Immunology Flashcards
What can break anergy?
Infection; increased PAMPs =» increased MHC expression
Autoimmune Lymphoproliferative Disorder (ALPS)
Deficiency of Fas-FasL apoptosis
=»Hepatosplenomegaly, lymphadenopathy
Phenotypic Characteristics of T-reg cells
- Expression of Foxp3
- Expression of CD-25
- Constitutive and High Expression o CLTA-4
IPEX Syndrome
Immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome
- Caused by mutation in Foxp3 gene =» deficiency of t-reg cells
- Triad= Watery diarrhea, eczematous dermatitous, and endocrinopathy
Mechanisms of B-cell peripheral tolerance
- Anergy (lacks CD40-CD40L bnding)
2 Clonal deletion
- Can occur w/ repeated stimulation of BCR =» Increased BAFF/Blys requirement for survival
- Also occurs via mitochondrial and Fas pathway
CTLA-4 polymorphisms
Assoc. w/ decreased mRNA levels and Grave’s Disease, Hashimoto’s, and SLE (for example)
C4, C2 deficiencies
Leads to deposition of immune complexes in blood vessels activating the alternative pathway»_space; Increased penetration of PMNs into tissue and destruction of tissue
(Type III hypersensitivity)
PTPN22
Gene involved in receptor TK formation
-Commonly assoc. w/ RA, IBD, and TD1M
NOD2
Gain-of-function mutant of cytoplasmic bacterial sensor commonly assoc. w/ IBD
AI preferential exception for Males
Ankylosing spondylitis and Goodpasture’s syndrome
Anergy
Occurs when a primary binding event occurs b/w and APC and T-cell but no secondary signal (CD28-B7)
Results in:
1. Decrease in TCR complexes (mediated by Cbl-b degradation)
- Engagement of inhibitory receptors (CTLA-4 binds to B7 and PD-1 blocks t-cell activation/pro-inflammatory secretion)
Molecular Mimcry
Occurs when an infectious agent expresses a similar epitope to that of a self-Ag =»Autoimmunity
*S. pyogenes =» ARF
EBV =» MS (protein resembles human myelin basic protein)
By-stander activation
Basically the same as Molecular Mimicry
BUT
this is caused by activated APCs presenting cross-reactive self-Ag to autoreactive T-cells
RXN IS INITIATED BY SELF-ANTIGEN IN FIRST PLACE
Epitope spreading
AI response expands to more self-Ags than just the one the initial Ag that caused the attack
=»Self-perpetuating and flaring up seen w/ conditions like pemphigus
Cryptic epitope
Antigenic epitopes not presented to T-cells in sufficient amounts to activate T-cells BUT become abundant after tissue destruction during inflaammation
Conventional Therapy for AI disease
Includes corticosteroids (anti-inflammatories) and immunosuppresants that limit t-cell activation
Immunotherapy for AI disease
Administration of agents that block pro-inflammatory cytokines and target autoreactive T and B-cells
Radiation oncogenesis
UV radiation leads to the formation of pyrimidine dimers that can overwhelm the nucleotide excision pathway =» Melanomas
*High melanin decreases risk for this
Ionizing Radiation
Directly fractures the DNA double helix; hematopoietic, thyroid, and breast tissues are especially sensitive
*Bone, GI, and skin are NOT sensitive
CYP1A1 Allele
Cytochrome-P450 mutation that converts smoke, an indirect chemical mutagen, into a much more highly potent intermediate
Direct-acting alkylating agents
Act as direct chemical carcinogens that are usually assoc. w/ chemotherapy
Polycyclic Aromatic Hydrocarbons
Include fossil fuels and cigarette smoke; extremely potent carcinogenic agents that cause a predilection for lymphoma/leukemia
Aflatoxin B1
Assoc. w/ Aspergillus that is found on improperly stored nuts
=» Mutation of the p53 gene causing a substitution of serine for arginine @ codon 249; causes hepatocellular carcinoma
Lead Time Bias
False, but apparent, improvement in survival time caused by earlier detection of cancer
Length Bias
Earlier detection of cancer tends to pick up less aggressive variants
*Is treated the same way as an aggressive variant leading to a perceived increase in survival rate
Paraneoplastic syndromes
Hormones not normally made by the tumor tissue cause unusual symptoms; can be the first sign of a metastatic tumor
Carcinoid Syndrome
Excess secretion of serotonin and bradykinin leading to hypotension
*Caused by hepatocellular, lung, and pancreatic carcinomas
Lambert-Eaton Syndrome
Myasthenia caused by paraneoplastic production of Abs to nerve endings
*Caused by lung cancer
Hypertrophic Osteoarthropathy
Excessive new growth of long bones at the ends along w/ arthritis and clubbing of the digits
*Paraneoplasm caused by bronchogenic carcinoma
Trosseau Syndrome
Migratory thrombophlebitis that is caused by lung and pancreatic tumors
DIC (paraneoplastic cause)
APML, prostate cancer
Nonbacterial thrombotic endocarditis (Marantic)
Fibrin growth on valve leaflets caused by mucin-secreting carcinomas
E.g.-pancreatic cancer
- Also caused by SLE and ARF
- typically on the mitral valve
Mass Effect
(1) - Tumor size grows and compresses structures
- Especially in the skull where there is nowhere for it to go
(2) - Metastasis causes tumors to disrupt fnxn of other organs
(3) - Tumors can cause failure of organ
Pseudomyxoma peritonei
Gelatinous mass on the peritoneum originating from a mucous-secreting appendix carcinoma
Skip metastasis
Metastasis of a tumor past the first lymph node due to the anastomoses of the lymphatics
Dormancy
Prolonged survival of metastasis w/o progression
Pseudotumor
Non-neoplastic tumor
E.g.-Swelling from inflammation
Scirrhous
Dense desmoplasia making tumors rock hard
Nevus
Benign proliferation of melanocytes
Mesothelioma
Malignancy of mesothelial cells
Seminoma
Malignancy of germ cells; ovarian subtype is called dysgerminoma
Hepatoma
Malignant liver tumor
Papillary cystadenocarcinoma
Malignant finger-like projections in a tumor derived from glands making a cyst
*True papillary structures will have a central blood vessel
Papillary carcinoma
Malignant, finger-like projections?
Keratin pearls
Structure seen w/ SCC
Carcinosarcoma
Uncommon uterine tumor w/ both malignant glands and stroma
Hamartoma
A benign, clonal proliferation where the right cells are seen in the right place BUT w/ the wrong proliferation
Choristoma
The wrong cells are seen in the wrong place BUT in the right type of arrangement
Characteristics of Dysplasia
Pleomorphism
Loss of polarity
Increased mitotic figures
Carcinoma in Situ
Severe Dysplasia; seen w/ marked pleomorphism and thickness changes in the epithelium
*Still does not invade the BM
Tumor Staging
(T)umor: Size and extent of invasion
(N)ode: # of lymph nodes involved
(M)etastasis
Warburg Effect
Tumors use large amounts of glucose regardless of what is available to the cell but lack ATP production from mitochondria
=»Advantage this gives the cell is that there are increased Krebb cycle intermediates that are available for catabolic metabolism
PET
Measures the uptake of 18F-fluorodeoxyglucose by the tumor cell as a sign of the Warburg Effect
=»Also seen w/ increased respiratory activity
MDR-1
Multi-drug resistance expressed by tumor cells that make them resilient to chemotherapy
HNPCC
Hereditary NonPolyposis Colon Cancer
Mutation in MMR genes
Sporadic Colon Cancer
Somatic loss of MMR genes of APC genes
Xeroderma Pigmentosum
Cross-linking of pyrimidine residues cannot be repaired due to loss of nucleotide excision mechanisms
=»Terrible skin condition
Advantageous features for a neoplasm
- Uncontrolled replication
- Loss of TSGs, contact inhibition, activation of protooncogenes
- Immortality
- Disruption of apoptosis, activation of telomerase
- Loss of DNA repair
- Gatekeeper mutations
p53 mutation
Point mutations in this gene are the most genetic alteration in cancer
*Levels will actually be INCREASED as the cell tries to produce more to regain proper fnxn
HPV alteration of p53
E6 protein produced binds to p53 and promotes degradation
*E7 protein binds RB and prevents G1 =» S transition
Li-Fraumeni Syndrome
One inherited loss of p53 gene followed by a somatic loss
=»Formation of multiple tumors at a young age
APC gene
Normally fnxns to downregulate B-catenin, a growth promoter
-Familial adenomatous polyposis occurs w/ one inherited defect along w/ a second mutation
B-catenin
Product bound to E-cadherin that when released, moves to the nucleus and upregulates cell-cycle genes
*Loss of cell-cell contact =»Release of B-catenin from E-cadherin
WNT
Signal that blocks APC fnxn
*Excessive activation of WNT =» Cell-cycle progression
RET gene
Normally functions as a growth hormone receptor to promote cell survival in neuroendocrine cells but point mutations can lead to..
MEN 2A (Extracellular Region): Medullary thyroid carcinoma, thyroid, adrenal carcinoma
Men 2B (Intracellular Region): Medullary thyroid carcinoma
C-kit gene
Growth factor receptor that when mutated causes gastrointestinal stromal tumors (GIST)
*Treated w/ TK inhibitors
t(5;12)
Translocation assoc. w/ CMML and causes excessive activation of the PDGF receptor
The Philadelphia Chromose
t(9;22) (BCR-ABL)
*Major breakpoint=cause of CML
Minor breakpoint= cause of ALL
*Gleevac= inhibitor of BCR-ABL TK; cures CML
Her-2/neu
Overexpressed NORMAL growth hormone receptor found in breast cancer
-Treated w/ Tastuzumab
EGFR
Gene that is found activated in lung and colon cancer (Outer portion of TK receptor)
Ras mutations
GTP-binding proteins that can cause a wide range of carcinomas, melanomas, and lymphomas
BRAF
v600E mutation; activated by Ras proteins in normal cascade
- Common in thyroid, melanomas, and sporadic cancers
- Target therapies for codon 600 mutations
DNA Methylation
Tumors will…
Hypomethylate protooncogenes
-Genetically unstable
Hypermethylate TSGs
-Inactivation in cases like BRCA-1(breast cancer)
Histone Acetylation
More negative charge=»More open for transcription (protooncogenes)
Reverse also applies for TSGs
*Chromatid alteration can also change the packing of DNA making it more or less available for transcription
miRNA
Binds to the UTR on the 3’end of mRNA making it more unstable and more likely to be degraded; tumors use this to decrease the mRNA of TSGs
-
RISC
RNA induced silencing complex that recognizes dsRNA since it may represent viral mRNA, degrades it, and keeps a piece to recognize future pieces of dsRNA
siRNA
Binds to the coding region of mRNAs that is used to silence complimentary RNA strands
*DICER, a protein found in cells, will chop up dsRNA to produce siRNA and silence other dsRNA
Evasion of apoptosis by tumor cells
Reduced amount of CD95
Increased Bcl-2 (stabilizes the mitochondrial membrane preventing the mitochondrial apoptotic pathway)
Decreased p53
Inhibition of caspases
FLIP(binds to Fas)
Loss of APAF-1
Immunohistochemistry
Used to categorize tumors, determine origin of metastases, and form a pronosis
What type of cancer if flow cytometry used to diagnose?
Lymphoma/leukemia
X-linked SCID
Caused by a mutation in the y-chain receptor for IL-7, 2, and 15
=» no maturation of T-cells
T-cells: Decreased
B-cells: Normal
IG: Decreased
Treatment: Stem-cell transplant ASAP; Introduction of normal y-chain gene into BM using lentivirus (can cause leukemias if placed near an oncogene)
AR SCID
Can be caused by a deficiency in ADA or PNP (JAK-3) enzymes leading to a toxic accumulation of dATP and dGTP
APA: All decreased
PNP: Only T-cells decreased