Haploid Mapping Flashcards

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1
Q

Linkage Mapping in haploids

A
  • no dominance/recessive relationships (genotype = phenotype)
  • high numbers of progeny, very closely linked genes
  • direct analysis of meiotic products, double crossovers between genes
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2
Q

Allele segregation w/p cross over

A
  • 4 spores with the A phenotype
  • 4 spores with the a phenotype

-The A and a alleles segregate during the 1st meiotic division

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3
Q

Allele segregation w/ cross over

A

-2 spores with the A phenotype
-2 spores with the a the phenotype
-2 spores with the A phenotype
2-spores with the a phenotype

-The A and a alleles did not fully segregate until the 2nd meiotic division

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4
Q

FDS

A
  • first division segregation
  • phenotypic arrangement of spores, 4:4
  • indicates no cross-over between gene and centromere
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5
Q

SDS

A
  • second division segregation
  • -phenotypic arrangement of spores, 2:2:2:2
  • indicates single cross-over between gene and centromere
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6
Q

a +
a +
+ a
+ a

A

FDS

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7
Q

a + a +
+ a + a
+ + a a
a a + +

A

SDS

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8
Q

Calculating m.u. between locus and its centromere

A

1/2(SDS)/(total) * 100

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9
Q

AB
AB
ab
ab

A

PD, parental ditype

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10
Q

AB
Ab
aB
ab

A

TT, tetratype

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11
Q

Ab
Ab
aB
aB

A

NPD, nonparental ditype

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12
Q

Assumption:

A
  • all double CO events

- are equal frequency

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13
Q

m.u. between two genes formula

A

[0.5TT + 3NPD]/total asci * 100 = m.u.

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14
Q

Genes are linked

A

NPD «< PD

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15
Q

Genes are unlinked

A

NPD = PD

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16
Q

Steps to Haploid Mapping

A
  1. Identify each ascus as PD, TT or NPD
  2. Determine if the genes are linked or unlinked
  3. Identify SDS ascis for one gene
  4. Identify SDS asci for second gene
  5. Calculate distances of each to centromere
  6. If unlinked, done
  7. If linked, calculate distance between genes
  8. Draw map with centromere