lecture 20 Flashcards

Molecular Pathogenesis of Alzeimer's disease I - general background on Alzheimer's disease - amyloid β peptide aggregation and its role in Alzheimer's disease pathogenesis - Tau microtubule protein and its role in Alzheimer's disease pathogenesis - contributing factors to alzheimer's disease - Oxidative stress - contributing factors to Alzheimer's disease pathogenesis - Biometals - contributing factors to Alzheimer's disease pathogenesis - Neuroinflammation

1
Q

When was Alzheimer’s ‘discovered?

A
  • 1906 - German neuropathologist Alois Alzheimer studied a patient called Auguste D: wrote up the first documented case of the disease that was to be named after him
  • examination of Auguste D’s brain after death by Alzheimer revealed ‘globs’ of sticky protein (amyloid) between neurons and tangled bundles of fibrils in neurons (neurofibrillary tangles)
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2
Q

What are milestones in the history of Alzheimer’s disease?

A
  • 1910 - 1940: belief that “senile dementia” is a normal part of aging process
  • 1960s: AD believed to be a distinct disease (age-related dementia), not just aging
  • 1984: Amyloid β peptide purified and sequenced from AD plaques (Colin Masters, University of Melbourne)
  • 1992: amyloid cascade hypothesis developed
  • 1994: oxidative stress is an important feature of AD
  • 1994: role of metals in amyloid plaque formation
  • 1998: amyloid oligomers shown to be more important to AD memory impairment than amyloid plaques
  • 2000 onwards - development of drugs to target amyloid generation or increase its removal (clinical trials)
  • unknown! - why amyloid aggregates and induces neuronal damage and death only late in life
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3
Q

Why study this disease?

A
  • estimated 35.6 million patients in the world (more than 500,000 in Australia)
  • estimate of 114 million patients by 2050 - World population is rapidly aging - will result in dramatic increase in AD patients
  • current world wide cost to health care US$604 billion/year
  • chance of getting AD doubles every 5 years after 65 (1 in 4 chance of getting AD after 80)
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4
Q

What is the general neuropathology of Alzheimer’s disease?

A
  • gross atrophy (shrinkage) of the brain (characteristic but not specific to AD)
  • extracellular neuritic (amyloid) plaques
  • intraneuronal neurofibrillary tangles
  • cerebrovascular amyloid (cerebral amyloid angiopathy, CAA)
  • activation of microglia, hypertrophy of astrocytes
  • degree of dementia/memory impairment (amnestic dementia) in AD correlates with loss of synapses
  • loss of neurons as disease progresses
  • amyloid plaques appear as dark circular structures throughout the grey matter
  • accumulation of amyloid in the vasculature of the brain
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5
Q

What are amyloid plaques?

A
  • aggregated amyloid β peptide (forming fibrils)
  • green-red birefringence with congo red stain
  • many non-amyloid β components in plaques
  • high concentration of metal ions
  • readily turned over in the brain
  • may be ‘end point’ of amyloid pathway
  • associated with secondary inflammation
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6
Q

What is amyloid?

A
  • term amyloid first coined by Virchow in mid 19th century (meaning starch or cellulose)
  • amyloidogenic means that protein aggregates appearing red microscopically in normal light but green when viewed in polarised light after staining with congo red dye (termed birefringence)
  • distinct from amorphous protein aggregates (that have no structure)
  • fibrillar nature and β pleated sheet configuration described by electron microscopy in 1959
    • form non-bracing fibrils of up to 8nm in diameter
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7
Q

How do we get amyloid formation?

A
  • formation of fibrils is not specific for a primary protein sequence
  • amyloidogenic proteins can begin as unstructured monomers (little alpha-helix or β-sheet structure)
  • with increasing concentration or under certain environmental conditions, β-sheet structure increases
  • monomers begin to form parallel β-sheet structure (protofibril)
  • protofibrils mature into fibrils and form plaques

monomeric –> protofibrils –> mature fibrils –> amyloid plaques

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8
Q

What is the amino acid sequence of Aβ monomer?

A

DAEFRHDSGYEVHHQKL
VFFAEDVGSNKGAIIGLM
VGGVVIA

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9
Q

How does oligomeric Aβ compare to fibrillar Aβ?

A
  • monomeric Aβ peptide can aggregate to form fibrillar amyloid
  • monomeric Aβ can form oligomeric species consisting of 2-10+ monomers packed closely together
  • oligomers may become cross-linked by a specific amino-acid modifications (e.g. di-tyrosine cross-link) increases stability of oligomer
  • oligomers are thought the be the primary toxic form of Aβ
  • small solubule oligomers –> in vitro neuronal function –> synaptic damage and neuronal cell death
  • extended fibrils also follow that path and:
  • -> amyloid –> ? inert storage form
  • moves backwards and forwards
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10
Q

How is amyloid generated?

A

Generation of amyloid β peptide:

  • amyloid β is hydrophobic 40-42 amino acid peptide
  • cleaved from a larger Amyloid Precursor Protein by ‘secretases’ (proteases)
  • cleavage occurs at the membrane and amyloid β (Aβ) is released into the extracellular space (but can be recycled back into the cell by endocytosis )
  • amyloid deposits form between cells (brain parenchyma)
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11
Q

Which peptide tends to aggregate more in Alzheimer’s disease?

A

42

40 seems to be more normal

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12
Q

How do we get cleavage of Aβ from APP?

A
  • cleavage is by beta secretase (B-secretase or VACE) and then gamma secretase (γ-secretase) to release Aβ from APP
  • APP can also be cleaved by α-secretase at a different site and this prevents Aβ from forming
  • the remaining APP can be released as soluble APP
  • cleavage is known to occur on the membrane of neurons in the grey matter of the brain (especially the cerebral cortex and hippocampus)
  • the end part of the APP molecule when cut by alpha-secretases seems to have a protective effect
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13
Q

Why is there a bit of a problem in the way we understand/research disease processes?

A
  • tend to focus on what we can see easily
  • easy to see accumulation of amyloid protein
  • there may be changes that we can’t see that are even more important e.g. APP intracellular domain
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14
Q

What is Amyloid Precursor Protein?

A
  • integral membrane protein concentrated at synaptic connections in the brain
  • gene is located on chromosome 21. Downs syndrome (extra Chr 21) over produce APP and Aβ
  • APP has domains with different functions such as growth factor-like domain, protease inhibitor domain and metal binding domains
  • APP undergoes extensive post-translational processing (phosphorylation, glycosylation and cleavage)
  • the function of APP is unknown but a lot of activities have been described:
    • growth promotion
    • regulation of synaptic function
    • metal homeostasis
    • cell signalling
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15
Q

What is amyloid turnover?

A
  • origianlly thought that amyloid plaques were long lasting or permanent
  • now believed that they are rapidly formed and degraded but the total number increases with age
  • amyloid accumulation (plaques or oligomeric forms) depends on synthesis and degradation
  • small changes in either can affect the total accumulation
  • ~8% of total CSF amyloid is turned over every 36 hours
  • proteases in the brain degrade amyloid peptide leading to its clearacne
    • insulin degrading enzyme
    • neprilysin
    • matrix metalloproteases
    • angiotensin converting enzyme
  • reduction in protease activity has been observed in AD brain
  • microglia can also remove amyloid, especially aggregated peptide and plaques
  • recent studies suggest that even a 2% difference between production rate and clearance rate in AD patients may result in accumulation
    • potentially, only small decreases in production or small increases in degradation could shift the balance in favour of clearing amyloid as a therapeutic treatment
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16
Q

What is the normal function of amyloid?

A
  • antioxidant molecule

- modulating metal (copper, zinc) homeostasis

17
Q

What is the abnormal function of amyloid?

A
  • aggregation into amyloid
  • aggregation into oligomers
  • neurotoxic effects
  • inflammation
18
Q

What are neurofibrillary tangles?

A
  • protein aggregates found within neurons in AD brain (also called paired helical filaments)
  • tangles are composed of hyperphosphorylated form of a microtubule protein called tau
  • the hyperphosphorylation causes tau to become insoluble and aggregated into NFTs (filaments of protein twisted together in pairs)
  • also associated with tauopathies (frontotemporal dementia)
19
Q

Where is tau under normal conditions? What does it do?

A

attached to microtubules
allows normal function of cell
(structure, movement, intracellular transport)

20
Q

What happens when tau is hyperphosphorylated?

A

tau releases from microtubules resulting in abnormal cytoskeletal structure and inhibition of intracellular transport

paired helical filaments
phosphorylated by proteins such as GSK3 and cdk5

21
Q

What can further inhibit the degradation of NFTs by the cell?

A

increased oxidative stress in the neurons that can cause cross-linking, further inhibiting the degradation of NFTs by the cell

22
Q

What is the BAptist vs TAUist argument?

A

disagree as to main cause/route of progression of AD
i.e. what occurs first

cause:
tau hyperphosphorylation (NFTs) vs amyloid beta deposition (senile plaques) 

consequences:
amyloid beta deposition (senile plaques) vs tau hyperphosphorylation (NFTS)

synaptic damage and neuronal degradation

23
Q

What are contribution factors in Alzheimer’s disease?

A
  • age
    • simply don’t get AD when you’re 20
    • something that is occurring across decades that we can’t see that is driving this process
    • so many neurons it could take years or decades before loss affected neuronal function
    • the changes seem to be related to slow accumulation of damage of years/damage
    • able to see earlier stages with improved technology
  • oxidative stress (metals)
  • loss of normal neuronal metal homeostasis
    • linked to oxidative stress
  • inflammation
24
Q

What are oxidative and nitrosative stress?

A
  • excessive production of oxygen/nitrogen-based radicals
  • ‘leakage’ of molecular intermediates from the mitochondrial electron transport chain
  • imbalance between generation and removal of radicals (reactive species)
  • balance between need to use oxygen for energy and develop of free radicals
  • superoxide dismutase
  • peroxynitrite
  • hydroxyl radical
25
Q

What are sources of oxygen radicals in AD?

A
  • mitochondrial respiratory chain
  • brain has high oxygen consumption and low antioxidant levels (compared to the amount of oxygen it’s consuming)
  • non-dividing cells build up oxidatively damaged molecules
  • amyloid beta can induce radicals
  • metals (copper and iron) can catalyse free radicals
  • inflammation (macrophages release radicals)
26
Q

What are short term consequences of excessive oxygen radicals?

A
  • lipid peroxidation (malondialdehyde and hydroxynonenal)
  • protein oxidation (carbonyl modified proteins)
  • DNA oxidation and strand breaks
27
Q

What are downstream effects of oxidative stress?

A
  • neurotoxic actions of altered lipids - apoptosis
  • accumulation of aggregated protein - disruption to normal protein turnover and axonal transport
  • DNA damaged - altered transcription
28
Q

What is the altered biometal homeostasis in AD?

A
  • early studies found aluminium in plaques (minute quantities and unlikely to have any role in disease)
  • strong evidence for altered zinc and copper metabolism in AD brain
  • high levels of copper and zinc found in AD plaques
  • high extracellular levels of copper and zinc in AD brain regions where neuronal degeneration is highest
  • evidence for localised extracellular copper and zinc accumulation in neurodegeneration
  • concurrent decrease in intracellular or bioavailable biometals in diseased brain
  • metals are the main source of free radical generation in the brain
  • amyloid beta binds copper and zinc at several sites involving histidine and tyrosine amino acids
  • binding of metals by Aβ
    • promotes aggregation of the peptide
    • copper induces formation of neurotoxic oligomers
    • copper causes cross-linking between Aβ monomers to form stable neurotoxic dimers
29
Q

What are the main source of free radical generation in any biological system?

A

biometals e.g. Cu, Fe

30
Q

What are amyloid metal interactions?

A
  • amyloid deposits contain large amounts of copper and zinc
  • Aβ has binding sites for copper and zinc
  • binding sites involve metal co-ordination by histidine and methionine/tyrosine residues
  • zinc binding to Aβ may prevent formation of neurotoxic oligomers by displacing copper
  • Cu(II) can be reduced to Cu(I) by Aβ - resulting in formation of free radicals (damage proteins, lipids etc = neurotoxicity)
  • the free radicals can also further enhance Aβ aggregation and cross-linking to enhance toxicity of the peptide
  • metals are excreted from the neuron (through exocytosis) and are trapped by Aβ - enhances aggregation into oligomers (toxic)
31
Q

What are sources of inflammation in AD?

A
  • resting resident brain macrophages (microglia) become activated
  • infiltration of peripheral monocytes
32
Q

What initiates infiltration of inflammation in AD?

A
  • likely response to aggregated amyloid

- response to degenerating synapses and neurons

33
Q

What are consequences of inflammation in AD?

A
  • release of neurotoxic cytokines
  • increased free radical production
  • further damage to neurons and synapses
34
Q

So in summary, what is alzheimer’s?

A
  • age related disease affecting over 65 (except genetic forms)
  • characterised by:
    • loss of memory and higher brain function
    • brain atrophy
    • extracellular amyloid plaques
    • intracellular neurofibrillary tangles
    • gliosis (activated microglia and hypertrophic/swollen astrocytes)
35
Q

What are amyloid plaques? (summary)

A
  • composed of amyloid beta peptide
  • amyloid is bi-refringent (red under normal light and green/yellow under polarising light when staind with the dye Congo red)
  • amyloid peptide:
    • undergoes conversion from predominantly alpha-helix to high β-sheet content
    • aggregates - monomers align/stack - cross-linked
    • forms neurotoxic oligomers (dimer, trimer etc)
    • forms fibrils (probably inert and make up amyloid plaques)
36
Q

What is amyloid beta? (summary)

A
  • derived from larger Amyloid Precursor protein (APP) by cleavage with secretases (BACE and gamma secretases)
  • released into extracellular space
  • APP is a large transmembrane protein with several domains and a number of potential functions (potential synaptic function) - role in AD (other than source of amyloid peptide is unknown)
37
Q

What is tau? (summary)

A
  • intracellular microtubule associated protein
  • becomes hyperphosphorylated on a number of amino acids in AD (by several kinases)
  • hyperphosphorylation causes breakdown of microtubules and loss of cytoskeletal integrity
  • aggregation of phosphorylated tau into fibrils results in formation of NFTs - neurotoxic (can kill neurons)
38
Q

What are contributing factors in AD? (summary)

A

oxidative stress

  • free radical (reactive oxygen species) mediated damage to proteins, lipids and DNA (probably from biometals/Aβ)
  • higher in non-dividing cells (neurons in brain) which accumulate oxidatively damaged molecules and have lower antioxidant levels and high oxygen use (oxygen required for ox stress)
  • oxidatively altered molecules disrupt normal cell processes

biometals

  • accumulate in amyloid plaques to high levels
  • copper, zinc, and iron
  • bind to Aβ - promote aggregation and neurotoxicity
  • generate free radicals and oxidative stress

neuroinflammation