ID Unit 1 Flashcards
why do we care about ID?
common diagnosable communicable high morbidity and mortality treatable newly emerging pathogens
premonitory:
indicative of changes in host and/or environment
can be anticipated (war, famine) and prevented
IDs are going down w/ treatment advancements
3 variables that affect the development of infection and disease
microbial variables
host variables
interactions
all contribute to disease and health
Gram staining
innate immune stimulation
antimicrobial susceptibility and resistance
Gram Positive:
thick PG layer (accessible)
Teichoic acid
—certain surface antigens
Gram Negative:
thin PG cell wall (PG covered by membrane/porins)
outer membrane with LPS
4 bacterial groups based on stain and shape
GPC:
staph (catalase +)
strep (catalase -)
GPR:
Listeria (small)
Clostridium (large)
GNC:
Neisseria
Moraxella
GNR: E coli (classic lactose fermenter) Pseudomonas (classic non-lactose fermenter)
Non-staining bacteria:
can be truly neg or actually “positive” for bac that don’t stain
-No cell wall = mycoplasma; chlamydia (GN but too small to stain)
-Intracellular
-Others =
M tuberculosis (Gram+)
Rickettsia, spirochetes (Gram- too small)
Legionella spp. (Gram-)
how to Gram stain
heat slide- kill and bind bac
crystal violet (primary stain)
add iodine (mordant that binds the crystal violet to gram + cell wall)
add decolorizer (acetone alcohol to remove stain from gram - cells)
add safranin (counterstain)
~30seconds
Lactose fermenters vs non-lactose fermenters
GNRs
Lactose Fermenting GNR: E coli (INDOLE POSITIVE) Klebsiella sp. Enterobacter (Citrobacter) (Arizona)
Non-Lactose fermenting GNR: Pseudomonas aeruginosa (OXIDASE POSITIVE; strict aerobe) Salmonella Shigella all others, etc.
sources of Gram Negative Rods
intestine
-appendix, diverticulitis, gallbladder (not pseudomonas)
Urine
- pos WBC
- pos symptoms
lung/line
-nosocomial
Gram Negative Cocci
few- relatively rare
Neisseria gonorrheae
Nisseria meningitidis
Moraxella catarrhalis
Acinetobacter
Gram Positive Cocci
Pairs/clusters: Staphylococcus ---Catalase positive!!!!--- Coag positive = Staph aureus Coag negative = 31, incl S epidermis S saprophyticus S lugdanensis
S lugdanensis
Pairs/chains:
Streptococcus
—Catalase negative!
Pairs:
either
Staph aureus
superficial, deep, disseminated infections
GPC
many bugs can be virulent and invasive, or carried asymptomatically
staph clumps (Coag positive!) pus!
superficial infections:
boils, paronychia, lymphadenitis
cellulitis, impetigo
deep infections: arthritis osteomyelitis pyomyositis pneumonia (esp nosocomial)
disseminated infections:
bacteremia
-focal source, IV catheter, endocarditis
metastatic abscesses
Coagulase negative staph
ask where is the plastic/metal?
generally weak/wimpy unless you have plastic/metal to get a biofilm on
Hemolysis status of streptococci
-alpha, beta, gamma
alpha (green)
- strep pneumoniae
- Strep Viridans
beta (clear)
-beta is bad (Grade A, B, C, G)
gamma (none)
-usually incl Strep Milleri (pus)
streptococci syndromes
one bacteria- many syndromes
Group A strep- Strep Pyogenes asymptomatic colonization (nares) pharyngitis erysipelas glomerulonephritis skin, soft tissue bacteremia, sepsis Rheumatic Fever acute endocarditis pneumonia/empyema TSS Necrotizing Fasciitis
Gram positive infections
-bad and less bad bugs
Bad bugs: can cause tissue infections (pneumonia, cellulitis)
Staph aureus (incl MRSA)
Strep pneumoniae
Group A strep (S. pyogene)
Less bad bugs:
Coag neg/Staph epidermidis
Strep viridians
Enterococcus
Really wimpy bugs:
P acnes
diphtheroids
Enterococcus
S faecalis S faecium (esp VRE)
Urine Abdomen (+/- pathogenic) endocarditis (subacute)
Gram positive rods
small and large
small: **Listeria (immunocompromised, pregnant) diphtheroids P acnes actinomyces
Large:
**Clostridium sp.
Bacillus sp.
Anaerobes
sources
uncommon in blood cultures- die easily
sources: oral lung (aspiration; abscess) intestine (es B fragilis***) Female GU tract
commensal microbiota (nl flora) often anaerobes
Syndromes from the 4 bugs
GNCs:
meningitis
Neisseria- gonorrhea
Moraxella- pneumonia
GNRs:
E coli- UTI, abdominal problems
NLF- nosocomial
GPCs:
S aureus- cellulitis, endocarditis
GPRs:
Listeria- meningitis
Clostridium- Nec Fasciitis
pneumonia can be caused by
*Strep pneumoniae
*Morazella
H influenzae
Mycobacterium tuberculosis
Legionella pneumophila
skin/soft tissue syndromes can be cause day:
*Stap aureus
*Group A strep (strep progenes)
*Clostridium perfringens
Group B strep
Enteritis can be caused by
*Enterotoxic E coli
Vibrio cholerae
Colitis can be caused by
*Clostridium difficile
Shigella
Salmonella
Campylobacter jejune
Endocarditis can be caused by
*strep viridans
Staph aureus
S pneumoniae
enterococcus
Meningitis can be caused by
*Neisseria meningitidis
*Listeria
S pneumoniae
H influenzae