L2. DNA replication In Prokaryotes Flashcards
What is Conservative DNA replication?
Conservative Replication- the parental double strand is entirely duplicated to create a new double strand
What is Semiconservative DNA replication?
Parental strands are separated and used as a template to synthesize a new strand
What is Dispersive DNA Replication?
Parental strands are cleaved into segments, replicated and the resulting DNA strands are a “patchwork” of original DNA and new DNA
What are the thought to be the 3 possible ways of DNA replication?
Conservative replication
Semiconservative replication-thought to make the most sense but had to be proven
Dispersive replication
What technique did researchers studying DNA replication rely on?
Centrifugation
How is centrifugation done?
Bacteria are harvested from the culture
- Bacteria in media are placed in a centrifuge tube and centrifuged in a fixed angle centrifuge to separate bacteria from media
- bacteria is heavier than the media and pellets(collects) at the bottom of the centrifuge tube
- Bacterial pellet is then collected (harvested) and lysed(opened up) to extract the genomic DNA
What is Sedimentation Equilibrium Centrifugation?
- A solution of 6M CsCl is placed in a centrifuge tube
- DNA sample is added(more than one molecule may be added)
- While the sample is being centrifuged, the CsCl forms a density gradient where the molecules are more concentrated near the bottom of the tube and less at the top of the tube
- The DNA settles in the tube where its density matches the density of the CsCl
After sedimentation equilibrium Centrifugation, as one descends the tube….
Increases the density of CsCl
Molecules at the top are lighter/less heavy molecules
What results from sedimentation equilibrium Centrifugation for 50-60 hrs?
After 50-60 hr at 100,000 x g results in the generation of a gradient of CsCl and banding of DNA
When did the Meselson-Stahl experiment occur?
1958
Give a brief overview of the Meselson -Stahl experiment
E. Coli was grown in a growth medium that had heavy isotope of nitrogen to incorporate in DNA duplication 15N
They then harvested the bacteria, isolated the DNA and used Sedimentation Equilibrium Centrifugation to determine the density of the DNA
Give in detail, the Meselson-Stahl experiment methodology
- E. Coli DNA becomes uniformly labeled with N-15 in nitrogenous bases
- used sedimentation equilibrium Centrifugation to determine the density of the DNA
- N-15 labeled E. Coli transferred to N-14 only medium and allowed to replicate once so all newly formed DNA would contain (generation 1)
- they then harvested the bacteria, isolated the DNA and used Sedimentation Equilibrium Centrifugation to determine the density of the DNA
They isolated a band of medium density
What was realized by isolating a band of medium density in the Meselson-Stahl experiment ?
- A hybrid of N-15 and N-14
- Not consistent with a Conservative Replication
- May be either a Semi-conservative or Dispersive
How could of Meselson and Stahl discover whether DNA replication was semi conservative or Dispersive?
If they grew the bacteria for another generation
Dispersive: you would continue to see one hybrid band containing equal amount of N-15 and N-14
Semi-conservative: you would see one hybrid band containing N-15 and N-14 and a new band of only. N-14 appear
Who and when discoveredSemi-conservative replication in eukaryotes?
J. Herbert Taylor, Phillip Woods and Walter Hughes in 1957
What cells were used for Taylor, Woods and Hughes Experiment?
From root tips of broad beans Vicia faba
How was DNA replication observed in Taylor, Hughes and woods Experiment?
DNA was labelled using radioactive 3H-thymidine
Autoradiography was used to follow the incorporation of radioactive isotope into replicating DNA
-Photographic X-ray film is placed onto sample, radioactivity exposes the film
DNA is monitored for two cell cycles and radioactive isotope is followed at metaphase
Give an overview of the methodology of of the Taylor, Phillips and Hughes experiment
- 3H-thymidine added to cellsjust before replication
- After replication, the DNA is isolated at metaphase and exposed to X-ray film
- film show evidence that both sister chromatids are labeled at metaphase
- cells monitored for a second cycle, replication of DNA occurs without adding more 3H-thymidine
- after replication, DNA isolated and exposed to X-ray film which shows that only one sister chromatid continues to be labelled with 3H-thymidine (occasional evidence of sister chromatid exchange )