Kapitel 15 Flashcards

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1
Q

Adjustment of sensitivity following repeated stimulation. The mechanism that allows a cell to react to small changes in stimuli even against a high background level of stimulation.

A

adaptation (desensitization)

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2
Q

General term for a protein that functions solely to link two or more different proteins together in an intracellular signaling pathway or protein complex. (Figure 15–11)

A

adaptor protein - adaptor

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3
Q

Membrane-bound enzyme that catalyzes the formation of cyclic AMP from ATP. An important component of some intracellular signaling pathways.

A

adenylyl cyclase (adenylate cyclase)

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4
Q

Serine/threonine protein kinase that acts in the PI-3-kinase/Akt intracellular signaling pathway involved especially in signaling cells to grow and survive. Also called protein kinase B (PKB).

A

Akt

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5
Q

Member of a family of proteins that contributes to GPCR desensitization by preventing the activated receptor from interacting with G proteins and serving as an adaptor to couple the receptor to clathrin-dependent endocytosis. (Figure 15–42)

A

arrestin

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6
Q

Plant hormone - commonly indole-3-acetic acid - with numerous roles in plant growth and development.

A

auxin

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7
Q

Multifunctional cytoplasmic protein involved in cadherin-mediated cell–cell adhesion - linking cadherins to the actin cytoskeleton. Can also act independently as a transcription regulatory protein. Has an important role in animal development as part of a Wnt signaling pathway.

A

beta-catenin (β-catenin)

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8
Q

Class of steroid signal molecules in plants that regulate the growth and differentiation of plants throughout their life cycle via binding to a cell-surface receptor kinase to initiate a signaling cascade.

A

brassinosteroids

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9
Q

Serine/threonine protein kinase that is activated by Ca2+/calmodulin. Indirectly mediates the effects of an increase in cytosolic Ca2+ by phosphorylating specific target proteins. (Figure 15–33)

A

Ca2+/calmodulin-dependent kinase (CaM-kinase)

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10
Q

Ubiquitous intracellular Ca2+-binding protein that undergoes a large conformation change when it binds Ca2+ - allowing it to regulate the activity of many target proteins. In its activated (Ca2+-bound) form - it is called Ca2+/calmodulin. (Figure 15–33)

A

calmodulin

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11
Q

Multifunctional Ca2+/calmodulin-dependent protein kinase that phosphorylates itself and various target proteins when activated. Found in most animal cells but is especially abundant at synapses in the brain - and is involved in some forms of synaptic plasticity in vertebrates. (Figure 15–34)

A

CaM-kinase II

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12
Q

Member of the Rho family of monomeric GTPases that regulate the actin and microtubule cytoskeletons - cell-cycle progression - gene transcription - and membrane transport.

A

Cdc42

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13
Q

Internal cyclical process that produces a particular change in a cell or organism with a period of around 24 hours - for example the sleep-wakefulness cycle in humans.

A

circadian clock

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14
Q

Photoreceptor cell in the vertebrate retina that is responsible for color vision in bright light.

A

cone photoreceptor (cone)

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15
Q

Form of intercellular signaling in which signal molecules remain bound to the surface of the signaling cell and influence only cells that contact it.

A

contact-dependent signaling

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16
Q

Transcription regulator that recognizes the cyclic AMP response element (CRE) in the regulatory region of genes activated by cAMP. On activation by PKA - phosphorylated CREB recruits a transcriptional coactivator (CREB-binding protein; CBP) to stimulate transcription of target genes.

A

CRE-binding (CREB) protein

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17
Q

Plant flavoprotein sensitive to blue light. Structurally related to blue-light-sensitive enzymes called photolyases (involved in the repair of ultraviolet-induced DNA damage) but do not have a role in DNA repair. Also found in animals - where they have an important role in circadian clocks.

A

cryptochrome

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18
Q

Latent transcription regulator that mediates the effects of Hedgehog.

A

Cubitus interruptus (Ci)

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19
Q

Nucleotide that is generated from ATP by adenylyl cyclase in response to various extracellular signals. It acts as a small intracellular signaling molecule - mainly by activating cAMP-dependent protein kinase (PKA). It is hydrolyzed to AMP by a phosphodiesterase. (Figure 15–25)

A

cyclic AMP (cAMP)

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20
Q

Specific enzyme that rapidly and continuously destroys cyclic AMP - forming 5′-AMP. (Figure 15–25).

A

cyclic AMP phosphodiesterase

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21
Q

Enzyme that phosphorylates target proteins in response to a rise in intracellular cyclic AMP. (Figure 15–26)

A

cyclic AMP-dependent protein kinase (protein kinase A - PKA)

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22
Q

Nucleotide that is generated from GTP by guanylyl cyclase in response to various extracellular signals.

A

cyclic GMP (cGMP)

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23
Q

Specific enzyme that rapidly hydrolyzes and degrades cyclic GMP.

A

cyclic GMP phosphodiesterase

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24
Q

Cell-surface receptor that binds a specific cytokine or hormone and acts through the JAK–STAT signaling pathway. (Figure 15–56)

A

cytokine receptor

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25
Q

Enzyme activated by certain cell-surface receptors (tyrosine-kinase-associated receptors) that transmits the receptor signal onward by phosphorylating target cytoplasmic proteins on tyrosine side chains.

A

cytoplasmic tyrosine kinase

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26
Q

Single-pass transmembrane signal protein displayed on the surface of cells that binds to the Notch receptor protein on a neighboring cell - activating a contact-dependent signaling mechanism.

A

Delta

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27
Q

see adaptation

A

desensitization

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28
Q

Lipid produced by the cleavage of inositol phospholipids in response to extracellular signals. Composed of two fatty acid chains linked to glycerol - it serves as a small signaling molecule to help activate protein kinase C (PKC). (Figure 15–28)

A

diacylglycerol (DAG)

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29
Q

Scaffold protein recruited to the Frizzled family of cell-surface receptors upon their activation by Wnt binding that helps relay the signal to other signaling molecules.

A

Dishevelled

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30
Q

Specialized animal cell that secretes a hormone into the blood. Usually part of a gland - such as the thyroid or pituitary gland.

A

endocrine cell

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31
Q

A major type of cell-surface receptor that has a cytoplasmic domain that either has enzymatic activity or is associated with an intracellular enzyme. In either case - the enzymatic activity is stimulated by an extracellular ligand binding to the receptor. (Figure 15–6)

A

enzyme-coupled receptor

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32
Q

One of a family of membrane-bound protein ligands for the Eph receptor tyrosine kinases (RTKs) that - among many other functions - stimulate repulsion or attraction responses that guide the migration of cells and nerve cell axons during animal development.

A

ephrin

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33
Q

Small gas molecule that is a plant growth regulator influencing plant development in various way including promoting fruit ripening - leaf abscission - and plant senescence and functioning as a stress signal in response to wounding - infection - and flooding.

A

ethylene

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34
Q

Any secreted or cell-surface chemical signal that binds to receptors and regulates the activity of the cell expressing the receptor.

A

extracellular signal molecule

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35
Q

Cytoplasmic tyrosine kinase present at cell–matrix junctions (focal adhesions) in association with the cytoplasmic tails of integrins.

A

focal adhesion kinase (FAK)

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36
Q

Family of cell-surface receptors that are seven-pass transmembrane proteins that resemble GPCRs in structure but do not generally work through the activation of G proteins. Activated by Wnt binding to recruit the scaffold protein Dishevelled - which helps relay the signal to other signaling molecules.

A

Frizzled

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37
Q

A trimeric GTP-binding protein with intrinsic GTPase activity that couples GPCRs to enzymes or ion channels in the plasma membrane. (Table 15–3 - p. 846)

A

G protein (trimeric GTP-binding protein)

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38
Q

A seven-pass cell-surface receptor that - when activated by its extracellular ligand - activates a G protein - which in turn activates either an enzyme or ion channel in the plasma membrane. (Figures 15–6 and 15–21)

A

G-protein-coupled receptor (GPCR)

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39
Q

Member of a family of enzymes that phosphorylates multiple serines and threonines on a GPCR to produce receptor desensitization. (Figure 15–42)

A

GPCR kinase (GRK)

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40
Q

Class of G protein that couples GPCRs to phospholipase C-β to activate the inositol phospholipid signaling pathway.

A

Gq

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41
Q

Protein that binds to a GTPase and inhibits it by stimulating its GTPase activity - causing the enzyme to hydrolyze its bound GTP to GDP. (Figure 15–8)

A

GTPase-activating protein (GAP)

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42
Q

Protein that binds to a GTPase and activates it by stimulating it to release its tightly bound GDP - thereby allowing it to bind GTP in its place. (Figure 15–8)

A

guanine nucleotide exchange factor (GEF)

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43
Q

Secreted extracellular signal molecule that has many different roles controlling cell differentiation and gene expression in animal embryos and adult tissues. Excessive Hedgehog signaling can lead to cancer.

A

Hedgehog protein

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44
Q

Signal molecule secreted by an endocrine cell into the bloodstream - which can then carry the signal to distant target cells.

A

hormone

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45
Q

Inhibitory proteins that bind tightly to NFκB dimers and hold them in an inactive state within the cytoplasm of unstimulated cells.

A

IκB

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46
Q

Protein with four or five immunoglobulin-like domains and two or three fibronectin-type-III-like domains; located on the cell surface and thought to serve as co-receptors for Hedgehog proteins.

A

iHog

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47
Q

Trimeric G protein that can regulate ion channels and inhibit the enzyme adenylyl cyclase in the plasma membrane. (Table 15–3 - p. 846)

A

inhibitory G protein (Gi)

48
Q

Small intracellular signaling molecule produced during activation of the inositol phospholipid signaling pathway. Acts to release Ca2+ from the endoplasmic reticulum. (Figures 15–28 and 15–29)

A

inositol 1 -4 -5-trisphosphate (IP3)

49
Q

Intracellular signaling pathway that starts with the activation of phospholipase C and the generation of IP3 and diacylglycerol (DAG) from inositol phospholipids in the plasma membrane. The DAG helps to activate protein kinase C. (Figures 15–28 and 15–29)

A

inositol phospholipid signaling pathway

50
Q

Compact protein module - found in many intracellular signaling proteins - that binds to a particular structural motif (e.g. - a short peptide sequence - a covalent modification - or another protein domain) in another protein or lipid.

A

interaction domain

51
Q

Ion channel found at chemical synapses in the postsynaptic plasma membranes of nerve and muscle cells. Opens only in response to the binding of a specific extracellular neurotransmitter. The resulting inflow of ions leads to the generation of a local electrical signal in the postsynaptic cell. (Figures 15–6 and 11–35)

A

ion-channel-coupled receptor (transmitter-gated ion channel - ionotropic receptor)

52
Q

Gated Ca2+ channel in the ER membrane that opens on binding cytosolic IP3 - releasing stored Ca2+ into the cytosol. (Figure 15–29)

A

IP3-gated Ca2+-release channel (IP3 receptor)

53
Q

Signaling pathway activated by cytokines and some hormones - providing a rapid route from the plasma membrane to the nucleus to alter gene transcription. Involves cytoplasmic Janus kinases (JAKs) - and signal transducers and activators of transcription (STATs).

A

JAK–STAT signaling pathway

54
Q

Cytoplasmic tyrosine kinases associated with cytokine receptors - which phosphorylate and activate transcription regulators called STATs.

A

Janus kinases (JAKs)

55
Q

Intracellular signaling pathway in which one protein kinase - activated by phosphorylation - phosphorylates the next protein kinase in the sequence - and so on - relaying the signal onward.

A

kinase cascade

56
Q

Co-receptor bound by Wnt proteins in the regulation of β-catenin proteolysis.

A

LDL-receptor-related protein (LRP)

57
Q

Common type of receptor serine/threonine kinase in plants that contains a tandem array of leucine-rich repeat sequences in its extracellular portion.

A

leucine-rich repeat (LRR) receptor kinases

58
Q

Extracellular signal molecule that acts on neighboring cells.

A

local mediator

59
Q

An intracellular signaling module composed of three protein kinases - acting in sequence - with MAP kinase as the third. Typically activated by a Ras protein in response to extracellular signals. (Figure 15–49)

A

MAP kinase module (mitogen-activated protein kinase module)

60
Q

A single-subunit enzyme that converts GTP to GDP (also called small monomeric GTP-binding proteins). Cycles between an active GTP-bound form and an inactive GDP-bound form and frequently acts as a molecular switch in intracellular signaling pathways.

A

monomeric GTPase

61
Q

The TOR of mammalian cells - which exists in two functionally distinct multiprotein complexes.

A

mTOR

62
Q

Latent transcription regulator that is activated by various intracellular signaling pathways when cells are stimulated during immune - inflammatory - or stress responses. Also has important roles in animal development. (Figure 15–62)

A

NFκB protein

63
Q

Gaseous signal molecule that is widely used in cell–cell communication in both animals and plants. (Figure 15–40)

A

nitric oxide (NO)

64
Q

Enzyme that synthesizes nitric oxide (NO) by the deamination of arginine. (Figure 15–40B)

A

NO synthase (NOS)

65
Q

Transmembrane receptor protein (and latent transcription regulator) involved in many cell-fate choices in animal development - for example in the specification of nerve cells from ectodermal epithelium. Its ligands are cell-surface proteins such as Delta and Serrate. (Figure 15–59)

A

Notch

66
Q

Intracellular receptors for hydrophobic signal molecules such as steroid and thyroid hormones and retinoic acid. The receptor-ligand complex acts as a transcription factor in the nucleus. (Figure 15–65)

A

nuclear receptor superfamily

67
Q

G-protein-coupled receptors on the modified cilia of olfactory receptor neurons that recognize odors. The receptors activate adenylyl cyclase via an olfactory-specific G protein (Golf) and resultant increases in cAMP open cyclic-AMP-gated cation channels - allowing Na+ influx and depolarization and initiation of a nerve impulse.

A

olfactory receptors

68
Q

Short-range cell–cell communication via secreted signal molecules that act on neighboring cells. (Figure 15–2)

A

paracrine signaling

69
Q

Transmembrane protein predicted to cross the plasma membrane 12 times; much is in intracellular vesicles and some is on the cell surface where it binds the Hedgehog protein.

A

Patched

70
Q

Membrane inositol phospholipid (a phosphoinositide) that is cleaved by phospholipase C into IP3 and diacylglycerol at the beginning of the inositol phospholipid signaling pathway. It can also be phosphorylated by PI 3-kinase to produce PIP3 docking sites for signaling proteins in the PI-3-kinase–Akt signaling pathway. (Figures 15–28 and 15–53)

A

phosphatidylinositol 4 -5-bisphosphate [PI(4 -5)P2 - PIP2]

71
Q

A lipid containing a phosphorylated inositol derivative. Minor component of the plasma membrane - but important in demarking different membranes and for intracellular signal transduction in eukaryotic cells. (Figure 15–52)

A

phosphoinositide

72
Q

Membrane-bound enzyme that is a component of the PI-3-kinase–Akt intracellular signaling pathway. It phosphorylates phosphatidylinositol 4 -5-bisphosphate at the 3 position on the inositol ring to produce PIP3 docking sites in the membrane for other intracellular signaling proteins. (Figure 15–53)

A

phosphoinositide 3-kinase (PI 3-kinase)

73
Q

Membrane-bound enzyme that cleaves inositol phospholipids to produce IP3 and diacylglycerol in the inositol phospholipid signaling pathway. PLCβ is activated by GPCRs via specific G proteins - while PLCγ is activated by RTKs. (Figure 15–55)

A

phospholipase C (PLC)

74
Q

Reaction in which a phosphate group is covalently coupled to another molecule.

A

phosphorylation

75
Q

Photoprotein associated with the plant plasma membrane that senses blue light and is partly responsible for phototropism.

A

phototropin

76
Q

Plant photoprotein that senses light via a covalently attached light-absorbing chromophore - which changes its shape in response to light and then induces a change in the protein’s conformation. Plant phytochromes are dimeric - cytoplasmic serine/threonine kinases - which respond differentially and reversibly to red and far-red light to alter cell behavior.

A

phytochrome

77
Q

Intracellular signaling pathway that stimulates animal cells to survive and grow. (Figure 15–53)

A

PI-3-kinase–Akt pathway

78
Q

Signal molecule that helps coordinate growth and development. Examples are ethylene - auxins - gibberellins - cytokinins - abscisic acid - and the brassinosteroids.

A

plant growth regulator (plant hormone)

79
Q

Protein domain found in some intracellular signaling proteins. Some PH domains in intracellular signaling proteins bind to phosphatidylinositol 3 -4 -5-trisphosphate produced by PI 3-kinase - bringing the signaling protein to the plasma membrane when PI 3-kinase is activated.

A

pleckstrin homology domain (PH domain)

80
Q

Short - single - nonmotile cilium lacking dynein that arises from a centriole and projects from the surface of many animal cell types. Some signaling proteins are concentrated in the primary cilium. (Figure 15–38)

A

primary cilium

81
Q

Ca2+-dependent protein kinase that - when activated by diacylglycerol and an increase in the concentration of cytosolic Ca2+ - phosphorylates target proteins on specific serine and threonine residues. (Figure 15–29)

A

protein kinase C (PKC)

82
Q

Enzyme that catalyzes phosphate removal from amino acids of a target protein.

A

protein phosphatase

83
Q

Enzyme that removes phosphate groups from phosphorylated tyrosine residues on proteins.

A

protein tyrosine phosphatase

84
Q

Member of the Rho family of monomeric GTPases that regulate the actin and microtubule cytoskeletons - cell-cycle progression - gene transcription - and membrane transport.

A

Rac

85
Q

Monomeric GTPase of the Ras superfamily that helps to relay signals from cell-surface receptor tyrosine kinase receptors to the nucleus - frequently in response to signals that stimulate cell division. Named for the ras gene - first identified in viruses that cause rat sarcomas. (Figure 3–67)

A

Ras (Ras protein)

86
Q

Large superfamily of monomeric GTPases (also called small GTP-binding proteins) of which Ras is the prototypical member. (Table 15–5 - p. 854)

A

Ras superfamily

87
Q

Ras GTPase-activating proteins; increase the rate of hydrolysis of bound GTP by Ras - thereby inactivating Ras.

A

Ras-GAPs

88
Q

Ras guanine nucleotide exchange factors; stimulate the dissociation of GDP and the subsequent uptake of GTP from the cytosol - thereby activating Ras.

A

Ras-GEFs

89
Q

Intracellular signaling pathway that relays signals from activated receptor tyrosine kinases to effector proteins in the cell including transcription regulators in the nucleus.

A

Ras–MAP-kinase signaling pathway

90
Q

Any protein that binds a specific signal molecule (ligand) and initiates a response in the cell. Some are on the cell surface - while others are inside the cell. (Figure 15–3)

A

receptor

91
Q

Cell-surface receptor with an extracellular ligand-binding domain and an intracellular kinase domain that phosphorylates signaling proteins on serine or threonine residues in response to ligand binding. The TGFβ receptor is an example. (Figure 15–57)

A

receptor serine/threonine kinase

92
Q

Cell-surface receptor with an extracellular ligand-binding domain and an intracellular kinase domain that phosphorylates signaling proteins on tyrosine residues in response to ligand binding. (Figure 15–43 and Table 15–4 - p. 850)

A

receptor tyrosine kinase (RTK)

93
Q

A GAP protein that binds to a trimeric G protein and enhances its GTPase activity - thus helping to limit G-protein-mediated signaling. (Figure 15–8)

A

regulator of G protein signaling (RGS)

94
Q

A monomeric Ras-related GTPase that in its active form (Rheb-GTP) activates mTOR - which promotes cell growth.

A

Rheb

95
Q

Member of the Rho family of monomeric GTPases that regulate the actin and microtubule cytoskeletons - cell-cycle progression - gene transcription - and membrane transport.

A

Rho

96
Q

Family of monomeric GTPases within the Ras superfamily involved in signaling the rearrangement of the cytoskeleton. Includes Rho - Rac - and Cdc42. (Table 15–5 - p. 854)

A

Rho family

97
Q

Seven-span membrane protein of the GPCR family that acts as a light sensor in rod photoreceptor cells in the vertebrate retina. Contains the light-sensitive prosthetic group retinol. (Figure 15–39)

A

rhodopsin

98
Q

Photoreceptor cell in the vertebrate retina that is responsible for noncolor vision in dim light.

A

rod photoreceptor (rod)

99
Q

A regulated Ca2+ channel in the ER membrane that opens in response to rising Ca2+ levels and thus amplifies the Ca2+ signal.

A

ryanodine receptor

100
Q

Small intracellular signaling molecule that is formed or released for action in response to an extracellular signal and helps to relay the signal within the cell. Examples include cyclic AMP - cyclic GMP - IP3 - Ca2+ - and diacylglycerol.

A

second messenger (small intracellular mediator)

101
Q

Enzyme that phosphorylates specific proteins on serine or threonines.

A

serine/threonine kinase

102
Q

Src homology region 2 - a protein domain present in many signaling proteins. Binds a short amino acid sequence containing a phosphotyrosine. (Panel 3–2 - pp. 142–143)

A

SH2 domain

103
Q

Latent transcription regulators that are phosphorylated and activated by receptor serine/threonine kinases and carry the signal from the cell surface to the nucleus. (Figure 15–57)

A

Smad family

104
Q

Seven-pass transmembrane protein with a structure very similar to a GPCR but does not seem to act as a Hedgehog receptor or as an activator of G proteins; it is controlled by the Patched and iHog proteins.

A

Smoothened

105
Q

Family of cytoplasmic tyrosine kinases (pronounced “sark”) that associate with the cytoplasmic domains of some enzyme-linked cell-surface receptors (for example - the T cell antigen receptor) that lack intrinsic tyrosine kinase activity. They transmit a signal onward by phosphorylating the receptor itself and specific intracellular signaling proteins on tyrosines. (Figure 3–10)

A

Src (Src protein family)

106
Q

Latent transcription regulator that is activated by phosphorylation by Janus kinases (JAKs) and enters the nucleus in response to signaling from receptors of the cytokine receptor family. (Figure 15–56)

A

STAT (signal transducer and activator of transcription)

107
Q

Hormones - including cortisol - estrogen - and testosterone - that are hydrophobic lipid molecules derived from cholesterol that activate intracellular nuclear receptors.

A

steroid hormones

108
Q

G protein that - when activated - activates the enzyme adenylyl cyclase and thus stimulates the production of cyclic AMP. (Table 15–3 - p. 846)

A

stimulatory G protein (Gs)

109
Q

Intercellular signaling performed by neurons that transmit signals electrically along their axons and release neurotransmitters at synapses - which are often located far away from the neuronal cell body.

A

synaptic signaling

110
Q

Large - serine/threonine protein kinase that is activated by the PI-3-kinase–Akt signaling pathway and promotes cell growth.

A

TOR

111
Q

Large family of structurally related secreted proteins that act as hormones and local mediators to control a wide range of functions in animals - including during development. It includes the TGFβ/activin and bone morphogenetic protein (BMP) subfamilies. (Figure 15–57)

A

transforming growth factor-β superfamily (TGFβ superfamily)

112
Q

see G protein

A

trimeric GTP-binding protein

113
Q

Enzyme that phosphorylates specific proteins on tyrosines.

A

tyrosine kinase

114
Q

Cell-surface receptor that functions similarly to RTKs - except that the kinase domain is encoded by a separate gene and is noncovalently associated with the receptor polypeptide chain.

A

tyrosine-kinase-associated receptor

115
Q

Member of a family of secreted signal proteins that have many different roles in controlling cell differentiation - proliferation - and gene expression in animal embryos and adult tissues.

A

Wnt protein

116
Q

Signaling pathway activated by binding of a Wnt protein to its cell-surface receptors. The pathway has several branches. In the major (canonical) branch - activation causes increased amounts of β-catenin to enter the nucleus - where it regulates the transcription of genes controlling cell differentiation and proliferation. Overactivation of the Wnt/β-catenin pathway can lead to cancer. (Figure 15–60)

A

Wnt/β-catenin pathway