Homeostasis Flashcards

1
Q

What is the characteristic feature of negative control of gene expression?

A

Involves a repressor protein

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2
Q

How does negative control differ between catabolic operons and biosynthetic operons?

A

In catabolic operons, the repressor cannot bind to DNA when it is bound to an inducer
In biosynthetic operons, the repressor can only bind to DNA when it is bound to a co-repressor

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3
Q

What is the characteristic feature of positive control of gene expression?

A

Involves an activator protein

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4
Q

How does positive control differ between catabolic operons and biosynthetic operons?

A

In catabolic operons, the activator can only bind to DNA when it is bound to an inducer
In biosynthetic operons, the activator cannot bind to DNA when it is bound to an inhibitor

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5
Q

What is a regulon?

A

A set of operons in different parts of the genome which are controlled by the same mechanism (ie same regulatory protein)

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6
Q

How is it possible for a regulatory protein to control several genes or operons belonging to the same regulon?

A

The same DNA sequence, which is recognised by the regulatory protein, occurs several times in the genome

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7
Q

How can transcriptional regulatory proteins be activated or inactivated?

A
Allosteric interaction (eg with an inducer, example lac repressor)
Covalent modification (eg by phosphorylation, example two component system)
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8
Q

What is an example of a negatively controlled catabolic operon?

A

lac operon, in E. coli. lacI codes for repressor

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9
Q

What is an example of a positively controlled catabolic operon?

A

mal operon, in E. coli. malT codes for activator

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10
Q

What is unusual about the ara operon?

A

AraC acts as both a repressor and activator of gene expression

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11
Q

What is an example of a negatively controlled biosynthetic operon?

A

trp operon. trpR codes for repressor

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12
Q

What is the difference between catabolic and biosynthetic operons?

A

In catabolic operons, operons are inducible

In biosynthetic operons, operons are repressible

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13
Q

How is it possible for the same protein to act as both a transcriptional repressor and activator?

A

Depends on the position of DNA binding site
Upstream of the RNA polymerase binding site generally results in activation of gene expression, downstream of RNA polymerase binding site will result in repression

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14
Q

What is homeostasis?

A

The maintenance of the internal environment despite fluctuations of external environment

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15
Q

What do both pH and osmotic homeostasis have in common?

A

They both involve the translocation of molecules across the cell membrane, K+ ions play a role in both

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16
Q

In response to high osmolarity, what happens to synthesis of OmpC an OmpF proteins?

A

OmpC (smaller channel) synthesis increases

OmpF (larger channel) synthesis decreases

17
Q

How can internal concentration of osmolytes be increased?

A

Synthesis

Accumulation of osmoprotectants from the environment

18
Q

What does the kdp operon in E. coli do?

A

Encodes high affinity K+ ABC transport system for achieving high cellular concentration

19
Q

How can internal concentration of osmolytes be decreased?

A

Specific excretion

Catabolism

20
Q

What two component system regulates porin synthesis?

A

EnvZ-OmpR