Lecture 5 Flashcards
Point Mutations
Alteration of single base pair of DNA
Types of point mutations
Substitutions
Insertion or Deletion (INDEL)
Types of substitution mutations
Transition
Transversion
Transition
Changing a purine to a purine
or pyramidine to pyramidine
Transversion
Changing a purine to a pyrimidine
Or a pyrimidine to a purine
Classification for substitutions in protein coding DNA
Synonymous
Conseravtive missense
Nonconservative missense
Nonsense
Synonymous mutation
affects a codon in a position that does not alter the encoded amino acid
Missense mutation (conservative)
affects a codon so that a different amino acid is incorporated, but the “new” amino acid has similar properties as the “old” one
Missense mutation (nonconservative)
affects a codon so that a different amino acid is incorporated, but the “new” amino acid has different properties than the “old” one
Nonsense mutation (aka stop mutation)
changes a codon into a stop codon, causes premature termination (truncation) of the protein
Classification for INDELS in protein coding DNA
Frameshift mutation
Frameshift mutation
Since the reading frame is read in units of three nucleotides, a single base pair insertion or deletion within the reading frame will alter all codons from this point on until a stop codon is encountered.
Classification for INDELS and substitutions anywhere in the gene
Silent mutation
Silent mutation
mutations have no effect on the function of encoded protein/RNA, regardless of which part of the gene is hit.
Codon
Nucleotide triplets
T/F the genetic code is based on nucleotide quartets
False
Nucleotide triplets
Degenerate code
64 codons encode 20 amino acids and three termination signals
Wobble
Third position of codon is variable for 18 amino acids
In the third position of the codon, which would be less dramatic: transition or transversion?
transition
T/F point mutations in non coding dna are not harmful
False
Give examples of human disorders caused by point mutations
Cystic fibrosis
Preaxial polydactyly
SNPs
single nucleotide variations in the genome, which originated from point mutations and became “fixed” in the population
common” SNPs
occur > 5% in a population
Rare “SNPs”
< 5% in a population
Somatic mutations
Mutations in body cells
Genetic mosaic
contains somatic regions that are genotypically different from each other