Diploid Mapping Flashcards
Unlinked genes
50% recombinants
Linked genes
< 50% recombinants
What percentage of recombinants would occur if there were never a crossover?
0%
What percentage of recombinants would occur if there were always a crossover?
50%
Thomas Hunt Morgan’s Theory of Crossovers
If there exists a small but equal probability for a crossover event at any given unit of chromosome distance, then crossover frequency between genes should be a function of their distance
- i.e, the relative distance between genes could be determined by crossover frequency and all the genes on a chromosome could be mapped
- 1% recombinants = 1 map unit (mu)
Genes A/a, B/b and D/d are linked
P AABB x aabb
F1 AaBb testcrossed to aabb
AaBb 47%
aabb 47%
Aabb 3%
aaBb 3%
6% recombinants (6 map units)
P AADD x aadd
F1 AaDd testcrossed to aadd
AaDd 40%
aadd 40%
Aadd 10%
aaDd 10%
20% recombinants
Three-point testcross
Testcross a trihybrid and produce enough progeny to map all three genes in one cross
Double recombinants
-Always the lowest frequencies
Parentals
-Always the highest frequencies
Determining gene order
- Look at double recombinants and parentals genotypes only
- gene that switches position between d.r. and parentals (not the two that always stay together) is the one in the middle
Determining distance
(look at notes. but basically, take middle gene and keep one, move other gene downwards. The one you move downwards is the one you are determining distance from middle gene. Then find out the frequency for the middle and upper, add lower and then add the double recombinant frequencies, divide all over total amount) for determining distance between two ends, add middle + 1 plus muddle + other end
Coefficient of coincidence
Multiply middle + left and middle + right, then multiply that by total amount of progeny to determine expected amount of double recombinants
Then divide observed (double recombinants added up together) by expected amount. Multiply by 100 to determine percentage
Interference
1 - coefficient of coincidence
Unlinked
50% recombinants on separate chromosomes
-more than 50 map units apart on same chromosome