Lecture 14-16 Flashcards
Extinction def
Death of the last individual of the species
Likely lost forever –> if it comes back, it will likely not be the same species
Diffiucult to prove a negative in sciences
How do you demonstrate extinction?
Successive searches throughout the native range
- no individuals found where previously there had been individuals –> classified as extinct
Different agencies can disagree as to what constitutes a thorough search
What does extinct in the wild mean?
A species that is extinct in its habitat, but still found in captivity
Death of the last individual of the spcies in the wild. Individuals persists in captivity
What are some problems with the reintroduction of a species that was extinct in the wild?
Differences between environments
When they are gone, other things filled the niche –> hard to reintegrate
Pop. size is small which causues inbreeding –> low genetic diversity leads to alleles being shared
Most species cannot be kepy indefinitely in captivity
- often do not breed well
- prone to disease
- very low genetic diversity
Last stage before full extinction
What does funtionally extinct mean?
A species which still has members present in the environment, however pop. is greatly reduced compared to the ancestral pop.
Have decreased below their minimum viable pop.
Have obvious factors in the envr. preventing pop. from recovering
Are no longer performing their role in the ecosystem
When does a species fall below the minimum viable pop.? What are the issues?
Genetic diversity too low for healthy breeding over the long term
Greater likelihood that “chance events” could wipe out your entire pop. such as severe drought, hurricane, etc.
Extirpation definition
Local extinction of a population from a geographical range
Other populations of the species survive elsewhere
Extirpation (N=0) is about population dynamics
What is a population?
A group of individuals of the same species inhabiting the same area (implicit – breeding; genetic mixing)
What is population dynamics?
Changes in population size (N) and composition over time
What processes increase population size?
breeding, immigration, supplementation
What processes decrease population size?
Death, emigration, harvesting, carrying capacity truncation
What does a positive r represent? What does a negative r represent?
Positive: population will grow
Negative: population will decline
What do population numbers at a certain time t (Nt) depend on in the equation?
Numbers in the pop. in previous time N(t-1)
The intrinsic rate of pop. increase r
- add variations in rates of births and deaths
Introduce stochasticity (epsilon) –> fluctuation
- sampled from a normal distribution
Carrying capacity K
- the number of individuals an envr can support before resources run out or the envr begins to degrade
- add variations in resources
What is the equation for Nt?
Nt = N(t-1) * (1+(r+epsilon1,t) * (1-Nt-1/(K+epsilon2,t)))
What are other factors that impact population numbers?
Humans
- change of environmental conditions (changes in K)
- invasive species (competition)
- nonlinearity in pop. growth
- selective harvesting
- pollution
- land-use change
Extreme events
- spread and impact of disease
- natural catastrophes
How does pollution impact pop. numbers?
Releases chemicals into the environment
Acid rain
How does land-use change impact pop. numbers?
Changing environments
Loss of habitats
What is a stochastic simulation of pop. numbers?
Based on predictable pop. dynamics, but allowing for change variations (probability) from individual to individual and year to year, and allowing for the numbers of individuals in the population in the preceding year (history)
What are stochastic simulation models and what do they allow?
They are computer programs that quantitatively describe all processes known to influence pop. size, including both the intrinsic characteristics of the species and the extrinsic influences of biotic and abiotic conditions in the local envr
Allow random variability in the parameters of the model within bounds set by our knowledge of the mean and variance in each process and each factor in the envr
Run the model many times, each time reassigning new random values to each parameter, and use the frequency across many simulations to estimate the probability of extinction in the pop. or species
What are allee effects?
a density-dependent phenomenon in which population growth or individual components of fitness increase as population density increases
a correlation between population size or density and the mean individual fitness
What are some examples of allee effects?
Mate limitations
Loss of genetic diversity
What are some possible side effects of low genetic diversity?
Greater susceptibility to disease
Greater change of deleterious alleles (detrimental to survival) becoming prominent in the pop.
How does bottleneck events impact pop. size and genetic diversity?
Severely reduces it
All the genetic variation from these individuals is lost from the species forever
What are metapopulations?
Networks of spatially isolated populations connected by some exchange of individuals (or pollen, gametes) over time
How does immigration impact pop. numbers?
Increases –> allows for gene flow between isolated populations
Moves genetic history around and increases variability
What is gene flow?
The movement of alleles between two geographically separated populations
A single individual moving between populations can cause gene flow
What do population viability analyses (PVA) include?
Uses stochastic simulation models to integrate knowledge about:
1) demographic fluctuations due to random variations in demographic parameters
2) environmental fluctuations due to variation in predation, competition, disease, food supply, catastrophic events, etc.
3) loss of genetic variability, inbreeding depression, genetic drift (random change in allele frequency) in small populations; may be offset by migrations from other populations and mutations
What is the role of chance in pop. dynamics?
Chance plays in important role in the probability of natural catastrophes and pop. demography
Chance also plays an important role in metapopulation dynamics
- degree of movement among adjacent populations and environmental conditions that influence emigration/immigration
Chance plays a role in effects of small population size
- detrimental influence on interactions among individuals
–> inbreeding depression, genetic bottlenecks
What are the arguments for and against the overkill hypothesis?
For:
- extinctions fall clearly at 11,000 BP
- kill sites/evidence mammoth were hunted
- disproportionate effect on large mammals
Against:
- extinctions of species not hunted by humans
- no extinctions of some vulnerable species
- extinctions also in Alaska where no humans
- few kill sites, incomplete fossil record
What is the overkill hypothesis?
Human hunting was proposed to have caused the extinction of the megafauna that roamed North America during the Pleistocene
What is an alternate hypothesis to the overkill hypothesis? What are the arguments for and against?
Climate caused the extinctions.
For:
- last glaciation coincides with extinctions
- changing vegetation, food source, competition
- may explain impact on species not hunted
Against:
- no extinctions through dozens of past glacial advances and retreats
- extinctions may be too rapid
FINISH LECTURE 14!
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Is extinction a normal part of evolution/
Yes, of all species which have ever existed, 99.9% are now extinct
It is the most likely the fate of a species
There is a normal background rate of extinction, punctuated by mass extinctions
- rate of extinction is substantially higher than what the background rate of extinction usually is
How is background rate of extinction measured?
Calculated rate of extinction using the fossil record to first count how many distinct species existed in a given time and place, and then to identify which ones went extinct
This has limitations
What are limitations on estimating background rate of extinction?
Fossil record does not accurately represent past species diversity
Fossil formation is not possible (or likely) in all environments (habitats)
Soft-bodied organisms do not preserve well
- almost no fossil record for jellyfish and worms
Fossils of land animals are scarcer than those of plants
Not always possible to accurately classify species in the fossil record
- particularly from small fragments
Chronospecies
Pseudoextinction
Extinction rates generally measured at the taxonomic level of family, not species or genus. Therefore it is hard to tell distinctions between species in the fossil record.
What is the environment with the most conducive environment for fossil formation?
Shallow seas
Other habitats are less represented in the fossil record
What conditions are required for a fossil to form?
Fossils can form through freezing, drying, or encasement (in tar or resin) but these types of fossils are very rare
Most fossils are formed when a plant or animals dies in a watery envr and is buried in mud and silt
- after an organism’s soft tissues decay in sediment, the hard parts (bones) are left behind. Over time sediment builds over the top and hardens into rock.
What is a chronospecies?
A single species, changing morphologically, genetically, or ecologically over long time scale
- still the same species but might look different in the fossil record
Changes occur to such an extent that the original species, and its descendants, are identified as separate species
What is pseudoextinction?
When a species is presumed to have gone extinct, but has instead become a different species (or sub-species)
Incomplete fossil record can lead us to believe a species has gone extinct, when it simply evolved into a different species over time
What are some biotic mechanisms of extinction?
A species can be competitively excluded by a closely related species
The organisms that the species exploits (what is feeds on) may come up with an unbeatable defense
A new predator may expand its territory
A species can be wiped out by a disease
What are some abiotic mechanisms of extinction?
The niche or habitat the species occupied can no longer support the species
Temperature or climate fluctuations
Extreme sea level changes
Impact events (meteorites)
Volcanism
What happens when extinction rates rise above the expected background rate of extinction?
Mass extinctions