Lecture 11- Programmed cell death Flashcards
What is programmed cell death essential in?
- embryonic development
- metamorphosis
- immune system function
- cleanly removing excess, old, damaged, abnormal, or malfunctioning cells
what does phosphorylated p53 bind to?
phosphorylated p53 is active and binds to the regulatory region of the p21gene. p21 mRNA is made and then the p21 protein (CDK inhibitor protein).
causes apoptosis.
apoptosis
highly regulated, reproducible form of programmed cell death
necrosis
accidental, uncontrolled cell death and can cause inflammation
what does apoptosis do?
it carefully dismantles the cell and signals for its removal by engulment
what do changes in apoptosis include?
- cell shape changes and shrinkage
- cytoskeleton disassembly
- decreased cell adhesion
- DNA fragmentation
- surface lipid changes
- cell removal by engulfment
what protease triggers apoptosis?
caspase
how are caspases synthesized?
as inactivae procaspases
how are active caspase dimers formed ?
signals initiate caspase cleavage to form active caspase dimers
caspase cascade
some caspases can cleave and activate other caspases to create and amplified caspase cascade
how do caspases trigger apoptosis?
they cleave specific target proteins
which caspases are initiator caspases
caspase 8 and caspase 9
initiator caspases
cleaved and activated in response to apoptotic signals
which caspases are executioner caspases
caspase 3, 6 and 7
executioner caspases
cleaved and activated by initiator caspases creating a caspase cascade
what do executioner caspases do?
the cleave and target proteins in the cell to initiate apoptosis
what does the caspase target to get cell shape change and shrinkage
cell-cell adhesion proteins
what does the caspase target to get DNA fragmentation
breakdown of nuclear lamins
activation of DNA endonucleases
what does the caspase target to get cytoskeleton disassembly
alter actin regulatng proteins
what does the caspase target to get surface lipid changes
lipid distibution proteins
1. flippase inactivation
2. scramblase activation
how do executioner caspases indirectly cause DNA breakdown?
an inactive CAD is bound to the inhibitor of CAD
the executioner3 cascade cleaves inhibitor of CAD, activating CAD
active CAD causes cleavage of DNA between nucleosomes
what do healthy cells have
active flippase, inactive scramblase
what happens to flippase and scramblase in apoptotic cells
- caspase cleaves flippase to inactivate it
- caspase cleaves scramblase activating it (more lipids to outer layer)
what pathways can apoptosis be triggered by?
extrinsic and intrinsic pathways
extrinsic pathway
depends on cell surface receptors binding to an extracellular signal molecule to activate executionar caspases
intrinsic pathway
depends on intracellular receptors - depends on cytochrome C
components of extrinsic apoptosis pathway
caspase 8, FADD adaptor protein, Fas death receptor, killer lymphocytes
domain in caspase 8
death effector domain
domains in FADD adaptor protein
death effector domain and death domain
domain in Fas death receptor
death domain
what do killer lymphocytes express
cell surface Fas ligands
DISC - death inducing signalling complex
killer lymphocyte with Fas ligand binds to the Fas receptor
the death domain in Fas receptor is activated
the death domain in Fas recptor binds and activates the death domain in FADD adaptor protein
the death effector protein in FADD is active and it binds to the death effector protein in caspase 8 activating it
what can healthy cells express to evade extrinsic apoptosis pathway signals
decoy receptors
what do decoy receptors lack
intracellular death domains
how do decoy receptors help healthy cells to stay alive
When Fas ligand binds to decoy receptor, no DISC assembles, so apoptosis is not triggered
what does intrinsic apoptosis pathway depend on
Apaf1 and cytochrome C
how does intrinsic apoptosis work
cytochrome C binds to Apaf
this exposes the CARD domain and the oligomerization domain of Apaf1.
what domains on Apaf1 are exposed when cytochrome C binds to it
CARD domain and oligomerization domain
how does cytochrome C release activate the intrinsic apoptosis pathway ?
- cytochrome C is released from the intermembrane space
- it binds to Apaf 1, CARD domain and oligomerization domain are exposed
- oligomerization of Apaf1 takes place (apoptosome without caspase)
- there is recruitment of caspase 9 monomers to apoptosome and caspase 9 activation by dimerization
- cleavage and activation of executioner caspases by activated caspase 9 dimers
what releases cytochrome C
mitochondrial outer membrane permeabilization
cyctochrome C cannot usually cross outer membrane
how do channels in the outer mitochondrial membrane form
apoptotic stimuli trigger Bak and Bax proteins to form a channel in the outer mitochondrial membrane
what do bak and bax channels promote
mitochondrial outer membrane permeabilization
what bcl2 family members are similar to bac and bax
bcl2 and bcIxL
Bcl2 and BclxL action
they bind bac and bax preventing them from forming channels
they block MOMP so they are considered anti-apoptotic proteins
BcI1 family proteins that can promote MOMP
Bad
explain the action of Bad
Bad binds to BcI2 and BcIxL
Bad promotes MOMP and is a pro-apoptotic protein
IAPs
they are inhibitors of apoptosis
IAP that can block both initiator and executioner caspases
XIAP
anti IAP proteins
usually in the mitochondrial intermembrane apce
they are released with cytochrome C when MOMP is triggered
they inhibit XIAP, allowing the caspase cascade to trigger apoptosis
examples of anti IAP proteins
Omi and Smac
Survival factors
Many cells will undergo apoptosis if they are not supplied with survival factors
cells that leave their correct environment are no longer protected by survival factors
what limited availibility of survival factors do
regulate cell numbers
cascade initiated by survival factors to activate anti apoptotic proteins
BcI2 transcription increases
BcI2 and BcIxL block Bak/Bax from forming a channel in the mitochondrial outer membrane
MOMP I blocked, apoptosis does not occur
cascade initiated by survival factors to inactivate pro-apoptotic proteins
Akt kinas is activated and phosphorylated bad
BAD is inactive and cant bind to BcI2 and BcIxL
they bind Bax and Bax, MOMP not occurring, apoptosis does not proceed
inappropraite cell death leading to disease
- cancer cells display properties that should makr them for apoptosis (changes to cell adhesion, DNA damage, survival outside their usually environment)
how do cancer cells grow and proliferate
must escape apoptosis