live close and CAN produce viable offspring
- Genetic differences in odorant receptors (family of chemosensory receptors) in their response to sulcatone
- Sulcatone found in human odorants much more than in nonhumans
- Domestic subspecies much more sensitive to presence of sulcatone and OR genes for sulcatone overexpressed (= more functional products) in domestics
= odour preferences
Termite Eusociality
- When queen dies, some workers become aggressive until one of them become queen
- Due to lack of queen-worker chemical signalling
Specifically from gene Neofem2 - begin to do aggressive butting that would eventually lead to reproduction
Mendel’s Laws
First Law: Principle of segregation
- Individuals have two copies of each gene (aka “factors”) that remain separate and segregate/distribute during formation of eggs or sperm
- Can be dominant or recessive
Second Law: Independent assortment
- Whichever allele is passed down to the next generation at one locus is independent of the gene passed down at the other locus
- Only true for unlinked loci
Mating behaviour of male ruff birds - Philomachus pugnax
Satellite or independent type ruff males
- Independent → majority of males, guard small mating territories
- Satellite → minority of males, temporarily share territories with independents, form an alliance where they both court females, don’t defend their own territories, smaller and lighter plumage than independents
Mating types controlled by a single gene; S for satellite
- Independents = ss, satellites = Ss or SS
- Independent still more common due to historical distributions over time
Genes for polygenic traits
- Traits associated with variation at more than one locus = polygenic
- Set of genes, each contributes to a small amount to the expression of the trait of interest
- Search for the set = looking for QTLs (quantitative trait loci)
QTL mapping
- Find general region in a genome where quantitative loci reside
- Use a marker loci with an unrelated function
- If usually inherited together = genes near each other
QTL mapping and fear/fearlessness in mice → Jonathan Flint
- Studied fear and anxiety by measuring open-field behaviour in mice
- Fear/anxiety when high defecation and low activity
- Identified more fearful mice and determined QTLs for fear on six chromosomes; 1, 4, 12, 15, 17, 18
Genes, mRNA, and honeybee foraging
Per
- Period/per gene influences circadian rhythms and development time in fruit flies
- Per mRNA influences developmental changes associated with the transition to forager
Older + foragers = more per
Younger + nurses = less per
link between per mRNA and foraging rather than mRNA and development
Honeybee gene malvolio - implications for foraging
- Mvl determined to be useful as it affects the way fruit flies respond to sucrose, which is n honeybee food and drink
- Most to least responsiveness to sucrose: pollen foragers, nectar foragers, nurses
- Both the amount of manganese in the head of a honeybee and the amount of mvl mRNA in the honeybee brain were high in pollen foragers and nectar foragers, and low in nurses
Song acquisition in birds
F N Z
FOXP2 gene: associated with song perception in birds
Deactivation in young zebra finches = impaired ability to copy songs
Neostriatum section of the forebrain: associated with song pattern recognition, song discrimination, and the processing of auditory cues in birds
Hearing zebra finch songs = zenk gene mRNA levels increased = increase in the number of neurons in the neostriatum
Zenk gene: plays a role in zebra finch birdsong
exposed to the song of another species = reduced zenk mRNA response
Habituation: if a zebra finch is exposed to the same conspecific song repeatedly, mRNA levels return to baseline
Suggests: after repeated exposure, a zebra finch categorizes a song as familiar, so it no longer expresses zenk
Vole sociality - avpr1a (and vasopressin) experiment
- Avpr1a gene controls vasopressin receptors
- Long-version Avpr1a allele: associated with prosocial behaviours (parental care + affiliative interactions with mates)
Compared homozygous for long version of the allele and homozygous for the short version of the allele
- If avpr1a primarily responsible for male behaviours toward mates and offspring, then two lines should have different suites of social behaviour
= true
- Longer version homo males had more pup licking and grooming, also responded more positively towards familiar females
Great tits genomics experiment
Fox and mutations
Cognitively sophisticated strategies with respect to foraging and mate choice
Now used as a model system
Their entire genome sequenced
Background:
- Synonymous mutations = no effect on fitness
- Nonsynonymous mutations = fitness consequences
Experiment:
- Collected genomic data from different great tit populations
- Determine strength of natural selection at a locus: calculate the ratio of nonsynonymous to synonymous substitutions
- Higher ratio = likely that positive natural selection has occurred
Results:
- Genes linked to cognition were overrepresented in areas of the genome that showed evidence for positive natural selection
- Selection was strong on the FOXP2 gene
Conclusion: suggests that natural selection has favoured a suite of genes associated with cognitive functions linked to survival and reproduction in great tits
Territoriality in micro, sticklebacks, bees
Question: are there shared “genetic toolkits” employed in similar suites of behavior seen in widely divergent species?
Experiment: examined the behavioural response to territory intrusion in house mice, three-spined sticklebacks, and honeybees + sequenced mRNA from the brains of each
Results:
- House mice, three-spined sticklebacks, and honeybees share a genetic toolkit that includes G-protein-coupled receptors linked to territoriality.
- All species show similar patterns of gene expression with respect to a number of genes likely important in territoriality
Conclusion: Deeply conserved clusters of genes + deeply conserved gene expression patterns may help explain similar behavior in phylogenetically distant species
Tinbergen development
Examples
- In “on the aims and methods of ethology” Niko Tinbergen talks about how development is important to help shape an animal’s behaviour
“Development” including:
- In-utero effects
- Specific effects of environmental factors throughout an individual’s life
- Environmental factors including both biotic and abiotic factors
Development, Dispersal, and Climate Change - spiders
Numerous dispersal strategies, use environmental cues to choose which one to use
In spiders: E. Atra
- Rappelling or ballooning behaviour
Ballooning:
- Use silk threads to sail long distances - hundreds of yards
Rappelling:
- Use silk thread to create a bridge for short distance dispersals
- Use short distance rappelling during spring migrations when potential territories are abundant and less risky (crop land with abundance of habitats)
- Use long distance ballooning during fall migration when the chances of getting a suitable habitat close by others is small enough that ballooning to distances far away may be worth the costs of having little control where a landing will occur
- Use temperature as a cue of which strategy to pick - proven by controlled temp experiments
Development, Temperature, and Ovipositing Behavior in Parasite Wasps
Background:
temperature has strong effects on olfactory senses in insects = fitness effects
Parasitoid wasps lay eggs inside a host species, and adult females avoid hosts that have been parasitized
Question: would temperature that female larvae were exposed to during development affect their ability to learn how to find suitable hosts for laying eggs?
Experiment:
Raised female larvae in 4o C for either three weeks or twelve weeks + a control, then raised them at a normal temperature
Testing: presented females with three different patches that differed in the number of good hosts unparasitized/parasitized hosts
Results: exposure to cold during development affected:
Number of eggs a female laid inside a host
Female’s ability to discriminate among hosts of different quality: became worse at discriminating hosts using external cues on the host after it had been parasitized
Family Structure, Development, and Behavior in Prairie Voles
Significant variation in family structure
- ⅓ of pups raised by mother, ⅓ by mother and father, ⅓ by communal nest including their father and mother and others
- Looked at single mother category (SM) versus both parents (BP = biparental) and eventual parental behaviour of those offspring
- SM group pups left alone more often than BP group
- BP group received more grooming and licking
- Same amount from mothers in each group, just less overall in SM due to lack of father
Now adult offspring parental behaviour
- Raised in SM females = licked and groomed their pups less
- Raised in SM females and males = took longer to find a mate and bond with their mate than BP group
Early Nest Development and Behavior in Cichlid Fish: helpers
Background: In Cichlid fish, young in nests are raised by adults + older sibling “helpers”, both of them defend the nest and remove parasites from eggs and developing fry
Hypothesis: presence of both parents + helpers may provide young with behavioural skills that are beneficial in a species that lives in complex social groups, by:
Freeing up time for developing offspring to interact with others, rather than to be vigilant for predators
Serving as role models for the developing offspring, which could copy their actions
Experiment: raised newly born fish in groups together in different treatments:
- No adults present
- Adult male + female present
- Adult male + adult female + helpers-at-the-nest were present
Results: Fish raised with adults or adults + helpers displayed behaviours that were less costly in terms of energy but still very effective in defending their territories
Conclusion: Early environments experienced by Cichlid fish had important consequences for behavioural decisions later in life
Early Development and Its Effect on Parental Behavior in the Oldfield Mouse:Sibling nest helpers
Background:
Successful parental behaviour = the more offspring you raise (direct experience) + developmental factors early in life
Some female oldfield mice remain at the nest and help their mothers raise young
Question: Do females that remained at the nest during the rearing of their younger siblings become better mothers to their own offspring?
Experiment: Experimentally created inexperienced and experienced female oldfield mice by removing (or not removing) females from their natal nests
Results:
All females: became better parents as they produced more and more litters
IF females: built nests later + nests were not as good as those of EF
EF females: superior nest-building behavior = litters had a higher chance of survival
Conclusion: the developmental experience of being present when one’s mother raises offspring has long-term consequences for parenting abilities
Define habituation and sensitization
Habituation: A decrease in response to a stimulus after repeated exposure.
Sensitization: An increase in response to a stimulus after repeated exposure.
Explain the process of classical conditioning using the eye blink reflex
An air puff (US) to the eye causes an automatic blink (UR).
○ A tone (CS) is repeatedly paired with the air puff.
○ Eventually, the tone alone (CS) elicits a blink (CR).
What is extinction in classical conditioning?
The weakening and eventual disappearance of the conditioned response (CR) when the conditioned stimulus (CS) is repeatedly presented without the unconditioned stimulus (US)
Why are critical tests for associative learning needed?
To verify that changes in behaviour are due to associative learning and not other factors
Describe the three conditions used in critical tests for associative learning.
○ CS predicts US: Strong association, likely to result in associative learning.
○ Random control: No association, unlikely to result in associative learning.
○ CS predicts no US: The CS predicts the absence of the US, may result in inhibitory conditioning.
Associative learning and classical conditioning relationship
Basically the same
Associative learning occurs only when? Why?
Associative learning occurs only when: presentation of the CS is associated with increased probability of the US
- Animals have innate predispositions for associating certain stimuli (CS) with certain states (US)
- Animals consider both their prior knowledge and current experience to infer what relationships are likely to occur
- Posterior knowledge = some function of prior knowledge & new evidence
What is Bayes’ Theorem? - explanation
A mathematical formula that helps us understand how posterior probability relates to prior probability
Kinda like a ratio or a percent in probability?
Bayes’ Theorem - equation
DON’T MEMORIZE
P (H1⼁E) =
[P (E⼁H1) x P(H1)]
/ [(P (E⼁H1) x P(H1)
+ P (E⼁H2) x P(H2)]
P (H1⼁E): posterior prob. for H1 given evidence
P (H1): prior prob. for H1 before any event
P (H2): prior prob. for H2 before any event
P (E⼁H1): prob. for evidence given that H1 is true
P (E⼁H2): prob. for evidence given that H2 is true
Bayes’ Theorem what is a proof
Change prior probabilities and redo the calculation
(ex. general probability of HIV test positive vs. probability of positive for a high-risk patient)
How does Bayes’ Theorem apply to animal behaviour?
Animals use Bayesian-like computations to make decisions in uncertain and variable environments.
They combine prior knowledge and new evidence to update their beliefs and adjust their behaviour.
Bayesian inference about the cause of illness
The prior probability of novel food being the cause of illness is much higher than that of noise, so animals are innately tuned to the possible association between taste and food-poisoning
- (we have innate biases that are similar to the ones we get from bayes)
Variation + uncertainty examples
Variation: Food, predation risk, competitors, mates
Uncertainty: Food to last the night/winter, surviving to the next breeding season, winning the next fight for food/safe feeding location/females, mating for males, successful reproduction for females
Coping with variation + uncertainty
Variation:
- Learning/sampling
- Accepting variation + being prepared to deal with it
Uncertainty:
- Body fat
15-30% of body weight = 2 months no food
- Caution
- Alertness
- Learning
- Sharing (food, defence etc.)
- Forecast (air pressure)
- Insurance (humans)
What is the Rescorla-Wagner model?
When a CS and US are paired, the change in the strength of their association (ΔVt), changes proportionally to the learning rate (α), the difference between the maximum strength possible (λ), and the current strength (V)
Discrete Rescorla-Wagner equation
Vt+1
= Vt + ΔVt
= αλ + (1-α)Vt
What are the weaknesses of traditional approaches to studying learning?
They often rely on artificial laboratory settings, may not reflect natural behaviour, and ignore cognitive processes.
What is anticipatory conditioning?
A type of learning where animals associate cues with events and adjust physiologically in anticipation of those events.
Ex. humans may experience less intoxication from a familiar alcoholic beverage (fav. beer) than an unfamiliar drink (green peppermint) due to anticipatory physiological responses.
Coffee mix up results
When drank oj with same amount of caffeine
- drinking caffeinated drink not previously associated with caffeine will result in stronger effects of caffeine compared with the effects of drinking familiar coffee
- bc no physiological prep
When drank decaf
- Unknowingly drinking decaf in your regular coffee mug and regular time = headache
- Might still feel more alert = placebo
How does skipping regular morning coffee cause headache?
- Caffeine causes constriction of blood vessels in the brain
- Physiological adaptation to caffeine involves relaxation of cerebral blood vessels to counteract caffeine effect
- Skipping regular morning coffee thus = headache
Do all animals do social learning
NO
There is either no or limited social learning in many animal species
- it’s important when there is some
- we study it bc we also do social learning
Bumblebee wasp - no social learning
Both sexes show individual learning:
- Each individual is on its own: there is neither social interactions (just male fighting) nor social learning
- This is typical to most animals
2 (probably) social learning anecdotes
Potato washing in monkeys:
- Imo the monkey (Japanese macaque) was the first individual who washed potatoes to remove sand
- Other monkeys started to do the same later
- Is it social learning? Cultural transmission
Milk-bottle opening by blue tits:
- Blue tits learned to peck the top of the bottle and get the cream
Graph:
- The behaviour was first observed in England in the 1920’s and spread rapidly among blue tits
- Some kind of social interaction was probably involved because of the rapid spread…
- There is no empirical evidence for either social learning in general or imitation in particular in this case
Weakness of probable social learning anecdotes
They are not controlled experiments, (but inspire such experiments)
Social learning
learning from others
Information
anything that reduces uncertainty
Private vs public information
Private information: inaccessible to others
Non-private information = social information:
- just by being somewhere or doing something, you unintentionally/inadvertently provide info
- Social info is vicariously acquired (vicarious = substituted for experience)
Two types of social information
Cues: Inadvertent social information (ISI). Unintentionally providing information because other people are at that place or doing that thing.
Public info OR location cues
Signals: Intentionally communicated information
- ex. signs
3 benefits of social (vs individual) learning
- Social learning can be much faster + safer than individual learning because one can avoid much of the trial and error that accompanies individual learning
- Social learning across generations prevents the loss of information upon an individual’s death
- A rare individual’s insight can spread rapidly within populations and across generations