Introduction to Systematics and Taxonomy Flashcards
systematic biology is a coombination of two major disciplines in biology:
taxonomy
systematics
naming, describing, and cllassifying of organisms.
branch of biology concerned with identifying, naming, and classifyying organisms
taxonomy
relationship and evolutionary development among organisms
systematics
2 things that consist systematics
cladistics
phenetics
pathways of evolution (how)
cladistics
degree of similarity (how much)
phenetics
5 components/principles of systematic biology
classification
identification
description
nomenclature
phylogeny
principle - similarities among observed organisms
classification
3 components under the principle classification
artificial based
natural based
phylogenetic
classification using gross morphological structures
artificial based
classification based on developmental and morphological structures
natural based
classification based on genetic inheritance, similarity and difference across species
phylogenetic
principle - assignment of distinct ecological niche (specific role)
identification
principle - unique (diagnostic) characteristics of the organism
statement of characters in taxonomy
description
principle - standard naming procedures of new species
nomenclature
principle - genealogy (ancestor and descendant analysis)
phylogeny
described the idea that organic compounds (C-containing) are capable of self-assembly, self-replication, auto-catalysis of chemicals under the similar conditions in the early period of Earth.
Oparin-Haldane Hypothesis
term associated with the Primordial Soup Model
abiogenesis
other name for primordial soup model
prokaryotic cell evolution
term associated with prokaryotic ingestion model
endosymbiosis
other name for prokaryotic ingestion model
eukaryotic cell evolution
it describes that certaiin prokaryotes are capable of engulfing and assimilating other prokaryotes to generate double-membrane cells that contains combined functions of both cells.
endosymbiosis hypothesis
it describes the idea that the statistical probability of successful evolution cannot occur without a guiding intellectual cause - unlike in the theory of evolution by natural selection
intelligent design theory/hypothesis
three hypotheses explaining the origin of life
Oparin-Haldane hypothesis
Endosymbiosis hypothesis
Intelligent design hypothesis
5 mechanisms of evolution that generate biodiversity
mutation
non-random mating
gene flow (migration)
genetic drift
natural selection
mechanism of evolution - changes in the DNA yields different expressions of traits
mutation
mechanism of evolution - reproduction preference and conditions can influence the general characteristic of the population
non-random mating
mechanism of evolution - movement oof organisms across different population
gene flow (migration)
mechanism of evolution - declining frequency of specific genes is an advantage to others
genetic drift
mechanism of evolution - suitability of specific traits to environment is disadvantageous
natural selection
application of a correct name to an organism or a taxonomic group
nomenclature
standard nomenclature in naming organisms
binomical nomenclature (Linnaean)
main proponent of binomial nomenclature.
developed in the mid-eighteenth centure
Carl von Lannaeus
4 characteristics of binomial nomenclature
- binomial (2 epithet)
- genus epithet - uppercase first letter
- italicized/underline (both epithets). If genus is mentioned already, use a capital letter (G.)
- 8 hierarchical classification
8 hierarchical classification
domain
king
phylum
class
order
family
genus
species
a group of organisms that fills a particular category of classification
taxon
year that the Primordial Soup Theory ws introduced
1924
taxonomy word origin
taxis - arrangement
nomia - method
science of naming, defining, (circumscribing) and classifying groups of biological organisms on the basis of shared charactristics which includes the bases, rules, and procedures of naming organisms.
taxonomy
study of the diversification of living forms, both past and present, and the relationships among living things tthrough time.
biological systematics
or
systematic biology
used to understand the evolutionary history of life on earth.
systematics
studies the pathways of evolution
cladistics
the study of relatinoship among a group of organisms on the basis of the degree of similarity between them, be it molecular, phenotypic, or anatomical.
phenetics
analytical branch of biology that relies on fossil record data, comparative anatomy and development, and molecular data to determine evolutionary relationship
systematics
5 components of systematics
classification
identification
description
nomenclature
phylogeny
arrangement of organisms into groups on the basis of similarities
classification
3 types of classification
artificial
natural
phylogenetic
based on arbitrary, easily observable characters
artificial
uses overall simmilarity in grouping
natural
based on evolutionary descent of a group of organism
relationship depicted through phylogram
phylogenetiic
recognizing unknown specimen with an already known taxon and assigning a correct rank and position in an extant classification.
identification
involves listing taxon’s features by recognizing appropriate characters or character states known as diagnostic characters.
description
determination of a correct name for a taxonusing rules and recommendations of the CODE which contains rules to obey and has recommendations which is strongly advised to follow.
nomenclature
study of the genealogy and evolutionary histoy of a taxonomic group
phylogeny
study of ancestral relationships ad lineages; relationships are depicted through a diagram known as a phylogram/cladogram
genealogy
theory stating that all life sprouted froma complex RNA world
Ribonucleic acid (RNA) Theory
the first self-replicating information-storage molecule
catalyzed the assembly of the first proteins
RNA
RNA is older than DNA?
true
the first genetic material
RNA
RNA is older, and far more sefl-eplicating, if less efficient, than DNA
true
___ from the soup model catalyst the formation of ___ in the form of ____ which started as marine photosynthetic bacteria which emerged around 2.5 billion years ago.
RNA
prokaryotes
Cyanobacteria
the ___ and __ succeeded the cyanobacteria
Archaebacteria
Eubacteria
evolution of prokaryotes (process)
inorganic molecules > RNA nucleotides > RNA macromolecules (self-replicating) > RNA molecules catalyze protein synthesis > Proteins
___ were the first eukaryotes andd evolved into ___ the first multicellular organisms around 700 million years ago.
protists
algae
the first vertebrates to evolve into amphibians
fishes
amphibians > reptiles > birds and mammals (t/f)
true
the different genetic traits, species, and ecosystem components of the earth.
biodiversity
identified the first principle of the origin o modern biodiversity, namely that all species were linked in a single great phylogeny, or tree of life, and that all could be traced back to a presumed single original species at some distant time in the geological past.
Charles Darwin
5 mechanisms of evolution that leads to biodiversity of life
mutation
non-random mating
gene flow (migration)
genetic drift
natural selection
the changing of the structure of a
gene, resulting in a variant form that may be
transmitted to subsequent generations, caused
by the alteration of single base units in DNA, or
the deletion, insertion, or rearrangement of
larger sections of genes or chromosomes.
“mutation is, ultimately, the only way in which
new variation enters the species”
mutation
organisms choose their
mate with each other, with preference for
particular genotypes. It occurs when the
probability that two individuals in a population
will mate is not the same for all possible pairs of
individuals. Nonrandom mating can take two
forms: Inbreeding - individuals are more likely to mate with close relatives (e.g. their neighbors)
than with distant relatives.
non-random mating
is any movement of
individuals, and/or the genetic material they
carry, from one population to another. Gene
flow includes lots of different kinds of events,
such as pollen being blown to a new destination
or people moving to new cities or countries. If
gene versions are carried to a population where
those gene versions previously did not exist,
gene flow can be a very important source of
genetic variation. In the graphic below, the gene
version for brown coloration moves from one
population to another.
gene flow/migration
the genes of a strong individual
will persist and may, just by chance, leave
behind a few more descendants or genes than
other individuals. The genes of the next
generation will be the genes of the “lucky”
individuals, not necessarily the healthier or
“better” individuals.
genetic drift
the process through which
populations of living organisms adapt and
change. Individuals in a population are naturally
variable, meaning that they are all different in
some ways. This variation means that some
individuals have traits better suited to the
environment than others
natural selection
says that certain features of the universe and of living things are best explained by an intelligent cause, not an undirected process such as natural selection. (Behe MJ and Meyer SC 2018).
intelligent design theory
scientific theory which has its roots in information theory and observations about intelligent action.
intelligent design
“global species richness”
biodiversity
employs a very slim chance of creating new
species hence it requires a very long period of time.
evolution
intelligent design theory makes no statements about the identity
of the intelligent designer(s), but merely says that
intelligent action was involved at some points with the
origins of various aspects of biological life.
true
Mutation could not produce
speciation because it violates the two natural laws.
true
application of a correct name to an organism or a taxonomic group
nomenclature
why are scientific names in Latin?
latin is a dead language because it does not change or modify