lecture 16 Flashcards
can dsRNAs be synthesized in the lab?
yes, you just need the sequence of the target mRNA
what is eRNAi
embryonic RNAi
what is mRNAi
maternal RNA
what are the main methods of reverse genetics?
TALEN, CRISPR, and Zinc finger nuccleases
what causes mutation by double stranded breaks?
non-homologous end joining (NHEJ)
zinc-finger nucleases
artificial restriction enzymes made by the fusion of a zinc-finger transcription factor domain and a DNA- cleavage domain
is a DNA- cleavage domain specific or non-specific?
non-specific
what is the ONLY way ZFNs can be used?
in pairs
TALENS
transcription activator-like effector nuclease
how are TALENS made?
the fusion of the DNA binding domain of a bacterial transcription factor (TAL) to a DNA cleavage domain
is the DNA cleavage domain sequence specific ?
no, but researchers can engineer it to be
how do TALs work?
they recognize DNA through 34 AA repeat sequence, but the 12th and 13th position are hypervariable, meaning there is no code
how many TALENs do you need for a double stranded break?
2
what does CRISPR stand for?
Clustered Regularly Interspaced Short Palindromic Repeats
what is CRISPR?
an adaptive immunity system in bacteria