L22- HIV Flashcards
HIV: family, subfamily, genus
Family- retroviridae
Subfamily- orthoretroviridae
Genus- lentivirus
list the important properties of the Lentivirus genus
- infects immune cells
- provirus permanently in infected cells (latent infections via reverse transcriptase)
- causes slow, progressive, chronic disease
-non-oncogenic viruses
HIV: group, genome make-up (include ORF), virus / core shape and structure
Group VI- (+)ssRNA, 2 copies
-9 open reading frames => ~15 proteins
- enveloped, spherical shape
- inverted cone or bullet shaped core with genome
(1) is the term for when HIV genome is integrated with host genome
viral mRNA codes for (2) in a (3) structure
1- provirus
2/3- non-structural (core) and structural (envelope, capsid) proteins each in a polyprotein form –> cleaved into proteins as final step of maturation
HIV main external Ags (include brief functions):
- (1) surface
- (2) transmembrane
- (3) precursor to (1)/(2)
1- gp120- binding to CD4 receptor
2- gp41- fusion and entry (possibly binding to co-receptor)
3- gp160 –> cleaved into gp120, gp41
list the 3 main genes found in all retroviruses and include what they code for generally
gag (group specific Ag): core, matrix, capsid proteins (p17, p24)
pol (polymerase)- reverse transcriptase, protease, integrase
env (envelope)- transmembrane glycoproteins (gp120, gp41)
Note- HIV has the most accessory genes of all retroviruses
-LTRs- long terminal repeats for gene expression once integrated
list the modes of HIV transmission (include infected body fluids)
- unprotected sex (vaginal, oral, anal)
- shared needles/syringes
- vertical transmission
Body fluids: blood, semen, vaginal fluids, pre-seminal fluid, rectal fluids, breast milk
-contact with mucosa, damaged tissue, or blood-to-blood
HIV:
- increases the risk of getting (1) infections, note before AIDS
- (2) may decrease heterosexual transmission of HIV
- (3) discuss survival of HIV in environment
1- other STIs
2- circumcision
3- doesn’t survive outside host long
HIV uses (1) to bind to (2), the main receptor. (3) is the initial co-receptor found on (4). (5) is the secondary co-receptor found on (6).
1- gp120
2- CD4 receptors
3/4- (m-tropism, early and less aggressive phase) CCR5: macrophages, dendritic cells, CD4 T cells (APCs)
5/6- (t-tropism, late and more aggressive phase) CXCR4: CD4 T cells
what is unique property of reverse transcriptase in terms of genome replication
- viral (+)ssRNA –> dsDNA
- *poor proofreader –> random errors
-uses host nucleotides
(1) will use viral dsDNA to create provirus
(2) will cleave polyprotein translated from viral mRNA to mature viral proteins; (3) is the key sign that a HIV virus has matured
1- integrase
2- protease
3- change of core shape –> bullet shaped (inverted cone shape)
(1) is the key receptor in the brain that HIV attaches to on (2) cells, resulting in formation of (3)
1- CCR3
2- microglial cells
3- brain nodules
initially HIV viruses enter the body and bind to (1) cells, leading to (2) progression before development of acute viremia
- macrophages: internalized –> goes to LNs
- dendritic cells: accumulates on surface –> goes to LNs –> CD4 T cells infected
what parameters lead to AIDS diagnosis
1) T cells count <200
2) AIDS defining opportunistic infections
describe the two methods HIV uses to avoid Ab detection + the method to shied HIV from the immune system in general
1) gp120 antigenic drift (random errors via reverse transcriptase)
2) syncytia formation –> direct cell-to-cell spread (as opposed to cell lysis)
-viral latency / provirus in T cells and APCs shield virus from immune system