Genetics of Common Diseases II Flashcards
linkage disequilibrium
the nonrandom association between alleles at different loci.
it is created by drift, selection and recombiation.
loci that are physically _ together exhibit stronger LD than loci that are farther apart on a chromosome.
closer
first successful GWA study
age - related macular degeneration
key feature of AMD
formation of extracellular deposits called drusen concentrated in and around the macula.
odds ratio
a comparison of the odds that individuals who share a particular factor will have a disease or trait versus the odds for individuals who lack the factor.
relative risk
a comparison of the risk for a disease in individuals who share a particular factor will have a disease or trait versus the risk among for individuals who lack the factor.
GWA and IBD
the genetic risk loci for IBD identified only explain a small part of the genetic variance in disease risk.
if a gene product is so deficient or dysfunctional that it causes a severe phenotype
disease is generally rare
will nearly always have an early onset
difficult to treat or even manage
if an altered gene product can still carry out its functions, the resulting disease will be more _
frequent.
the disease will also have a later onset and will be more amenable to treatment.
• General rule: rare variants in _, common variants in _.
• General rule: rare variants in protein coding, common variants in regulatory sequences