Infectious Disease Flashcards
What are bacteria?
- Single celled organisms
- Some pathogenic + cause disease
- Anaerobic (don’t need O2) or aerobic (do)
What are gram positive bacteria?
- Thick peptidoglycan wall
- Stains with crystal violet stain
What are gram negative bacteria?
- No peptidoglycan cell wall
- Doesn’t stain with crystal violet stain but will with others
- Counterstain-> binds to cell membrane so turns pink/red
What are atypical bacteria?
Not stained or cultured in the normal way (eg crystal violet or other stains)
What is the anatomy of bacteria?
- Cell wall
- Outer membrane
- Nucleic acid-> DNA
- Ribosomes-> where proteins synthesised
- Folic acid-> needed for synthesising + regulating DNA
Why do bacteria need folic acid?
needed for synthesising + regulating DNA
What are examples of gram positive cocci?
Staph, strep, enterococcus
What are examples of gram positive rods?
- Corneybacteria
- Mycobacteria
- Listeria
- Bacillus
- Nocardia
What are examples of gram +ve anaerobes?
- Clostridium
- Lactobacillus
- Acintomyces
- Propionibacterium
What are examples of gram negative bacteria?
- Neisseria meningitidis
- Neisseria gonorrhoea
- H/influenzae
- E.coli
- Klebsiella
- Pseudomonas aeruginosa
What are examples of atypical bacteria?
Leigonella, psittaci, mycoplasma pneumoniae, chlamydydophilia pneumoniae, Coxiella burnetti
What is MRSA?
- Methicillin-resistant staph aureus
- Resists beta-lactams-> penicillins, cephalosporins, carbapenems,
- Colonised on skin + resp tract
How is MRSA prevented?
- Screen via nasal + groin swabs on admission for surgery/treatment
- Chlorhexidine washes + antibacterial nasal creams
How can MRSA be treated?
Doxycycline, clindamycin, vancomycin, linezolid, teicoplanin
What are ESBLs?
- Extended Spectrum Beta-Lactamase bacteria
- Resistant to beta-lactams-> produce beta-lactamase and destroy
- Often E.coli + Klebsiella
What infections do ESBLs often cause?
E.coli + Klebsiella-> UTIs + pneumonia
How can ESBL infection be treated?
Carbapenems-> eg meropenem
How do bacteriostatic antibiotics work?
Stop bacterial reproduction + growth
How do bacteriacidal antibiotics work?
Kill bacteria directly
How does penicillin work?
Inhibits cell wall synthesis + has beta-lactam ring
How do carbapenems work?
Inhibits cell wall synthesis + has beta-lactam ring
How do cephalosporins work?
Inhibits cell wall synthesis + has beta-lactam ring
How does vancomycin work?
Inhibits cell wall synthesis + doesn’t have beta-lactam ring
How does teicoplanin work?
Inhibits cell wall synthesis + doesn’t have beta-lactam ring
How does trimethoprim work?
Inhibits folic acid metabolism
How do macrolides (eg clarythromycin) work?
Inhibit protein synthesis by targetting ribosomes
How does clindamycin work?
Inhibit protein synthesis by targetting ribosomes
How do tetracyclines (eg doxycycline) work?
Inhibit protein synthesis by targetting ribosomes
How does gentamicin work?
Inhibit protein synthesis by targetting ribosomes
How does chloramphenicol work?
Inhibit protein synthesis by targetting ribosomes
How does metronidazole work?
- Is reduced to active form in anaerobic cells then inhibits nucleic acid synthesis
- Effective against anaerobes
How many people with penicillin allergy also have cephalosporin + carbapenem allergy?
Around 1%
What is the treatment pathway for a hospital patient with infection?
- Start with amoxicillin-> strep, listeria, enterococcus
- Switch to co-amoxiclav-> staph, haemophilus, E.coli
- To tazocin-> pseudomonas
- To meropenem-> ESBLs
- Add teicoplanin/vancomycin-> MRSA
- Add clarithromycin or doxycycline-> atypicals
What is the pathophysiology of sepsis?
- Pathogen recognised by macrophages, lymphocytes + mast cells
- Release cytokines etc-> activate other systems + make endothelial BV lining more permeable
- Fluid into extracellular space-> oedema + less IV volume-> space between blood + tissues-> less O2 to tissues
- NO release-> vasodilation
- Coagulation activation-> fibrin circulating-> less tissue perfusion + platelets consumed to form clots-> DIC (thrombocytopaenia + haemorrhages)
- Hypoperfusion-> raised lactate (anaerobic resp)
- Disregulated immune response
What is sepsis?
Disregulated immune response to infection causing systemic inflammation
What is septic shock?
- Systolic BP <90 after fluid resus
- Lactate >4mmol/L (hypoperfused tissues)
- Circulatory, cell + maetabolic abnormalities
How is septic shock managed?
IV fluids, ICU, inotropes (noradrenaline- stimulate CV system)
What are the features of severe sepsis?
Hypoxia, oliguria, AKI, thrombocytopaenia, coagulation dysfunction, lactate >2mmol/L
What are the risk factors for developing sepsis?
- Age <1 or >75
- Chronic conditions
- Chemo, steroids, immunosuppressants
- Recent burns
- Pregnant or pregnant in last 6 weeks
- trauma or surgery in last 6 weeks
- Catheters + central lines
- IVDU
What infections commonly cause sepsis?
Pneumonia, UTI, abdominal, skin/soft tissue
What are the signs of sepsis?
- Tachypnoea often first
- Picked up on NEWS score
- Infection, non-blanching rash, reduced UO, mottled skin, cyanosis
- New onset AF
- Obs might be normal in neutropaenic or immunosuppressed patients
At what NEWS score should you be worried about sepsis?
Definitely 5+ but depends on patient
What are the red flag features of being at high risk for sepsis?
If 1+ should suspect…
- New onset or altered mental state
- Systolic BP <90 or >40 change
- HR >130
- RR >25
- SpO2 92% on oxygen
- Lactate >2
- AKI
- Recent chemo
- No PU in 18 hours
- Non blanching rash
- Mottled skin
What are the amber flag features of being at risk for sepsis?
Investigate + review within 1 hour if 2+ are present…
- Mental status concerns
- Systolic BP 91-100
- HR 91-130
- RR 21-24
- Immunosuppressed or recent trauma/surgery
- Acute deterioration of functional ability
When might lactate be falsely elevated?
Alcoholics, liver disease, adrenaline nebs
How is sepsis investigated?
- Bloods-> FBCs, U+Es, LFTs, CRP, clotting
- Blood culture
- Blood gas-> lactate
- Locate source-> urine dip + culture, CXR, CT abdomen, LP
How is sepsis managed?
- Sepsis 6 (BUFALO)-> blood culture, urine output, fluids, antibiotics (broad spec), lactate, oxygen
- IV crystalloids-> stat boluses but call critical care if oedema or 2L+ given
- Local guidelines for antibiotics-> co-amoxiclav in South Yorkshire
What is neutropaenic sepsis and what features might suggest it?
- Neutrophils <1 x 10^9/L
- Temperature 38+
What can cause neutropaenic sepsis?
- Chemo
- Clozapine
- Immunusuppressants eg methotrexate or infliximab
- -Carbimazole
- Quinine
How is neutropaenic sepsis treated?
Tazocin (piperallicin + tazobactam)
What are common causes of chest infections?
- Viral most common
- Strep pneumoniae (50%)
- H.influenzae (20%)
- Moraxella catarrhalis-> COPD
- P.aeruginosa-> CF, bronchiectasis
- S.aureus-> CF
- Atypicals eg leigonella
What antibiotics are usually used in chest infections?
- Amoxicillin
- Erythromycin
- Clarithromycin
- Doxycycline
What bacteria/pathogens usually cause UTIs?
- E.coli
- Klebsiella
- Enterococcus
- P.aeruginosa
- Candida albicans
What often causes bacteria/pathogens to enter the urethra and cause UTIs?
- Faeces-> intestinal bacteria
- Incontinence or hygiene issues
- Urinary catheters
How do lower UTIs present?
- Dysuria, frequency, urgency, incontinence
- Suprapubic pain/discomfort
- Cloudy/smelly urine
- Haematuria
- Confusion
How does pyelonephritis present?
- Fever, unwell, vomiting, loss of appetite
- Loin, suprapubic, back pain-> uni or bilateral
- Haematuria
- Renal angle tenderness
What are nitrites?
- Nitrates are a waste product of urine
- Are broken down by gram negative bacteria into nitrites
- Indicator of UTI
What does a urine dip result of +ve for nitrites and WBCs indicate?
Diagnostic of UTI
What does a urine dip result of +ve for nitrites only indicate?
Diagnostic of UTI
What does a urine dip result of +ve for WBCs only indicate?
Not UTI unless clinical evidence
Why might RBCs be present in urine?
UTI, nephritis, cancers
When is it important to include MSU (midstream urine sample for culture) in investigations for UTI?
Complicated UTI-> pregnancy, UTIs, atypical symptoms, when not improved with antibiotics
How is UTI managed (simple, in women)?
3 days of trimethoprim or nitrofurantoin or amoxicillin
How is UTI managed (men, pregnancy or catheter-associated)?
7 days of trimethoprim or nitrofurantoin or amoxicillin
How is UTI managed (immunosuppressed, abnormal anatomy, kidney issues)?
5-10 days of trimethoprim or nitrofurantoin or amoxicillin
When should nitrofurantoin be avoided?
eGFR <45
What risks do UTIs pose in pregnancy?
Pyelonephritis, PrOM, pre-term labour risks
How is UTI in pregnancy managed?
- 7 days antibiotics even if asymptomatic
- Nitrofurantoin-> NOT in 3rd trimester (haemolytic anaemia of newborn risk)
- Trimethoprim-> not in 1st trimester (anti-folate and neural tube defect risks)
When and why should trimethoprim be avoided in pregnancy?
in 1st trimester (anti-folate and neural tube defect risks)
When and why should nitrofurantoin be avoided in pregnancy?
in 3rd trimester (haemolytic anaemia of newborn risk)
How is pyelonephritis managed?
- 7-10 days of cefalexin, co-amoxiclav, trimethoprim or ciprofloxacin
- Investigate renal abscess or stones if doesn’t respond
What are the side effects of ciprofloxacin?
Tendon damage + lowers seizure threshold