Lecture 4: Downstream Processing Flashcards

You may prefer our related Brainscape-certified flashcards:
1
Q

What is mass transfer?

A

“process of transport from one phase to another”

Phases can be: liquids, solids or gases

Phases can be miscible or separate e.g., gas & liquid, solid & liquid, oil & water

Concentration difference typically drives transferW

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are the applications of mass transfer?

A

Distillation
Crystallisation
Gas adsorption
Nutrient supply

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What are the phases of mass transfer

A
  1. Transfer within gas/oil to liquid interface
  2. Transfer across gas/solid/oil interface into liquid phase
  3. Transfer from liquid to cell boundary
  4. Diffusion across cell boundary to cell surface
  5. Diffusion into cell to reaction center
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What are the principles of mass transfer?

A
  1. Mass transfer can limit growth by restricting nutrient supply
  2. Defined by Ficks Law
    “J = -D deltaC/deltaX”
  3. Growth is limited via:
    A. in phase transfer: slow
    diffusion or long
    distance
    B. Between phase transfer:
    exchange across
    interface can be rate
    limiting. Large clusters
    of cells can deprive
    middle cells of nutrients
    C. Across cell membrane:
    unless transporters,
    diffusion can be slow
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are the effects of limited mass transfer?

A
  1. limitation of output:

a. overall reaction rate = slower. Eg. formation of Glucoronic acid from glucose by Gluconobacteroxydans

b. Alternate metabolic pathways switched on. E.g., preparation of bakers yeast

  1. Large scale bioreactors designed to optimise mass transfer
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

How can mass transfer be optimised in bioreactors?

A
  1. mixing: without shear force, heterogeneity in the chemostat
  2. Particle size: small separate granules dissolve faster, smaller gas bubbles increase SA
  3. Pressure: can help with gas/liquid driving force
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What are the different types of bioreactor?

A

1 Stirred tank reactors
2 bubble column bioreactors
3 airlift bioreactors
4 solid & fluid phase bed reactors

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What is the stirred tank bioreactor?

A
  1. stirred tank vessels
  2. aeration via gas exchange
  3. baffles connected to stirrer
  4. mixing through stirring, controls nutrient and gas distribution
  5. Typically multiple baffles to increase mixing
  6. impeller type, length, and liquid viscosity are related to “shear rate” (measure of mixing efficiency)
  7. Shear rate is related to “shear stress” (which can damage cells) & also E req to turn impellers in viscose liquids
  8. Shear stress can be minimised by larger fermenters, stirring at 120rpm for animal and plant cells, filamentous and mycelical cultures. Planktonic microbials >300rpm
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What is a bubble column bioreactor?

A
  1. Gas stream forms tiny bubbles at base of reactor
  2. density causes bubbles to rise
  3. diffusion of gas through the reactor from bubbles
  4. mixing of nutrients through bubbling
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What are the pros and cons of bubble column bioreactors?

A

+ high aeration with mixing
- Foaming a problem
+ suited for wastewater and less viscous fermentations
- poorly controlled and can be poor mixing

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What are airlift bioreactors?

A
  1. Based on bubble column
  2. gas used to create a flow, causing nutrient mixing
  3. concentric is most common
  4. multiple types of ALR:
    a. internal-loop split
    b. internal-loop concentric tube reactor
    c. External loop
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What are fluid and solid phase bioreactors?

A
  1. Particles used to prod product from feed
  2. Particles sink away from effluent which is harvested
  3. solid phase can contain bacterial biofilms, enzymes, etc
  4. no gas, so generally anaerobic
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What are hollow fiber bioreactos?

A
  1. often used for mammalian cells
  2. porous fibers stimulate blood vessels
  3. nutrients and waste flow through hollow fibers
  4. cells can grow on surface of fibers
  5. cells and secreted proteins can accumulate in the interfiber space
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is downstream processing?

A
  1. Products of microbial activity include: biomass & or products trapped inside cells, soluble & secreted products
  2. most of processing can determine viability of commercial process
  3. yield is lost at each step of an isolation or purification
  4. multiple products can sometimes be obtained from a single fermentation
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is clarification

A
  1. separation of cells from liquid
  2. multiple methods depending on cells:
    A. waste water/brewing use settling/floccation
    B. centrifuging can be used on smaller cells
    C. Filtration often used to remove small/trace cells
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What is cell lysis

A
  1. Mechanical: bread mills, homogenisers, ultrasonic disruption
  2. Non-mechanical: osmotic shock, chemolysis (surfactants)
17
Q

Concentration of products in liquid?

A
  1. Evaporation: can help for volatile products as part of distillation. Liquid can be frozen (lyophilisation)
  2. Precipitation: addition of salts (NH4)2SO4 to precipitate proteins. Addition of organic solvents to precipitate organic compounds (will denature proteins)
18
Q

How are products purification

A
  1. Extraction: Many organics are extracted using organic solvents (antibiotics, vitamins, alcohols, etc)

A. add non-miscible solvent (eg iso-butanol) with higher solubility for organic agitate. The organic will be extracted into solvent according to the “partition coefficient”

  1. Crystallisation

A. Solvents can be evaporated and organics can be extracted as solid crystals

19
Q

Ultrapurification

A
  1. chromatography is often used to obtain >99.99%
  2. req for pharma grade products
  3. Chromatography is expensive for yield, materials and time, so not used for low value products
  4. proteins often pruified
20
Q

What is protein column chromatography?

A
  1. Gel filtration (yield typically <90%)
  2. adsorption
  3. ion exchange
  4. affinity chromatography

All bar gel filtration, yield typically <70%.

3 column purification can lose over 60% of product

difficult to seperate all the proteins within a cell

21
Q

What are sigma products?

A

Alkaline phosphatase from bovine intestinal mucosa.

Unit = 1mol 4-nitrophenyl phosphate hydrolysed min-1

P7460 10 units/mg. 11.6p/unit