Lab Investigation of Liver and GI Tract Disease Flashcards

1
Q

Describe the structure of the liver.

A

The liver is the largest organ in the body and is located in the upper right quadrant of the abdomen. It weighs approximately 22 g/kg of body weight (1.5 kg in an average 70 kg male).

The liver has a dual blood supply – 2/3 comes from the gut via the portal vein and 1/3 from the hepatic artery (rich in oxygen). Blood leaves the liver through the hepatic veins.

The liver has two lobes which are each composed of multiple liver lobules. These consist of plates of hepatocytes radiating from a central vein, which carries blood from the liver.

Each lobule can be further divided into liver acini, the smallest functional unit of the liver.

Substances for excretion from the liver are secreted from hepatocytes into canaliculi.

The bile canaliculi merge and form bile ductules, which subsequently merge to become a bile duct and eventually become the common hepatic duct.

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2
Q

List the major functions of the liver.

A
  • Carbohydrate metabolism
  • Fat metabolism
  • Protein metabolism
  • Synthesis of plasma proteins
  • Hormone metabolism
  • Metabolism and excretion of drugs and foreign compounds
  • Storage – glycogen, vitamin A and B12, plus iron and copper
  • Metabolism and excretion of bilirubin
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3
Q

What are some common disease processes affecting the liver?

A

HEPATITIS:
- Damage to hepatocytes

CIRRHOSIS:

  • Increased fibrosis
  • Liver shrinkage
  • Decreased hepatocellular function
  • Obstruction of bile flow

TUMOURS:
- Frequently secondary: colon, stomach, bronchus

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4
Q

How would you biochemically assess liver function?

A

You could perform biochemical tests (LFTs):
- Insensitive indicators of liver function,
sensitive indicators of liver damage
- Look for pattern of results - a single result rarely provides a diagnosis on its own

Interpretation must be performed within the context of the patient’s risk factors, symptoms, medications, current condition/illness and physical findings.

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5
Q

What are liver function tests (LFTs) used for?

A

LFTS are NOT diagnostic, but can be used for:

  • Screening for the presence of liver disease
  • Assessing prognosis
  • Measuring the efficacy of treatments for liver disease
  • Differential diagnosis: predominantly hepatic or cholestatic
  • Monitoring disease progression
  • Assessing severity, especially in patients with cirrhosis
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6
Q

What does a LFT include?

A

The standard LFT profile at St George’s Hospital includes:

  • Total Bilirubin
  • Alanine aminotransferase (ALT)
  • Alkaline phosphatase (ALP)
  • Albumin
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7
Q

Describe jaundice.

A

Jaundice describes the yellow discolouration of tissue due to bilirubin deposition. An increase in total bilirubin is termed hyperbilirubinaemia.

Clinical jaundice may not be evident until the serum/plasma bilirubin concentration is 2x the upper reference of normal, >50 μmol/L.

Causes include:

  • HAEMOLYSIS (increased bilirubin production) – acquired autoimmune haemolytic jaundice, drug induced and spherocytosis
  • HEPATOCELLULAR DAMAGE (impaired bilirubin metabolism) – toxins or infections
  • CHOLESTASIS (decreased bilirubin excretion) – Cirrhosis, tumour or gallstones
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8
Q

Describe the lab investigations of bilirubin in plasma/blood.

A

Bilirubin is measured in serum/plasma samples as:

  • TOTAL BILIRUBIN - Unconjugated and conjugated bilirubin (& delta bilirubin)
  • DIRECT – Conjugated bilirubin (& delta bilirubin)
  • INDIRECT – Unconjugated bilirubin (calculated)

Delta bilirubin is formed by the irreversible covalent addition of bilirubin to albumin that occurs in the presence of prolonged conjugated hyperbilirubinaemia.

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9
Q

Describe the lab investigations of bilirubin in urine.

A

Bilirubin can be measured in urine using a simple dipstick. It uses a similar diazo method.

As unconjugated bilirubin is protein bound it is not normally found in urine. The presence of bilirubin in the urine therefore indicates the presence of conjugated hyperbilirubinaemia.

Excess conjugated bilirubin will darken the urine. This is seen in cases of hepatitis or impaired flow of bile in patients with biliary obstruction.

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10
Q

What is the significance of urobilinogen in the urine?

A

If urobilinogen is present in the urine it demonstrates that bilirubin is reaching the gut. It can be detected by a urine dipstick.

Excess urobilinogen in the urine may indicate liver disease such as viral hepatitis and cirrhosis or haemolytic conditions associated with increased red cell destruction.

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11
Q

Describe Alanine Aminotransferase (ALT).

A

ALT is a intracellular cytoplasmic enzyme that catalyses the transfer of an amino group from alanine to α-ketoglutarate. It’s a key enzyme in gluconeogenesis, with a ~47 hour half-life in plasma.

ALT is the most specific marker for liver injury although it is also expressed by the kidneys and cardiac and skeletal muscle.

ALT is used to identify liver damage arising from hepatocyte inflammation or necrosis.

Values >20x the upper limit of normal (ULN) may occur with severe liver damage. Small increases (<5x ULN) may occur in cholestasis due to secondary damage to hepatocytes.

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12
Q

Describe Aspartate Aminotransferase (AST).

A

AST is a intracellular cytoplasmic and mitochondrial enzyme that catalyses the transfer of an amino group from aspartate to α-ketoglutarate. It has a half-life of ~17 hours in plasma.

AST is less liver specific than ALT and there is little use in measuring both enzymes.

The only indication for measuring ALT and AST is to determine the AST:ALT ratio:
<0.8 – suggestive of non-alcoholic fatty liver disease (NAFLD);
>1.5 – alcoholic liver disease (ALD).

AST is assayed using the same method as ALT, replacing alanine with aspartate and producing oxaloacetate rather than pyruvate.

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13
Q

Describe Alkaline Phosphatase (ALP).

A

ALP is a membrane bound glycoprotein enzyme that removes phosphate groups from proteins and nucleic acids.

It has maximum catalytic activity at pH 9-10.5.

ALP isoenzymes are found in a number of tissues. The greatest concentrations are found in bone, liver, (biliary canaliculi), intestine and placenta.

ALP is of major value in the diagnosis of cholestatic disease along with GGT as cholestasis stimulates enhanced synthesis of liver ALP.

ALP is elevated in children and correlates well with the rate of bone growth (child-specific reference ranges). Also increased during pregnancy due to an increase in placental ALP.

The source of an elevated ALP can be determined by gel electrophoresis. It is possible to separate ALP isoenzymes into liver, bone, and intestinal fractions.

The placental isoenzyme of ALP can be identified as it is heat stable at 65°C for 10 minutes, unlike the other isoenzymes.

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14
Q

Describe Gamma Glutamyl Transferase (GGT).

A

GGT is a membrane bound enzyme that transfers the gamma glutamyl group from peptides such as glutathione to other peptides and to L-amino acids.

A relatively specific marker for liver injury found on the canalicular membrane of hepatocytes, but also found on the cell membranes of other tissues.

Plasma GGT is elevated in response to consumption of alcohol and other drugs (eg. phenytoin, barbiturates)

GGT does not generally provide more information than the routine LFT results but it can be useful in determining the origin of an unexplained raised ALP:

Interpretation of ALP and GGT results:

  • ↑ ALP and ↑ GGT – suggestive of hepatic cause (cholestasis)
  • ↑ ALP and N GGT – suggestive of bone source of ALP
  • N ALP and ↑ GGT – suggestive of excess alcohol intake
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15
Q

Describe Albumin.

A

Albumin has a half-life of around 20 days and the liver synthesises around 12 g every day.

Albumin is an essential plasma protein and has many roles including maintaining the plasma oncotic pressure and binding several hormones, drugs, anions and fatty acids.

Albumin is only a crude indicator of the synthetic capacity of the liver due to its long half-life and because plasma albumin levels can decrease due to renal or GI losses, and also decrease during the acute phase response.

Use of dye binding assay for albumin assay at St George’s Hospital.
At a pH of 5.2-6.8, bromocresol purple binds with albumin, causing an change in absorbance at 600 nm.

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16
Q

Give a brief overview of the GI tract.

A
  • The GI tract is a 7-10 m continuous tube that runs from the mouth to anus.
  • Partitioned into many sections with distinct structure, anatomy and function.
  • Associated organs include the liver, gallbladder and pancreas.
  • The GI tract is encased in layers of voluntary and involuntary muscle (contraction in waves).
  • Has a large arterial system linking the different sections to the circulation (30% of C.O.).
17
Q

Describe gastric ulcers.

A

Gastric (or peptic) ulcers are caused by a break in the protective mucosal lining of the stomach, which allows acid to damage the underlying epithelial cells.

Signs and symptoms of gastric ulcers include:

  • pain in the abdomen that may come and go (may be eased with antacid)
  • waking up with a feeling of pain in the abdomen
  • bloating, retching and feeling sick
  • feeling particularly ‘full’ after a normal size meal

Causes of gastric ulcers are infection with helicobacter pylori (80% of cases) or the use of NSAIDs – non-steroidal anti-inflammatory drugs (20% of cases) e.g. aspirin and ibuprofen.

18
Q

What is H.Pylori and how would you detect it?

A

H. pylori is a helix-shaped gram-negative bacteria, diameter of 0.5 μm and length of 3 μm. Australian scientists Barry Marshall and Robin Warren demonstrated that H. pylori is the cause of most gastric and duodenal ulcers (awarded Nobel prize in 2005).

The urea breath test is rapid and non-invasive procedure used to identify infections by H. pylori.

Patient drinks a solution containing urea labelled with an uncommon isotope (radioactive carbon-14 or non-radioactive carbon-13).

The detection of isotope-labelled carbon dioxide in exhaled breath indicates that the urea was split and that that urease, and therefore H. pylori, is present in the stomach.

19
Q

Describe Vitamin B12 absorption.

A

Vitamin B12 cannot be produced by the human body and so must be obtained from the diet.

Vitamin B12 (cobalamin) is a water soluble vitamin that has an essential role in the nervous system and the formation of red blood cells as a co-factor for DNA synthesis.

When dietary B12 enters the stomach it is bound by intrinsic factor (IF), a 45 kDa glycoprotein by the parietal cells of the stomach

The B12-IF complex enters the intestine where it binds to receptors on the musocal cells of the ileum and is absorbed into the blood stream.

20
Q

Describe B12 deficiency.

A

The liver can store 3-5 years worth of vitamin B12, meaning that it can take a long time for vitamin B12 deficiency to present itself.

Signs and symptoms of vitamin B12 deficiency include:

  • macrocytic anaemia (increased MCV, decreased haemoglobin)
  • weakness and tiredness
  • pale skin
  • glossitis – inflammation of the tongue
  • nerve problems such as numbness or tingling (severe deficiency)
21
Q

Describe Pernicious Anaemia.

A

A severe deficiency of vitamin B12 is usually caused by pernicious anaemia, an autoimmune attack on the gastric mucosa.
Pernicious anaemia leads to the atrophy of the stomach wall and the secretion of IF is absent or severely depleted.

Alternatively, patients produce antibodies to IF, blocking the antibody binding to B12 or blocking the IF-B12 complex from being absorbed in the ileum.

If anti-IF antibody is present pernicious anaemia is very likely but its absence does not rule out the diagnosis of pernicious anaemia.

22
Q

Describe Coeliac Disease.

A

Coeliac disease is an autoimmune disorder, primarily affecting the small intestine.

The disease results from immunological hypersensitivity to ingested to gliadin (gluten protein), found in wheat and other grains such as barley and rye.

Approximately 1 in every 100 people in the UK has the disease, which is prevalent in Europeans and but rare in Chinese people.

Classic symptoms of coeliac disease include GI problems such as diarrhoea, abdominal distention, malabsorption and loss of appetite.

Upon exposure to gluten in the small intestine there is an inflammatory reaction leading to the shortening of the villi lining and villous atrophy.

23
Q

How would you test for Coeliac Disease?

A

A duodenal biopsy is the gold standard diagnosis of coeliac disease. The results of the below tests are not diagnostic of coeliac disease, but are ‘indicative of’, and should be used in conjunction with clinical information before a diagnosis of coeliac disease is made.

TISSUE TRANSGLUTAMINASE ANTIBODIES:

  • Tissue transglutaminase (TTG) is a enzyme that deaminates glutamine residues to glutamic acid on the gliadin fragment. The enzyme can be a target autoantigen in the immune response seen in coeliac disease.
  • IgA antibodies to TTG are found in approximately 96% of patients with coeliac disease. Also test for IgG antibodies to TTG as around 1 in 250 people are deficient in IgA.

ENDOMYSIAL ANTIBODIES:

  • The endomysium is the supporting structure that surrounds the middle third of the oesophagus. Endomysial antibodies are indicative of coeliac disease.
  • The endomysial antibody test is not as sensitive as the TTG antibody test and around 5-10% of people with coeliac disease do not have a positive endomysial antibody result.
  • The presence of endomysial antibodies is subjective and more labour intensive than the TTG assays and is only used to further investigate positive TTG antibody results.
24
Q

Describe IBS and IBD.

A

Signs and symptoms:

  • abdominal pain or discomfort
  • diarrhoea or constipation.

Many people with IBS have unnecessary expensive and invasive hospital investigations for IBD such as a colonoscopy.

We need biochemical markers for differential diagnosis.

IBD: ~200 per 100,000 people
IBS: 10-20% of the adult population

25
Q

List some differences between IBD (irritable bowel disease) and IBS (irritable bowel syndrome).

A

IBD:

  • is a condition characterised by inflammation of the intestinal system
  • have extra intestinal manifestations in addition to GI symptoms
  • treated with anti-inflammatory medications
  • patients may have to undergo surgery

IBS:

  • is not a true disease, but a functional disorder presenting with vague GI symptoms
  • features are only distributed in the area of intestines
  • not treated with anti-inflammatory medications
  • surgical intervention is not necessary
26
Q

Describe calprotectin.

A

Calprotectin is a small calcium-binding protein that contributes to ~60% of the cytosolic protein content in neutrophils.
It is a zinc and calcium binding protein.

In the presence of active intestinal inflammation, neutrophils migrate to the intestinal mucosa from the circulation.

Any disturbance in the mucosa architecture due to the inflammatory process results in leakage of neutrophils and hence calprotectin is excreted in feces.

It is useful for differentiating IBS and IBD in a younger agre group (i.e. patients <40 years old).

27
Q

Describe the faecal immunochemical test (FIT).

A

It’s a ‘dipstick’ test for blood in the stool.
The amount of blood in the stool increases in diseases accompanied by haemorrhagic lesions in GI tract.
It’s also early detection of colon cancer.
it’s recommended in NICE guidance DG30.

There is guide referral for petients with suspected colorectal cancer who do not meet criteria for a suspected cancer pathway referral.

28
Q

Describe how to get FIT samples.

A

Haemoglobin is unstable in faeces.

There is the collection of stool sample straight into FIT tube by patient.
You’ll require patient information for collection.

There are erroneous test results due to improper specimen collection, failure to follow the recommended sample collection procedure, handling or storage, or an insufficient concentration of starting material.

29
Q

How do you measure FIT?

A

There is the quantitative measurement of Hb in faeces.

OC-Auto 3 latex reagent is an immunoassay test reagent and can be used with an automatic analyser.

At St Georges, FIT result <9.5 µg Hb/g faeces:
- these patients have a low risk of colorectal cancer. However, in patients with persisting symptoms of significant concern, specialist advice should be considered in line with local arrangements.

For FIT ≥10 µg Hb/g faeces:
- further investigations are required in line with local guidelines