lecture 2 Flashcards

1
Q

compound microscopes

A

-multiple lenses
-commonly used
-ocular lens (fixed magnification)
-objective lens (variable magnification)

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2
Q

light microscopy

A

light passes through a cell and undergoes little change in amplitude but phase of light is changed
–> visible differences

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3
Q

incident white light in light microscopy

A

shows change of phase of waves

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4
Q

if you stain a cell… (light microscopy)

A

waves will be out of phase
–> some stains localize to different cellular components

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5
Q

How to prepare samples for light microscopy

A
  1. prepare thin sections
  2. fixation
    -preserves cell
    -formalin, glutaraldehyde are used to cross-link proteins to DNA
  3. staining
    -adds colour for contrast
    - can bind to particular molecules in a cell
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6
Q

Dye charges

A

cations bind to - charge groups on proteins, nucleic acids

anions bind to + charges on proteins, phospholipids

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7
Q

fluorescence microscopy

A

light is absorbed at one wavelength and emitted at longer wavelengths!!!

ex.
absorption max of 358 nm
emission max of 461 nm

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8
Q

What are the two filters that fluorescence microscopes have?

A
  1. filters light before hitting the specimen
  2. blocks all light except wavelength of the light emitted by the excited fluorescent dye
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9
Q

immunofluorescence microscopy

A

fluorochromes (fluorescent dyes) can be attached to specific antibodies

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10
Q

what is the problem w fluorescence microscopy?

A

blurry. volume image– overlaps

–> use confocal fluorescence microscopy

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11
Q

confocal microscopy

A

volume of image is a lot smaller/thinner
focal lens

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12
Q

3D structures can be constructed using

A

multiple 2D images taken at diff planes of focus

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13
Q

resolving power

A

ability of an imaging device to separate points of an object that are located at a small angular distance

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14
Q

Light microscope induces

A

bright-field, phase and fluorescence

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15
Q

Electron microscope induces

A

transmission electron microscopy

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16
Q

Transmission electron microscope (TEM)

A

operates under a similar principle to light microscopy except a beam of electrons is used instead of light. 2D image.

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17
Q

Scanning electron microscope (SEM)

A

scatters electrons off the surface of the sample. 3D image.

18
Q

Cells will have (3)

A
  1. Nucleus (or nucleoid)
  2. Cytoplasm
  3. Plasma membrane
19
Q

Nucleoid

A

contains most of the cell’s genetic material
NOT surrounded by a membrane

20
Q

Nucleus

A

membrane enclosed
contains cell’s genetic material

21
Q

Prokaryotes

A
  • No membrane bound
    organelles
  • Smaller
  • Nucleoid
  • Single circular
    chromosome
  • Cytoplasm bound by
    plasma membrane
22
Q

Eukaryotes

A
  • Membrane bound
    organelles
  • Larger
  • Nucleus
  • Multiple linear
    chromosomes
  • Plasma membrane bound
    by plasma membrane
    and nuclear membrane
23
Q

2 membranes in nuclear envelope

A

inner nuclear membrane
outer nuclear membrane

24
Q

Nucleolus (in the nucleus– organelle)

A

large structure in the
nucleus where ribosomoal RNA
is transcribed and ribosomal
subunits are assembled

25
Q

Why does the nucleus have pores?

A

lets things in and out

26
Q

Mitochondria (organelle)

A

have their own DNA, reproduce by division

inner and outer membrane

generates ATP: ATP is “loose” once expelled from mitochondria
–> for ETC and oxidative phosphorylation

27
Q

Mitochondria and chloroplast origins

A

evolved from engulfed bacteria

28
Q

Endoplasmic reticulum (organelle)

A

major site of protein, membrane lipid and oligosaccharide synthesis

ribosomes attached to the ER translate RNA to proteins

29
Q

golgi apparatus (organelle)

A

stacks of flattened membrane-enclosed sacs
modifies and packages molecules made in ER to be secreted/sent to another compartment

exchange of material by transport vesicles!

30
Q

lysosome (organelle)

A

v acidic
contain hydrolytic enzymes that are activated by proteolytic cleavage in an acidic envmnt

recycles things by breaking down macromolecules–> amino acids, sugars, nucleotides

proteins are broken down in acid

31
Q

lysosomal membranes contain transport proteins that…

A

carry products of macromolecule digestion to the cytosol for reuse or excretion

32
Q

Peroxisomes (organelle)

A

membrane enclosed vesicles

carry out oxidation rxns that lead to the production of H2O2 (hydrogen peroxide)

H2O2 is used to inactivate toxic molecules

33
Q

difference between cytosol and cytoplasm

A

cytosol= aq part of cytoplasm

cytoplasm includes aq portion, the suspended particles and the organelles!!!

34
Q

cytoskeleton (organelle)

A

network of protein filaments in the cytoplasm that are involved in strength organization, mvmnt, shape and cell division

35
Q

components of the cytoskeleton

A

actin filaments (for example; in muscle cells)

microtubules (ex; seen in chromosone separation)

intermediate filaments

36
Q

major components of cell membrane (3)

A

lipids
proteins
carbohydrates

37
Q

membrane functions (4)

A
  1. integrity of cells/organelles
  2. highly selective permeability barrier
  3. controls flow of info between organelles and surrounding envmnt
  4. site of energy transformation
    -mitochondrial membrane performs oxidative phosphorylation
38
Q

homologous genes

A

genes from diff organisms w v similar sequences

39
Q

the bulk of our DNA does not

A

code for proteins

40
Q
A