Haem Flashcards
What is the typical demographic of patients with CLL and incidence?
• CLL is predominantly identified in older patients with a median diagnosis of 74
• Chronic lymphocytic leukaemia (CLL) is the most common leukaemia with 4.9/100,000 incidence in the UK and USA.
What tests are indicated in the initial diagnosis of a ?CLL case
o High number of lymphocytes in peripheral blood
o Clonality demonstrated by flow cytometry
o Genetic testing using FISH, karyotype or NGS for chromosomal abnormalities, NGS panel recommended for molecular abnormalities
o Karyotype required to rule out lymphomas.
What are the actionable chromosomal abnormalities in CLL and what is the associated prognosis?
o Deletions of 13q14.3 (RB1 & DLEU2/7) is the most common chromosomal alteration and is associated with a good prognosis in the absence of other genetic markers.
o Deletions of 17p (TP53) and TP53 mutations are associated with a poor prognosis and resistance to DNA damaging agents (chemo and immune therapy)
o Deletions of 11q (ATM) is associated with a poot prognosis
o Trisomy 12 is associated with an intermediate prognosis
o Complex karyotype is associated with a poor prognosis
Variants in what genes are linked with resistance to ibrutinab and venetoclax in CLL?
o Mutations in BTK and PLCG2 are acquired resistance mutations to BTK inhibitor therapy
o Mutations in BCL2 are acquired resistance mutations to venetoclax monotherapy
What is the initial treatment of CLL and when is further actions indicated?
Initially the majority of patients are monitored with a ‘watch and wait’ approach and treatment initiated with onset of symptoms or disease progression.
What are the significance of IGHV mutation status in CLL?
o Ig gene (heavy and light) rearrangements can be used to categorise patients into two groups IGHV mutated and IGHV unmutated. IGHV unmutated is associated with a poor prognosis
What are the genetic abnormalities associated with therapeutic targets in CLL and with which drugs are they linked?
o Treatment dependant on genetic changes detected alongside any co-morbidities.
o Ibrutinib (BTK inhibitor) inhibits the BTK kinase domain and is used in patient with TP53/del(17p) changes which cause resistance to chemo or immune therapy.
o Venetoclax monotherapy is used in refectory disease patients who have stopped responding to ibrutinib or in patients with TP53/del(17p) who are not suitable for treatment with ibrutinib.
What technique is used to monitor CLL?
o Carried out using flow cytometry
What are the three phases of CML and associated blast count?
• There are three phases: chronic phase (blast <10%), accelerated phase (blasts10-19%) and blast crisis (blasts >20%).
What are the clinical features CML patients may present with?
• 50% of patients present with no symptoms but symptoms can include splenomegaly, weight loss, fatigue and night sweats.
What high level group of disorders is CML part of?
• Chronic myeloid leukaemia is a clonal myeloproliferative disorder and belongs to the group of myeloprolifertive neoplasms (MPN)
What is the typical demographic for CML cases?
• CML incidence is linked with age, with the highest incidence being in older people with almost a quarter being 75 yrs and older.
What is the hallmark genetic alteration in CML?
• The hallmark genetic change of CML is the reciprocal translocation t(9;22)(q34;q11.2) which cause the fusion of the BCR and ABL1 genes (BCR-ABL1)
What are the three main BCR-ABL1 alterations and associated transcript names found in CML?
- BCR Exon 13 – ABL1 exon 2 e13a2 (b2a2) (Major)
- BCR Exon 14 – ABL1 exon 2 e14a2 (b3a2) (Major)
- BCR Exon 1 – ABL exon 2 e1a2 (Minor)
What are the first line and second line tyrosine kinase inhibitors used in the treatment of BCR-ABL1 positive CML patients?
• Imatinib was the first TKI to be approved for treatment of CML and is typically still first line
• Dasatinib and Nilotinib are second generation TKI’s which initiate a stronger initial response by have overall comparable outcomes to Imatinib.
How is residual disease monitored in CML and the associated response levels?
Response to treatment is monitored through analysis of the levels of the BCR-ABL1 transcript
Major molecular response (MMR or MR3) corresponds to <0.1% BCR-ABL1 on the IS,
MR4 is <0.01% BCR-ABL1 or undetectable with >10,000 ABL1 transcripts,
MR 4.5 is <0.0032% or undetectable with >32,000 ABL1 transcripts
Why can TKI treatment fail in CML?
Treatment can fail for a number of reasons including patients not complying with therapy (most common), acquired resistance mutations in the tyrosine kinase domain of BCR-ABL1 and pharmacokinetic interactions such as accelerated TKI metabolism.
What is the most common resistance mutation in TKI treated CML patients and what are the treatment implications?
The most common resistance variant is the ABL1 T315I mutation. This mutation cannot be treated with imatinib, dasatinib or nilotinib. There is only one TKI which can currently treat these patients; ponatinib
What are the recommended genetic biomarkers which can be used for MRD analysis in AML?
Mutated NPM1 *
RUNX1-RUNX1T1 *
PML-RARA (APL)
CBFB-MYH11 *
KMT2A-MLLT3
*Most robust markers
What targeted treatment is available for AML and with which genetic aberration is it associated?
Midostaurin is recommended by NICE for the treatment of newly diagnosed FLT3-mutation positive AML. Midostaurin is a multi target kinase inhibitor
According to the Europen LeukaemiaNet guidance (2022), which genetic abnormalities in AML are associated with a poor prognosis?
t(6;9)(q23;q34.1) DEK-NUP214
t(v;11q23.3) KMT2A rearranged
t(9;22)(q34.1;q11.2) BCR-ABL1
t(8;16)(p11;p13) KAT6A-CREBBP
inv(3)(q21.3;q26.2) or t(3;3)(q21.3;q26.2) GATA2, MECOM
t(3126.2;v) MECOM rearranged
-5 or del(5q)
-7
-17/abn(17p) (TP53)
- Complex or monosomal karyotype
- Mutated ASXL1, BCOR, EZH2, RUNX2, SF3B1, SRSF2, STAG2, U2AF1 or ZRSR2
- Mutated TP53 (at least 10% VAF)
According to the European LeukaemiaNet (2022) guidance, what genetic abnormalities are associated with an intermediate prognosis in AML?
Mutated NPM1 with FLT3-ITD
Wild type NPM1 with FLT3-ITD
t(9;11)(q21.3;q23.3) - MLLT3-KMT2A
Cytogenetic abnormalities not classified as favourable or adverse
According to the European LeukaemiaNet AML guidance (2022), which genetic abnormalities are associated with a favourable prognosis?
t(8;21)(q22.1;q22) - RUNX1-RUNX1T1
inv(16)(q13;q22) or t(16;16)(q13;q22) CBFB-MYH11
NPM1 mutated with no FLT3-ITD
Biallelic mutated CEBPA or bZIP in-frame mutated CEBPA
What are the 11 AML subtypes as classified by WHO
- AML with t(8;21)(q22;q22.1) RUNX1-RUNX1T1
- AML with inv(16)(p13.1;q22) or t(16;16)(p13.1;q22) CBFB-MYH11
- Acute promyelocytic leukaemia with t(15;17) (q24;q21) PML-RARA
- AML with t(9;11)(p21.3;q23.3) KMT2A-MLLT3
- AML with t(6;9)(p23;q34.1) DEK-NUP214
- AML with inv(3)(q21.3;q26.2) or t(3;3;)(q21.3;q26.2) GATA2, MECOM
- AML (megakaryoblastic) with t(1;2)(p13..3;q13.1) RBM15-MKL1
- Provision entity - AML with BCR-ABL1 t(9;22)(q34;q11)
- Provision Entity - AML with mutated NPM1
- Provision entity - AML with biallelic CEBPA
- Provisional entity - AML with mutated RUNX1
Diagnosis and classification of AML requires a multidisciplinary diagnostic approach . What forms of testing are required?
Cytomorphology
Immunophenotyping
Cytogenetics
molecular Genetics
By what mechanisms can AML occur?
AML can arise de novo or can be secondary to underlying myeloproliferative neoplasms or myelodysplastic syndromes.
What is the demographic of AML and what is incidence linked to?
AML can occur at any age but is more prevalent later in life with the incidence increasing in correlation with age.
What cell types can be involved in Non-Hodgkin Lymphomas?
B-lymphocytes, T-lymphocytes and Natural Killer cells (rare)
What are some symptoms of Non-Hodgkin Lymphomas?
Fever, night sweats, unintentional weight loss, swelling in lymph nodes, fatigue, loss of appetite.
What proportion of Non-HodgkinLymphoma does Diffuse B-cell lymphoma account for and what is the prognosis?
Diffuse B cell lymphoma accounts for 30-40% of Non-Hodgkin lymphoma cases and has an aggressive phenotype
What proportion of Diffuse large B-cell lymphoma have an MYC rearrangement?
10-15%
What is required for a diagnosis of High grade B-cell lyphoma?
Patients will have an MYC rearrangement with a BCL2 rearrangement and/or BCL6 rearrangement
What are the most common MYC rearrangements seen in Diffuse large B-cell lymphoma and Burkitts lymphoma?
t(8;14)(q34;q32) IGH-MYC rearrangement in 80% of cases
t(8;22)(q24;q11) IGK-MYC and t(2;8)(p12;q24) IGL-MYC account for other 20%
What proportion of Diffuse large B-cell lymphoma is high grade and what is the prognosis?
8-10%, more aggressive disease and worse prognosis after treatment with R-CHOP.
Follicular lymphoma accounts for what proportion of Non-Hidgkin lymphoma and what is the prognosis?
22% and is indolent
What rearrangement is identified in 90% of follicular lymphomas?
t(14;18)(q32;q21) IGH-BCL2
What characterises follicular lymphoma with a diffuse pattern?
Deletion of 1p36 and a lack of t(14;18)(q32;q21)
What rearrangement is seen most frequently in mantle cell lymphoma?
t(11;14)(q13;q32) IGH-CCND1
What proportion of Non-Hodgkin lymphoma cases are mantle cell and what is the prognosis
2%, aggressive disease