Immunology I Flashcards
What are the three primary levels of defence of the immune system?
1/ External barriers
2/ Innate immunity
3/ Adaptive immunity
What are the main differences between the innate and the adaptive immunity? <Hint: 6 differences>
1/ Complements - Antibodies
2/ Broad specificity - High specificity
3/ Chiefly disposal - Mainly recognition
4/ Rapid - Slow
5/ No memory - Memory cells
6/ Both invertebrates and vertebrates - Only vertebrates
The three key features of the immune system:
- Ability to recognise pathogens AND differentiate non-self
- Mechanisms to kill or to eliminate the pathogens
- Method of coordinating the activities by the use of signalling molecules called cytokines
Define cytokines and give examples
LMW proteins
Cellular growth, differentiation and inflammation and repair
Examples: IL, IF, TNF, colony-stimulating factors, chemokines
How are non-self cells recognised by innate immunity?
Pattern recognition receptors (PPRs)
Identify PAMP (pathogen-associated molecular patterns) - common antigens
PPRs: both cell surface and cytoplasm
4 main types of PAMPs
Nucleic acid - ssRNA, dsRNA (virus)
Proteins - pilin, flagellin (bacteria)
Cell wall lipids - LPS (gram-negative), lipoteichoic acid (gram-positive bacteria)
Carbonhydrates - Mannan, Dectin glucans (fungi and bacteria)
How does the body recognise previously non-encountered pathogens?
Through TCRs and BCRs
Highly specific
Target: peptides present on MHC (major histocompatibility complex) molecules
Compare the receptor variation between innate and adaptive
Innate: not varied system of receptors. Same type of cells = same types of receptors.
Adaptive: each cell contains unique receptors
Primary lymphoid organs
Lymphocyte formation, development and maturation
Bone marrow and thymus
Secondary lymphoid organs
Recognising and responding to foreign materials
Lymph nodes (tonsil etc), spleen, Peyer’s patches
Lymphatic system and infection
Antigens captured - enter lymphatic system -> regional lymph nodes
Lymphocytes will parade to the infected areas from the lymph nodes
Adhesion molecules + chemokines attract lymphocytes to infected tissues
Recirculation of lymphoid system
Constant flow of lymphocytes from blood -> tissue -> lymph -> blood
Allow lymphocytes to make contact with antigen no matter its location
Neutrophils enter infected tissues, not return
Composition of innate immunity
Physicochemcial or biochemical factors/barriers
Humoral system
Cellular system
Physicochemical factors of innate immunity include:
Mechanical barriers - keratinised epithelium of skin
Antimicrobial enzymes
Antimicrobial substances produced by innate immunity
Lysozyme: hydrolyses peptidoglycan
Phospholipase A2: destroy bacterial membrane
Defensins: cationic peptides, form pors on bacterial membrane
How does Innate system cause inflammatory response?
Activation of complements
Activation and attraction of phagocytic cells - cytokine releases
Activation of natural killer cells
Altering the vascular permeability
Increasing body temp (cytokine effects)
4 main characteristics of inflammation
- Pain: dilation - tissue - pain receptors
- Heat: dilation - movement of cytokines
- Redness: blood accummulation
- Swelling: fluid accummulation
Definition of complements
Soluble humoral factors
Bring about the lysis of the bacteria
Roles of complements in inflammation and immunity
Chemotaxis of phagocytes
Activate mast cells
Opsonisation and cell lysis
Immune complex clearance
Three activation pathways of complements
Classical pathway: complement - antibodies -> activation + cascade reaction -> lysis
Lectin pathway: complement - sugar complex -> activation + cascade reaction -> lysis
Alternative pathway: complement - direct binding to surface
Complement recognition in Classical pathways
C1qrs - antibodies on microbe
Mechanism of activation - Classical Pathways
C1qrs bind to antibodies -> conformational change -> C4 bind + C1qrs activated C1r2s2 (serine protease) -> C1r2s2 cleaves C4 into C4b -> C4b bind to Ab -> C2 bind to C4b, get cleaved to 2b -> 2b bind -> C4b2b (C3 convertase)
C4b2b cleaves C3 into C3a + C3b
C3b involved cleaving C5 into C5a + C5b
General mechanism of activation of complement activation pathways
Recognition and binding
Conformational changes -> activation of serine protease
Hydrolysis of the next component in cascade
Binding, further conformational changes
More serine protease activation
Repeats until C3 convertase produced
C3 convertase -> C3a (inflammatory response) and C3b (cell lysis, phagocytosis and immune complex clearance)
General roles of C3a, C3b, C5a and C5b in immune response
C3a -> inflammation
C3b -> opsonisation and phagocytosis
C5a -> inflammation
C5b -> lysis of bacteria (MAC)
Complement recognition in Lectin pathways
Mannose-binding lectin (MBL) - mannose
Ficolin - N-acetylglucosamine
C1 inhibitors definition and mechanism of action
Plasma serine protease inhibitor controlling the classical and lectin pathways
remove the C1r and C1s from the complex -> no enzyme C1r2s2 -> no classical pathways
remove MASP-2 from MBL or ficolin -> no lectin pathway
Mechanism of activation - Lectin pathways
MBL (collectins) interact with mannose -> activation and complexing with MASP-1 and MASP-2 -> C4 and C2 is cleaved into C4b and 2b -> Formation of C4b2b (C3 convertase)
C4b2b cleaves C3 into C3a + C3b
C3b involved cleaving C5 into C5a + C5b
Mechanism of activation - alternate pathways
Spontaneous activation of C3 -> C3b
Normally inactivated by hydrolysis, but in infection + Mg2+ ions present -> bind to surface -> no inactivation
C3b + factor B -> C3bB complex
Factor D cleaves factor B into Ba (leave) + Bb (bind to form C3bBb = C3 convertase)
Factor P (properdin) stabilises C3bBb
Another C3b binds to C3bBb to form C5 covertase
Regulation of alternate pathways
Factor I and factor H in plasma: cleave C3b -> iC3b
Membrane cofactor protein (MCP): cleave C3b -> iC3b
Complement receptor 1: cleave C3b -> iC3b
Decay accelerating factors (DAF): displacement Bb -> no C3bBb
Membrane attack complex (MAC). Definition and formation.
C5 convertase (from C3b) -> C5b fragment
C5b combine with C6,C7,C8 -> MAC form
MAC makes holes in bacterial membrane -> lysis
How are host cells protected from MAC?
CD59 protein on the cell membrane -> prevent insertion of C9 proteins (pore forming agents) -> no MAC
Fluid phase regulator S protein -> interfere insertion of C5b - C7 complex -> no MAC
Explain the biological activities of complement activation <Hint: 5 points>
- MAC formation -> bacteria osmotic lysis (C5 covertase)
- Opsonisation -> stimulate neutrophillic removal
- Opsonisation -> C3b receptor recognition -> phagocytosis
- Recruitment and activation of cells and promote inflammation (C4a, C3a and C5)
- Removal of immune complexes (C3b) -> maintain small + attach to Erythrocyte CR-1 -> removal by liver and spleen via resident macrophage
What does activation of PPR upon binding to PAMPs lead to?
Dimerisation of 2 receptors
Binding of adaptor molecules like Myd88 and TRIF -> stimulate signalling pathways
Gene activation
Pro-inflammatory cytokine production
Stimulation of adaptive immunity
Interferon production
Dependent on type of activated receptors + cross-talk between diff sginalling pathways
How are macrophages activated?
Microbial products
IFN-gama released from NK cells
The proteins produced by activated macrophages
Phagocyte oxidase: produce reacive oxygen species -> kill
iNOS - produce nitric oxide -> kill
Cytokines like TNF, IL-1, IL-12: inflammatory response + enhance adaptive immunity
Fibrolast growth factor: tissue remodelling
Angiogenic factor: tissue remodelling
Metalloproteinases: tissue remodelling
Activity of IL -1
Act on: vascular endothelium
Increased permeability
Stimulate production of IL-6
Activity of IL-6
Act on: Liver
Produce acute phase proteins like CRP
Elevate body temperature
Activity of IL-8
Act on: vascular endothelium
Activate vascular endothelium
Attract and activate neutrophils
Activity of IL-12
Act on: NK cells
Activate NK cells
Influence lymphocyte differentiation
Activity of TNF-alpha
Act on: vascular endothelium
Increased permeability
Activate vascular endothelium
How do cytokines exert their effects locally and systemically?
Local inflammation - production of adhesion molecules + increase in permeability of cells -> allow innate immunity cells to enter tissue
Local effects - trigger production of more cytokines molecules
Systemic effects - protective effects and pathological effects
Examples of how cytokines involved in protective systemic effects
TNF, IL-1, IL-6 - brain - fever
IL-1, IL-6 - liver - acute phase proteins labelling the microorganism.
TNF, IL-1, IL-6 - bone marrow - lymphocyte productions
Examples of how cytokines involved in pathological effects
TNF - heart - increased heart rate
TNF - endothelial cells + blood vessels - increased permeability
TNF - insulin resistance in many tissues
Name and describe some examples of phagocytic cells
PMN - phagocytosis and killing of bacteria and fungi
Monocyte - Precursor of macrophage
Macrophage - phagocytosis
Kupffer cells - Major phagocyte in liver - clear blood
Mesangial cells - phagocyte in renal glomerulus - remove complexes
Microglial cells - phagocyte in brain
Dendritic cells - APC of lymphoid tissue
Langerhans cell - dendritic cell of skin
Neutrophils - definition
Produced in bone marrow
PMN leukocytes, granulated cells
Many types of receptors on the surface
What are the different types of receptors present on the surface of neutrophils?
Recognise PAMPs
Recognise antibodies
Recognise complement components
Neutrophils - margination
Neutrophils rolling along the margin of blood vessels
Allow to stop at site of infection and pass into tissues
Via weak interaction between the selectin ligands on neutrophils and the glycoprotein on endothelial cells
Neutrophils - Entering the damaged tissue
Mediators attracting neutrophlls are released
Endothelium respond to distress signal -> release intracellular adhesion molecules (ICAMs)
ICAMs induce tighter binding of neutrophils to cells in damage regions
Chemotaxins - neutrophil cross junction (diapedesis)
Migrate towards site of infection down chemotactic gradients (chemotaxis)
Potent chemotactic factors
Complement C5a
Chemokine IL-8 released from damage tissue
Bacterial cell wall products like N-formylated peptide
LTB4, a leukotriene pro-inflammatory mediator released by neutrophils
Neutrophil - chemotaxis
Chemostatic factors bind to receptors on the edge
Pseudopodium formation (foot-like extension) -> movement
Neutrophil - phagocytosis
Approach the bacteria - engulf (phagocytosis)
Ineffective without co-factors and opsonins coating the surface
Opsonin bind to neutrophil receptor -> pseudopodia formation -> engulf -> localise within phagosome
Name highly effective opsonins
Complement components
C-reactive proteins
Antibodies
Neutrophil - killing mechanism
Oxygen independent
Oxygen dependent
Neutrophil - oyxgen-independent mechanism
Lysozyme: hydrolyse cell wall
Lactoferrin: iron-binding protein -> reduce irons available
Defensins: direct insert -> damage membranes
Phospholipase A2: enzymatic activity -> damage membrane
Can act synergistically (BPI and phospholipase A2)
Important in highly anaerobic conditions like deep abscesses