Cancer Genetics 2 Flashcards

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1
Q

What is apoptosis?

A

Programmed cell death

  • when DNA damage is too severe to repair
  • Cells Balt progress through cell cycle
  • prevents cancer by removing cells with DNA damage (mutations)
  • Cells with DNA damage are NOTallowed to replicate (divide) and mutation is not passed on to next generation of somatic cells
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2
Q

What is the role of Bcl-2 in apoptosis?

A
  • Bcl-2 protein inhibits apoptosis and Bax protein is pro-apoptotic (triggers apoptosis )
  • When there is Bcl-2, Bax is inhibited and there is no apoptosis ; Bcl-2 inhibits Bax
  • When there is stress (DNA damage ), a Bcl-2 is inactivated. Bax activates caspases which triggers apoptosis
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3
Q

Describe Bcl-2 overexpression in cancer

A
  • increased production of Bcl-2 —> inhibition of apoptosis (reduced cell death)
  • As a result, cells with DNA damage continue to divide (hallmark of cancer)
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4
Q

What does tumor suppressor genes encode for?

A

Code for proteins that inhibit cell cycle and initiate apoptosis

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5
Q

Describe tumor suppressor gene mutations

A
  • these are loss of function mutations
  • Mutations in both copies of tumor supressor gene are necessary for cancer development: ‘two hit hypothesis’
  • Examples are RBC and p53
  • Arrest cell cycle at G1 phase and prevent cell progression to S phase (active at G1-S checkpoint)
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6
Q

Outline the two hit hypothesis

A

Two normal copies of Rb—> first hit (somatic mutation) —> Second hit in same somatic cell (somatic mutation). Both copies are lost —>

Complete loss of tumor supressor activity

  • no functional Rb protein
  • development of retinoblastoma
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7
Q

Explain retinoblastoma as tumor suppressor gene

A

Rb(retinoblastoma) functions at G1-S checkpoint

  • In G1 phase, RBC is bound to E2F
  • End of G1 phase, Rb is phosphorylated by CDKs
  • Phosphorylated Rb cannot bind to E2F (transcription factor).
  • E2F is free to stimulate transcription of S phase genes
  • Cells move from G1-S phase (cell division progresses)
  • In retinoblastoma, there is a mutant RBC protein that no longer binds to E2F, resulting in uncontrolled cell division
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8
Q

What is the role of Rb in cell cycle?

A
  1. Non phosphorylated Rb bound to E2F in G1 phase
  2. Cyclin CDKs phosphorylates Rb to release E2F and is at the end of the G1 phase
  3. E2F migrate to nucleus to induce transcription
  4. Protein factors for cell progression are produced
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9
Q

How does retinoblastoma cause uncontrolled cell division?

A

In retinoblastoma, there is a mutant RBC protein (or no Rb protein) that no longer binds to E2F , resulting in uncontrolled cell division

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10
Q

What are the TP53(p53) tumor suppressor gene?

A

TP53 (p53) tumor-suppressor gene
- Encodes transcription factor that represses or stimulates transcription of different genes

  • Controls cell cycle at G1/S checkpoint
  • Mutated in 50% of cancers
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11
Q

What is the function of p53?

A
  • Present in low concentration at end of G1 phase. (No DNA damage )
  • Scans genome for DNA damage
  • When NO DNA damage, allows cell to enter S phase
  • p53 is degraded
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12
Q

What is the function of p53 tumor-suppressor protein?

A

-When DNA damage is present, increased p53 levels

  • p53 causes
    • Arrest of cell cycle in G1 phase (activation of G1/S checkpoint)
    • Activates DNA repair proteins
    • If DNA damage is extensive, p53 activates apoptosis (cell death)
  • p53 is hence known as ‘guardian of the genome’ or ‘molecular policeman’
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13
Q

Describe p53 and cell cycle

A

p53 is active at G1-S checkpoint

- Cells lacking p53 are unable to undergo apoptosis
- Cells with DNA damage are unable to undergo apoptosis 
- Cells with DNA damage (mutations) divide and increase risk of cancer 
- Cellular stress events that increase p53 levels 
      - DNA damage
      - Double-stranded breaks in DNA 
      - Presence of DNA-repair intermediates due to UV light
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14
Q

Explain familial inherited cancer predisposition

A

Tumor suppressor mutations run in families and increase risk of cancer

  • Autosomal dominant transmission
  • Familial breast cancer (BRCA-1 or BRCA-2 mutation)
  • Familial retinoblastoma (RBC gene mutation)
  • Li Fraumeni syndrome (p53 mutation)
  • Familial Adenomatous Polyposis (APC gene mutation)
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15
Q

What happens when familial inherited cancer is passed down?

A

Mutation is passed from affected parent to child (germline): first hit

Mutation in second copy occurs during life (somatic mutation): second hit

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16
Q

Explain the two hit hypothesis: inherited retinoblastoma

A
  1. First hit inherited from affected parent(germline)- cells are heterozygous (they have a mutant copy and a wild type normal copy)
  2. Second hit in a somatic cell both copies are lost- Cancer cell shows ‘loss of heterozygousity’ (both copies are mutant)
  3. Complete loss of tumor suppressor activity
  4. No functional Rb protein
  5. Development of retinoblastoma
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17
Q

How does loss of heterozygosity contribute to cancer?

A
  • second wild type (normal) allele is mutated in tumor tissue
  • essential first-step in expression of inherited cancers
  • Additional mutations necessary for malignancy (familial adenomatous polyposis)
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18
Q

What mechanisms result in loss of heterozygosity (loss of second copy)?

A
  • Spontaneous deletion of the second copy
  • Point mutation resulting in an inactive protein
  • Epigenetic changes: methylation of gene resulting in reduced expression of gene (no tumor suppressor protein formed)
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19
Q

What is APC? (Recall colon cancer development)

A

APC (adenomatous polyposis coli) gene product: tumor suppressor that controls cell-cellcontact and growth inhibition

20
Q

What are DNA repair defects that can increase risk of cancer?

A
  • Xeroderma pigmentosum
  • Familial breast cancer
  • hereditary non-polyposis colon cancer (HNPCC)
21
Q

How does Xeroderma Pigmentosa lead to cancer?

A
  • DNA repair defect (defect in Nucleotide excision repair)

- Higher risk occurs mutations —> increased cancer risk

22
Q

How does familial breast cancer increase risk of cancer?

A
  • BRCA-1 or BRCA-2 mutations

- encode DNA repair proteins

23
Q

How does hereditary non-polypopsis colon cancer (HNPCC) lead to cancer?

A
  • Mutations in DNA mismatch repair genes

- Increased risk of mutations predisposing to cancer

24
Q

How can methylation/demethylation affect cancer risk?

A

Epigenetic changes are observed in cancer cells

  • Methylation of tumor suppressor genes and reduced synthesis of tumor suppressor proteins
  • Demethylation of oncogenes and increased synthesis of oncopriteins
25
Q

How does DNA methylation affect gene expression?

A
  • methylation of genes result in heterochromatin formation

- As a result there is reduced gene expression.

26
Q

Briefly describe cancer epigenetics

A

No change in base sequence of gene, but change in methylation patterns alter gene expression.

  • hypomethylation of oncogene leads to oncogene expression
  • hypermethylation of tumor suppressor gene leads to tumor suppressor gene repression
27
Q

What viruses cause cancer in animals and humans?

A
  • retroviruses (RNA viruses)

- DNA viruses

28
Q

How can retroviruses(RNA viruses) lead to cancer?

A
  1. Viral RNA injected into infected cell
  2. Reverse transcriptase synthesizes DNA from viral RNA
  3. Viral DNA incorporated into host DNA
  4. Viral DNA added close to oncogene and activates it
  5. Virus forms new RNA which are packed into viral envelope proteins
29
Q

Outline the pathway how RNA viruses lead to cancer

A

Cell becomes infected —> transfer of proto-oncogene from host cell to viral genome

Oncogene added into viral genome (Acute transforming retrovirus)

Activation of oncogene leads to development of cancer in infected cells

30
Q

What are DNA viruses?

A
  • DNA viruses infect dividing cells
  • Viral proteins synthesized by host cell
  • Viral proteins stimulate cell cycle
  • Loss of cell-cycle control progresses to cancer
31
Q

What are carcinogens ?

A

Damage DNA and causes mutations

  • May result in activation of proto-oncogenes or inactivation of tumor-suppressor genes
  • Chemicals, radiation, some viruses, and chronic infections
  • Can be natural or human-made
    • Our environment contains carcinogens
32
Q

What are the environmental carcinogens?

A
  • tobacco smoke
  • red meat and animal fat
  • alcohol
33
Q

What is tobacco smoke?

A
  • environmental carcinogen
  • contains mutagenic chemicals
  • Smokers increased risk of lung cancer (20-fold)
34
Q

How is red meat and animal fat an environmental carcinogen?

A

Associated with colon, prostate, and breast cancer

35
Q

How is alcohol an environmental carcinogen ?

A

Increases risk of liver cancer

36
Q

What are the natural carcinogens?

A
  • aflatoxin
  • nitrosamines
  • UV light sand ionizing radiation
37
Q

How is aflatoxin a natural carcinogen?

A
  • mold on bread and corn

- highly carcinogenic

38
Q

How are nitrosamines natural carcinogens?

A

Meat preservative; known to cause cancer

-Naturally occurring and synthetic pesticides and antibiotics

39
Q

How does UV light and radiation act as carcinogens ?

A
  • UV light and ionizing radiation (X rays and gamma rays) induce DNA damage
  • UV sunlight increases risk of skin cancer
  • Radon gas (ionizing radiation) increases lung cancer risk
40
Q

What are the therapies for cancer?

A

Two types of treatment:

  • radiation therapy (radiotherapy)
  • Chemotherapy
41
Q

How do chemotherapy and radiotherapy help with cancer ?

A
  • Both target rapidly dividing cells (cancer cells divide rapidly)
  • cancer cells have ineffective DNA repair mechanisms
  • Bone marrow, GI epithelium, skin and hair are also affected
  • Various cellular processes are targeted:
  • antihormone drugs: affect growth factor signal transduction pathway
  • Anti-microtubule drugs: inhibit mitotic phase of cell cycle
  • Alkylating agents : interact with DNA and inhibit replication and cell division
  • Antimetabolites: inhibit DNA replication
42
Q

When are cyclins and CDKs shnthes8xed and destroyed?

A

During the cell cycle

43
Q

Give examples of oncogenes and tumor-suppressor genes

A

Oncogene examples- Ras, Abl, Myc, cytoplasmic kinases, CDK

Tumor suppressor genes (antioncogenes)- P53, Rb

44
Q

Differentiate oncogenes and tumor suppressor genes (antioncogenes)

A

Oncogenes -gain of function
-contribute to development of cancer and increase rate of cell division

  • only one allele needs to be mutated or mis-expressed to contribute to cancer
  • confers a dominant cancer phenotype, 1st hit mutation

Tumor-suppressor (antioncogenes)
-mutation leads to the inability to inhibits cell division

  • cells unable to respond to check points or do apoptos8s, leads to more mutations and cancer
  • loss of function mutations
  • both copies must be lost to result in cancer
  • recessive at tumor level
  • 2nd hit mutation
45
Q

How do oncogenes lead to cancer?

A

Stimulate cell cycle and cell division

  • encode transcription factors that stimulate expression of other genes for signal transduct molecules that stimulate stimulate cell division
  • stimulate cell cycle regulators that move cell through cell cycle
46
Q

Hoe does tumor suppressor genes prevent cancer?

A
  • inhibit cell cycle and cell division
  • regulate cell cycle checkpoints and/or initiate process of apoptosis
  • when DNA is damaged, it activate apoptosis
47
Q

How do mutations in tumor suppressor genes(antioncogenes) lead to cancer?

A

Mutation in tumor suppressor genes result in uncontrolled cell division

-increased mutation rate from decreased DNA repair leads to increased inhibition of other tumor suppressors abd activation of oncogenes