Interactions -MD2B4 Flashcards
What does clonal mean?
genetic changes are inherited when cells divide
what is progression in relation to tumorigenesis
‘cellular evaluation’ - progressive accumulation of genetic changes resulting in tumour progression from normal cells to benign tumour to malignant to metastatic tumour
name some hallmarks of cancer (10)
resisting cell death evading growth suppressors activating invasion metastasis sustained proliferative signalling avoiding immune destruction tumour-promoting inflammation genome instability and mutation introducing angiogenesis enabling replicative immmortality deregulating cellular energetics
what are the 3 DNA methylation changes that can be detected in cancer cells?
- gene-specific hypo- and hyper- methylation
- global hypomethylation across the genome
- increased incidence of mutations
what is the impact of gene-specific hypomethylation?
the gene is transcribed
removal of methylation = activation of oncogenes
give an example of the impact of gene-specific hypomethylationq
BCL-2 oncogene is hypomethylated and over transcribed in human B-cell chronic lymphocytic leukemia and breast cancer
what is the impact of gene-specific hypermethylation?
the gene is supressed
methylation = suppression of tumour genes
give an example of the impact of gene-specific hypermethylation
DNA repair: MGMT, MLH1, BRCA1 -suppressed and no longer expressed and so there is dysregulation in DNA repair leading to cancer
Apoptosis and survival
GSTP1 is methylated in >90% of prostate cancers
what are the impacts of genome-wide hypomethylation?
it happens early on and progresses over time - detected in all cancer types
hypomethylation of repetitive regions causes genome instability (deletion, insertion…)
what happens to cytosine when its methylated?
it is methylated to form 5-methylcytosine which is unstable
it can undergo spontaneous deamination and forms a thymine base
so methylation gives rise to a spontaneous mutation converting cytosine to thymine
what happens to methylation as cancer progresses?
global methylation decreases
gene-specific hypermethylation at CpG islands in promotors occurs
alteration and dysregulation of histone modifications
why are epigenetic mistakes clinically relevant?
epigenetic mistakes change and progress over time
significant clinical implications
used for detection, classification, prognosis, and treatment
what are common features of a tumour cell population?
heterogenous
0.1-0.8% of of the tumour cells are made up of cancer stem cells (cancer-initiating cells)
what are the capabilities of cancer stem cells?
drug resistant
self-renewal
differentiation
tumorigenicity when transplanted into animal host
what do cancer stem cells differentiate into?
self renewing cells and differentiated cells that make up the bulk of the tumour
what mechanisms can cacncer stem cells origionate through?
de-differentiation of somatic or differentiated cancer cells
mutations and epigenetic changes in normal stem cells or progenitor cells
what are the most commonly mutated classes of genes in cancer?
epigenetic regulators
how is epigenetics used in early cancer diagnosis?
detection of CpG island hypermethylation in biological fluids and serums
example: GSTP1 in urine specimens of patients with putative prostate cancer
how is epigenetics used in cancer prognosis?
hypermethylation of specific genes
whole DNA methylome profiles
Histone modification map
how is epigenetics used in tumour response predictions
CpG island hypermethylation as a marker of response to chemotherapy, hormone therapy and targeted therapy
example: MGMT in patients with glioma and temozolomide treatment -predicts outcomes/response to treatment
how is epigenetics used in follow up cancer appointments?
detection of CpG island hypermethylation in biological fluids and serum
e.g., p15 methylation in acute myeloid leukemia - reoccurance
what are Epidrugs?
small-molecule inhibitors that target epigenetic machinery
are dna methylation and histone modifications reversible?
yes
unlike mutations which are not
what are the main classes of epidrugs?
DNA methyltransferase inhibitors (DNMTi)
histone deacetyltransferase inhibitors (HDACi)
histone acetyltransferase inhibitors (HATi)
The aim is to activate tumour suppressor genes, deactivate oncogenes, prevent proliferation and trigger apoptosis in cancer cells
alter active site of enzymes to inhibit them