lecture 6- host defence and immunity Flashcards
resident biota
human body contains many habitants
-same body part can harbour different (but stable) communities at different times
Microbiota:
The community of microbes that lives in a specific part of the body
-bacteria, archaea, eukarya, VIRUSES
microbiome
The collection of organisms, their genomes and genes
-microbial ecosystem understood through genetics
Skin Microbiota
Acquisition: starts in birth canal and continues through environment (interaction c/ microbes is good - form immunity)
- Variety of Environments
- Acidic pH (pH 4-6)
- High in Salt, low water
Organisms: Resident -Staphylococcus app Transient -Propionibacterium acnes Anaerobic -Haemophillus spp. -Mycobacterium spp. -Bacillus spp. (usually from soil) -Candida spp. (eukaryotic yeast)
The eye microbiota
acquisition: the environment
- harsh environment for bacteria d/t constant flushing and lysozyme in tears
-transient bacteria Usually skin flora: S. epidermidis And various diphtheroids
E. Coli
Klebsiella
Proteus
environmental contact c/ microbes cause Diseases:
S. pneuomoniae
H. Influenzae
Various virus’
microbiota: oral and nasal
Acquisition:
Birth canal, caregiver contact, Food, water, and fingers.
-protection:
Saliva, lysozyme
Cutaneous tissue
Immune surveillance
resident and transient microbes
Birth: Neisseria spp. (non-pathogenic) Streptococcus Spp. Actinomyces Spp. Lactobacillus Spp.
Teeth: Prevotella Fusobacterium S. mutans S. salivarius (500+ sp.)
resident microbes
benefit host - help us do things
transient microbes
non-essential; may be pathogenic
why do dentists often administer antibiotics to its with a heart murmur?
S. aureus, S. epidermis are residents in mouth. Direct connection from mouth to heart c/ arteries and veins increase the change of these microbes getting into blood
-pt c/ murmur have pooling blood in heart where bacteria could grow
Microbiota: respiratory
unsure of acquisition
- all microbes are transient
- have “mucocilary escalator” to bring out foreign substance.
-Biolfilm formers: S. pneumoniae P. aeruginosa H. influenzae K. pneumoniae
what micro was responsible for cystic fibrosis
p. auruginosa
lower Gi tract anatomy consists of?
Stomach Duodenum Ileum Jejunum Colon Ascending Transverse Descending -7 different types of cells for absorption, protection, ect. Environment is extremely diverse throughout the gi tract
microbiota: stomach
Acquisition: As a fetus, baby formula, food & water, tasting their environment.
-protection: Acidic Environment (pH ~2-4)
- resident and transient bacteria
- Helicobacter pylori and its role in gastritis and peptic ulcer disease was discovered by drinking bacteria, producing ulcer , treating it
V.cholerae (pathogenic) – killed at pH 4 (if malnourished pH rises and this pathogen can cause disease)
culture independent method?
NGS
microbiota: the intestines
Duodenum (pH 8)
10 000 microbes
Jejunum (pH 8)
10^7 mm^3
Ileum & Colon (pH 5-7)
1011 / gram of faces
*over 1000 species
microbiota: urogenital
acquisition - surrounding external environment (usually comes in backwards - not through kidney)
protection: constant flushing
Transient (most) Aerobic residents (some)
distal urethra:
S. epidermidis
Enterococcus spp.
Ecosystem
composed of communities (exchange c/ each other and their abiotic environment)
-stble ecosystems provide benefits (O2 production, water filtering, vitamin production)
meta-organism
human body
-co-evolved with specific communities of microbes: help us grow and develop
host-microbe interactions : -maintains community of commensals and symbionts
- helps prevent establishment and expansion of pathogens
- supports healthy function of metabolic processes
commensal organisms
-can be opportunistic but they only take / we supply them they don’t give anything back
symbionts
mutualistic relationship
how do microbiota differ between humans?
differs
why does the micro biome differ between body parts?
Particular niche requirements (ex: oxygen, pH, sugar, etc.)
Extracellular components that interact with receptors in host
explain the three basic steps of pathogen-human interaction
- contact
- infection
- disease
infection
A condition in which pathogenic microbes penetrate host defences, enter tissues and multiply
infectious disease
disruption of tissue or organ (pathologic state) caused by microbes or their products
pathogen
Parasitic relationship with its host; results in infection and disease (in susceptible individuals)
what does type and severity of infection depend on (4)
- Pathogenicity of the organism
- Dose
- Condition of the host
- Portal of entry
pathogenicity
an organism’s potential to cause infection or disease