Lecture 3 – MEMBRANES, IONS, WATER AND PROTEINS Flashcards

1
Q

Polarity

A
  • Basic meaning: ends/ sides are different
  • Epithelial cell: structural polarity
  • Magnet: magnetic polarity
  • Membrane: electrical polarity
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2
Q

Water

A
  1. All life exists in an aqueous environment
  2. Molecular properties of water influence the structure and behaviour of cells
  3. Neurones are directly linked to water
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3
Q

Hydrogen bonds

A
  • Electronegativity allow ‘hydrogen bonds’ to occur between adjacent/ neighbouring water molecules allowing it to form a lattice when in ice form
  • Oxygen ‘sucks’ electrons away
  • Hydrogen atom is shared between two electronegative atoms
  • Relatively weak
  • Highly directional
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4
Q

Water is unique

A
  • Hydrogen bonds allow water to be a liquid at room temperature
  • Compounds with similar, or greater RMM than water are gases
  • In liquid state, it’s a loose lattice
  • In a solid state, the arrangement of H-bonds are much more ordered
  • Ice is less dense than water
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5
Q

The Ions

A
  • An ion is any atom or molecule that has gained or lost one or more electrons and are defined by a charge
  • Carry signals around the body in the form of action potentials
  • Act as an energy store which is secondary active transport
  • Interact biochemically with proteins and other molecules:
    1. Ca2+/ troponin C in muscle contraction
    2. Mg2+/ ATP
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6
Q

Biologically Important Ions

A
  • Physiologically useful ions act as charge carriers and energy stores
  • Biochemically useful ones take part in enzyme reaction or form part of proteins
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7
Q

Ions in an aqueous solution

A
  • Can form electrostatic interactions with water
  • Water molecules align themselves to maximise these interactions so the negative oxygens can interact with the ion
  • The layer of water molecules immediately in contact with the ion is termed primary hydration shell/ layer
  • Negatively charged ions, the hydrogen interacts with the ion and forms the opposite way around
  • Looser shell is the secondary hydration shell/layer
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8
Q

Ionic ‘size’ = Ionic Radius?

A
  • The size of the hydration shell depends on the charge density of the ion
  • Smaller the ion, the higher the charge density and the larger the shell
  • Smaller ions have lower mobility in solution than larger metal ions with the same charge
  • Hydration shell affects interactions/ mobility with proteins
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9
Q

Membranes

A
  • polar heads of phospholipids interact with water which drives the formation of the bilayer
  • charged substances such as ions, and even moderately sized uncharged polar molecules like glucose, find it almost impossible to pass through bilayers
  • very small molecules like ethanol, water and gases find it easier to pass through
  • membranes are essentially impermeable to ions
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10
Q

Membrane Proteins

A
  • allow cells to establish ion gradients and use them – impermeable to ions
  • form pathways for ions
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11
Q

Pumps/ ATPase

A
  1. concentration of ions against gradients REQUIRES energy
  2. The Sodium Pump
  3. Basic features of pumps:
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12
Q

Ion Gradients as ‘batteries’

A
  • Gradients represent a source of energy
  • Can be used to power cellular processes like the transport of other ions via carriers (2nd class)
    Can be used to transmit information by signalling via ion channels
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13
Q

Secondary Active Transport Carriers

A

Carrier refers to a general class of proteins that bind a substrate on one side of the membrane to undergo a conformational change which leads to the protein moving and releasing the substrate on the other side (inside)

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14
Q

Carriers can be very effective

A
  1. Couple downhill flow of ions to uphill flow of a different ion
  2. Don’t use energy from ATP directly – energy comes from gradient of downhill ions
  3. Antiporters
  4. Symporters
  5. Not all involved in active transport – many are passive and serve to transport polar substrates down their concentration gradient
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15
Q

Ion Channels

A

ROLE – mediate ion flux through membranes
DISTRIBUTION – everywhere from bacteria to humans
EVOLVED FOR ALL MAJOR PHYSIOLOGICAL IONS – Na+/ K+/ Ca2+/ Cl- channels

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16
Q

Basic properties of ion channels

A
  • Transmembrane proteins
  • Passive transport: ‘protein lined hole’ – provide a hydrophilic pathway for ions to travel through hydrophobic regions
  • Selectivity: fussy regarding ions – a filter
  • Gating: opening and closing is controlled
17
Q

Voltage-gated channels

A
  • Pores which let ions through
  • Open in response to changes in membrane potential
  • Have a voltage sensor which tells channel to open
  • Coupling mechanism which couples channel opening to voltage sensing
  • Inactivation mechanisms which closes the channel
  • Tetramer of four equivalent subunits
18
Q

Ligand-gated ion channels

A
  • Open in response to binding of an activating ligand (agonist) – acetylcholine
  • Have pores to let ions through
  • Ligand binding site which tells channels to open in response to a ligand binding
  • Coupling mechanism which couples channel opening to ligand binding
  • Desensitization mechanisms which closes the channels if ligand binds for too long
  • Pentamer of five similar subunits