L12. Breaking down & building cellular components Flashcards

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1
Q

what is needed to maintain order in cells

A
  • they need to break things down into building blocks
  • those are then used in anabolic pathways to build things for the cell
  • the energy is then dissipated as heat
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2
Q

where does energy come from

A
  • photosynthesis (plants, algae, and some bacteria)
  • cellular respiration (most living organisms)
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3
Q

explain photosynthesis

A
  • input of energy from sunlight
  • CO2 + H2O -> O2 + sugars
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4
Q

explain cellular respiration

A
  • sugars + O2 (both from photosynthetic organisms) -> H2O + CO2
  • it harvests energy by oxidation of molecules (controlled burning)
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5
Q

explain redox reactions

A
  • reduction: gain of electrons
  • oxidation: loss of electrons
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6
Q

redox reactions - what happens to to chemical bonds

A
  • reduction: increase in C-H bonds
  • oxidation: decrease in C-H bonds
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7
Q

what is catabolism

A
  • breakdown of foodstuffs into smaller molecules
  • generates a useful form of energy and building blocks
  • reaction is favorable
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8
Q

what is anabolism

A
  • uses energy harnessed by catabolism to drive the synthesis of the many molecules that form the cell
  • reaction is unfavorable
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9
Q

what is free energy (G)

A
  • it measures the energy of a molecule which could in principle be used to do useful work at constant temperature
  • chemical reactions only proceed only in the direction that leads to a loss of free energy
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10
Q

explain ΔG

A
  • it is equal to: (G in product) - (G in reactant)
  • when favorable: ΔG = negative
  • when unfavorable: ΔG = positive
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10
Q

explain how reactions are coupled

A

using a favorable reaction that has a more negative ΔG than the unfavorable ΔG

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10
Q

explain the standard free energy change (ΔG°)

A
  • it is a measurable and standardized unit
  • can be used for comparing different reactions
  • can use to see if a reaction can be coupled
  • all reactants are set to 1 mole/liter
  • ΔG can be calculated from ΔG° of concentration of products and reactants are known
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11
Q

ΔG° - why is it better than ΔG

A
  • ΔG depends on the concentration of the reactants at a given temperature (not useful for comparison)
  • ΔG° is better bc it is independent of concentrations and instead depends on intrinsic factors
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12
Q

how to measure enzymatic activity

A
  • use a device where an enzyme and substrate are injected into a mixing chamber
  • after meeting at the mixing tube, they enter another tube that zooms past a detector
  • this detector can then observe reactions when they are only a few milliseconds old
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13
Q

measuring enzyme activity - speed of motion

A
  • 1st need to have a series of increasing substate concentration prepared with a fixed amount of enzyme added
  • then determine the initial reaction rates (velocity)
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14
Q

measuring enzyme activity: speed of motion - why are initial velocities used

A

there is a saturation point where they enzyme cannot bind anymore

15
Q

measuring enzyme activity: speed of motion - explain the graph

A
  • square root graph
  • Km = Michaelis constant
  • Km = [substrate] at 1/2 V max
16
Q

measuring enzyme activity: speed of motion graph - how to make it linear

A
  • graphing reciprocals
  • x-intercept = -1/Km
  • y-intercept = 1/V max
17
Q

explain activated carriers

A
  • that are used to couple reactions
  • catabolic reactions make energy carriers and they will be broken down to be used for an anabolic reaction
18
Q

energy carriers - ATP

A
  • used to couple unfavorable reactions bc breaking it down (hydrolysis) is favorable
  • an unfavorable reaction uses ATP and it will be hydrolyzed
  • this then creates a high energy intermediate that will facilitate the rest of the unfavorable reaction
19
Q

explain condensation

A
  • unfavorable
  • expels water
20
Q

explain hydolysis

A
  • favorable
  • consumes water
21
Q

how are condensation and hydrolysis coupled

A

energy carriers are hydrolyzed to make energy for to use condensation for macromolecule synthesis

22
Q

activated carriers of electrons

A
  • FADH2
  • NADPH: oxidizes, passes along electrons, and donates electrons to create bonds
  • NADH: strips electrons
  • NADPH+: electron carrier and is the oxidized form of NADPH