Introduction to genetics flashcards
Mendel’s law of segregation
Every individual has a pair of alleles for each trait and each parent randomly passes one allele to their offspring
Mendel’s law of independent assortment
Separate genes for separate traits are passed down independently from parent to offspring Unless linked
Point mutations
In coding or noncoding regions. If in noncoding regions can still lead to disease by affecting splicing, promoter regions, etc
Missense mutations
Alter sequence of an encoding protein
Nonsense mutations
Amino acid is changed to a stop codon
Deletions or insertions
If 3 base pairs involved protein still made but altered. If not a multiple of 3 frameshift mutation occurs which usually truncates protein
Trinucleotide expansion
Amplification of 3 nucleotides-areas that have the same AA sequence over and over again. Dynamic process (tend to amplify during gametogenesis)
Factors (in genetics)
Another name for genes
Mendelian disorders
Due to mutation in single gene, follow 3 common patterns of inheritence (autosomal dominant, autosomal recessive, X-linked)
Autosomal dominant
Manifest in heterozygous state, typically have an affected parent. 50% chance of inheriting disease with one affected parent. Both males and females equally affected and disease seen in each generation.
Incomplete penetrance
Inherit a mutant gene but appear normal
Variable expressivity
Trait is seen in all patients carrying mutant gene, but different phenotypes result
Autosomal recessive
Both alleles must be mutated. 25% chance of having the disease and 50% chance of being a carrier with 2 carrier parents. Trait does not usually affect parent, but siblings may be affected. If trait very rare might be due to consanguinous coupling.
X-linked
Mutation in X chromosome. Men are hemizygous. Men do not transmit to sons but transmit to all daughters. Heterozygous woman does not express full phenotype because of the normal X copy due to X-inactivation. If “dominant” more women than men affected. If “recessive” more men affected than women. Really no such thing as dominant/recessive X-linked. If mutation in secreted protein cells can share yielding recessive behavior. If in intracellular protein (structural, regulatory) cannot share and get domanant behavior with less severe disease women.
Proband
Individual who is identified first (usually the patient)
Consanguinous marriage
Marriage between 2 related individuals
Hemizygous
One member of a chromosome pair (only one X in males)
X-inactivation
One chromosome randomly inactivated in cells of women
Pedigree rules
Box: male Circle: female Shaded: affected Slash: deceased Half-shaded: heterozygotes for autosomal recessive Dot: carrier for X-linked recessive
Huntington’s disease
Gene on chromosome 4. Autosomal dominant disease caused by trinucleotide expansion >40 repeats (every time disease passed down number of repeats changes, usually getting larger and more severe). Dementia, cholera (jerky movements).
Niemann-Pick disease
Autosomal recessive metabolic disorder caused by mutation in NPC gene. Onset in childhood. Clumsy walking, slurred speech, impaired memory, seizures.
Fragile X syndrome
Trinucleotide expansion causing autism, intellectual disability, seizures.
Co-dominant
Two different alleles expressed and influence trait, each making slightly different protein.
Mitochondrial inheritance
Inherited through maternal line. Trait appears in every generation. Rare because mtDNA changes at slow rate. Associated diseases usually affect neuromuscular system.
Mitochondrial DNA (mtDNA)
Contains 37 genes and all essential for function. 13 genes are instructions for making enzymes for oxidative phosphorylation. Remaining genes for making tRNA, rRNA. Sperm carries mitochondria in tail which falls off during fertilization.
Heteroplasmy
Presence of more than one mtDNA variant (normal and mutated). Must have enough mutated copies to show disease called threshold effect. Higher ratio of mutated copies means more severe disease. Expression is highly variable.
Epigenetics
Study of changes in gene expression or cellular phenotype caused by mechanisms other than changes in underlying DNA (meaning chemical reactions turning genes on and off). Some shown to be heritable.
Hardy-Weinberg equation
p2+2pq+q2=1 Model for calculating genotype frequencies from allele frequencies for random-mating population in equilibrium
Hardy-Weinberg 6 assumptions
- Large population 2. Random mating 3. Allele frequencies same in men and women 4. No mutation 5. No selection 6. No migration
Imprinting
Occurs in the ovum or sperm before fertilization. Both copies of genes turned on, but some genes selectively inactivated. Maternal imprinting silences of maternal allele and paternal imprinting silences paternal allele.
Prader-Willi disease
Only paternal copy activated. Loss of function genes on chromosome 15. Hyperphagia (overeating), obesity, intellectual disability.
Angelman disease
Only maternal copy active. Loss of function genes on chromosome 15. Happy, excitable, intellectual disability, speech/movement issues, seizures.