Genetics Flashcards
What is the most comom major congenital malformation in the US
neural tube defects
Where are most port wine stains nevus flammeus), located?
85% are unilateral and msot are present on the head and neck
What are the major criteria for the diagnosis of CHARGE to be considered?
coloboma, atresia of the choanea, cranial nerve dysfunction, and characteristic ear anomalies (hypoplastic lobule, prominent antihelix, triangular cocncha)
What is the most common autosomal trisomy found in live newborns?
T21
What tests need to be done on an infant with T21 before being discharged from the hospital?
CBC.to assess for leukomaoif reaction or transient myeloproliferative disorder; thyroid function tests to eval for hypothyroid, hearing screen, red reflex to assess for cataract formation; GI contrast studies in infants with bilious emesis to rule out duodenal atresia
Give example of microdeletion syndromes
DiGeorge, PWS
Give example of missense mutation
Sickle cell anemia (new nucleotide changes the codon and the amino acid profile is changed; in SS, replacement of A by T at the 17th necleotide of the gene for the beta hemoglobin chain change the codon GAG (glutamic acid) to GTG (valine)
Give example of nonsense mutation
CF; new nucleotide changed the codon to a stop codon which stops the translation of messenger RNA; the earlier this happens the more dysfunctional the protein
This is a type of translocation where the the long arms of 2 different chromosomes fuse at the centromere and the very small short arms are lost; only involves chromosomes 13,14,15,21, and 22
Robertsonian translocation; normal phenotype; most common type is between chromosome 21 and 14 which is responsible for 3-5% of T21
What is the most common single gene disorder in the Caucasian population?
Cystic fibrosis
List examples of single gene disorders that are autosomal recessive
Cystic fibrosis, majority of inborn errors of metabolism; alpha and beta thalassemia, sickle cell disease, 21 hydroxylase defiency, congenital muscular dystrophy
Lis the 9 syndromes that result from imprinting
PWS, Angelman, Beckwith-Weideman, Russell-Silver, maternal hypomyelination syndromes, maternal and paternal uniparental disomy of chromosome 14, pseudohypoparathyroidism type 1b, transietn neonatal diabetes
What are two examples if single gene disorders with autosomal dominant inheritanace?
spherocytosis, Waarderburg syndrome (these disorders are commonly recognzed as disorders with this inheritance)
What are some examples of single gene disorders with x-linked recessive inheritance ?
glucose-6-phosphate dehydrogenase deficiency, Wiskott-Aldrich syndrome, hemophilia A and B (these are commonly recognized disorders with this type of inheritance)
Female infant born at 36 weeks for fetal intolerance to labor and maternal exhaustion. IOL for IUGR. Decreased fetal movement during pregnancy. On exam, infatn holds the BUE and BLE in flexion. Complete extension of the elbows, hips, and knees is impossible. Normal DTR. Infant has a weak cry and cannot lift his head with horizonal suspension. Post-natally, you notice mother with few facial expressions, drooping eyelids, and difficulty releasing your hand after a handshake. What is the pathogenesis for arthrogryposis in the neonate?
congenital myotonic dystrophy secondary to a trinucleotide expansion (CTG repeat) resulting in altered RNA binding proteins; this disease has autosomal dominant inheritance
What are some disorders a/w advanced paternal age?
achondroplasia, Apert syndrome, Marfan syndrome, Treacher Collins syndrome, osteogenesis imperfecta, Waardenburg syndrome
One or more fingers is permanently bent (Camptodactyly); thick lips, deep set eyes, prominent cupped ears,
trisomy 8; most that survive are mosaic since comlete trisomy 8 is lethal
cleft lif and palate, midline abnormalities, cutis aplasia, narrow convext fingernails, holoprosencephaly, seizures with hypsarrhythmia, persistent of fetal hemoglobin; triple screen not helpful
trisomy 13, extra chromosome from maternal origin, 95% of trisomy 13 conceptons lead to spontaneous abortions;
females> males; VSD, PDA, clenched hands, overlapping of 2nd finger over 3rd or 5th finger over 4th; rocker bottom feet, small mouth / micrognathia (may be a/w Peirre Robin), short sternum; triple screen with low beta-hCG, low estriol, low AFP,
trisomy 18; > 95% with complete trisomy 18, with extra copy of maternal origin in ~90%
1 in 800 live births; 5th finger with hypoplastic middle phalynx, 5th finger clinodactyly, hyperflexicle joints, upslanting palpebral fissures, flat facies, Brushfield spots (speckled iris), epicanthal folds, infertility in both males and females, hypotonia
T21; 94% with complete trisomy, ~3-5% with Robertsonian translocation, 2% mosaicism; increased risk in older females due to increased risk of non-dusjunction with age
What are some increased risks in patients ith T21
increased risk of immunolgic dysfunction, leukemia (15-20x compared to general pop), Alzheimer’s
hyertelorism, downward slant of palpebral fissures, severe mental deficiency, cat-like cry, 2/2 abnormal laryngeal development, FTT microcephaly, hypotonia, VSD, PDA, TOF
Cru di chat; partial deleiton of the short arm of 5th chromosome (deleted portion is of paternal origin in 80% of de novo events) majority are de novo
thumb hypoplasia, colobomas, increased risk of retinoblastoma, microcephaly, high nasal bridge, 5th finger clinodatyly
deletion 13q
puppet- like gait, blonde hair color, decreased iris pigment, wide spaced teeth, large mouth, seizures
Angelman sydrome; 70% result fro 15q11-13 deletion, <5% uniparental disomy, 20-30% occur because of point mutations or other abnormality of maternal 15 q 11-13 region; deleted piece is always of maternal origin
most common chrosomsal deletion in humans
Digeorge; occur in 1 in 4000; autosomal dominant with variable expession
secondary to defect in 4th brachial arch and derivatives of 3rd and 4th pharyngeal pouches; aortic arch abnormalities; hypoplastic to aplastic thymus, hypocalcemia, deficient celluar immunity, developmental delay, cleft palate
DiGeorge,, majority with 22q11.2 deletion
small hands and feet, undescended testes, FTT initially but then obesity, breech presentation at delivery, almond shaped palpbral fissures
PWS, ~70% with deletion of 15 q 11-13, ~25% result from maternal uniparental disomy, ~5% result from methylation at several loci within 15 q 11-13; deleted piece is always of paternal origin
broad thumbs, downward slanting palpebral fissures, prominent and/or beaked nose, hypoplastic maxilla, broad toes, hirsuitism, 25% with cardiac anomalies (PDA, VSD, ASD); due to deletion of 16p13.3 which encodes for cAMP-regulated enhancer-binding protein (CREB)
Rubenstein-Taybi syndrome; majority are sporadic
Wilms tumor, aniridia, GU abnormalities, moderate to severe mental deficiency, congenital cataracts,
WAGR syndrome, due to 11p13 deletion, usually de novo
supravalvular aortic stenosis> peripheral pulmonic stenosis, hypoplastic nails, prominent lips, hoarse voice, stellate iris pattern, mental deficiency
Williams syndrome, 11q13 deletion leading to deletuon of elastin gene, majority sporadic
diandric triploidy (69, XYY) is a/w with what 3rd trimester US finding?
placentomegaly with the placenta resembling a a hydadidiform mole; fetuses have mild growth restriction and noro-microcephaly
Digynic triploidy (69 XXY( is associated with what findings prenatally
small placenta, severe growth restriction, relative macrocephaly
trident hands (Separation between middle and ring fingers), short limbs, depressed nasal bridge, megalocephaly, caudal narrowing of the spinal cord, normal intelligence; autosomal dominant, 80-90% result from new mutations, increased risk with paternal age
achondroplasia; secondary to a mutation in the transmembrane domain of the FGF receptor 3 gene (at 4p16.3 locus)
hypertelorism, midfacial hypoplasia, broad distal phalanx of thumb and big toe, syndactyly, irregular craniosynostosis; autosomal dominant, majority sporadic,
Apert Syndrome= acrocephalosyndactyly, due to mutation in the the FGF receptor 2 gene
maxillary hypoplasia, shallow orbits, premature craniosynostosis (especially coronal, lambdoid, sagittal sutures), mental deficiency less common, autosomal dominant with variable expression
Crouzon syndrome (craniofacial dyostsis, due to diferent mutation I the FGF2 receptor gene than Apert’s syndrme
polyhyramnios, large tongue, linear earlobe fissures, macrosomia, organ hypoplasia, fetal adrenocortical cytomegaly, intra-abdominal malignancies (Wilms tumor and hepatoblastoma), hypoglycemia
Beckwith-Wiedemann syndrome; autosomal dominant with variable expression and incomplete penetrance with gene located at 11p15.5
ASD (most common, but can have VSD or Coractation), upper limb defects; absent, hypoplastic or abnormally shaped shaped thumbs, narrow shoulders, decrease rangeo of motion of upper extremities
Holt-Oram, Autosomal dominant with varible expression, some cases a/w 12q2 locus
dilated aorta, arachnodactyly, hyperextensibility, scoliosis, lens subluxation (usually upward),
Marfan syndrome, autosomal dominant with varianle expression
ASD (most common, but can have VSD or Coractation), upper limb defects; absent, hypoplastic or abnormally shaped shaped thumbs, narrow shoulders, decrease rangeo of motion of upper extremities
Neonatal Marfan’s syndrome, results from diferent mutation in fibrillin gene from Marfan’s syndrome that presents later in life
What is the treatment for Marfan’s?
beta blocker to prevent aortic dilatation
dysplastic pulmonary valve, webbed neck, cryptorchidishm, short stature abnormalities in the coagulation pathway,
Noonan syndrome, autosomal dominant with wide varianble expression, abnormalities mapped to the 12q22 region
defect in type 1 collagen (COLA1 gene), blue sclera, increased risk of fractures (8% noted at birth, 25% noted in first year of life), easy bruisability, deafnes, postnatal growth deficiency, abnormal dentition, wormian bones in cranial sutures
osteogenesis imperfecta (type 1); autosomal dominant
blue sclera, increased risk of fractures, short and broad long bones, patients are usually still born or die early in infancy 2/2 resp failure,
osteogenesis imperfecta (type 2); defect in type 1 collagen (COLA1 gene), autosomal dominant
blue sclera in infancy that normalizes as an adult, increased risk of fractures (usually present at birth), IUGR, macrocephaly, abnorml dentition, deafness, kyphoscoliosis, short stature
osteogenesis imperfecta type 3; defect in type 1 collagen (COLA1 gene), autosomal dominant
normal sclera, increased risk of bone deformities, may have abnormal dentition
osteogenesis imperfecta type 4; defect in type 1 collagen (COLA1 gene), autosomal dominant
aka hereditary arthro-opthalmopathy, flat facies, myopia, spondyloepiphyseal dysplasia (flat vertebrae with anterior wedging, poorly developed distl tibial epiphyses, flat femoral epiphyses, mitral valve prolapse, can be a/w Pierre Robin sequence
Stickler syndromel autosomal dominant , 2/2 mutation in the COL2A gene (type 2 collagen gene), located at 12q13.1-q13.2 locus
large cranium, short limbs, low nasal bridge, flat vertebral bodies, curved long bones
type 1, thanatophoric dysplasia, more common, autosomal dominant, 2/2 new mutation in the tyrosine kinase domain of FGF receptor 3 gene (at 4p16.3 locus)
large cranium, short limbs, low nasal bridge, flat vertebral bodies, straight femoral bones, taller vertbebral bodies, cloverlea skull
type 2 thanatophoric dysplasia autosomal dominant, 2/2 new mutation in the tyrosine kinase domain of FGF receptor 3 gene (at 4p16.3 locus)
lower eyelid coloboma downslanting palpebral fissures, mandibular hypoplasia, malformed ears, malar hypoplasia, dysmorphic ears, aka mandibulr facial dysostosis, 40% with conductive hearing loss, 40% with visual loss, normal intelligence
Treacher Collins, 60% due to new mutations, autosomal dominant, 2/2 mutation in the TCOF 1 gene that leads to 1st and 2nd brachial arch maldevelopment
white forlock, partial albinoism, deafness (more severe ins type 2 form),
Waardenburg syndrome, autosomal dominant (Type 1 due to mutation in the PAX 3 gene); 4 different types,
polydactyly, lateral displacemnet of inner canthus, brachycephaly; 50% with cardiac anomalies (VSD, PDA, ASD, PS, TOF, TGA)
Carpenter syndrome, auto recessive
short distal extremities, polydactyly (fingers more than toes), nail hypoplasia, narrow thorax, 50% with cardiac anomalies (single atrium, ASD)
Ellis- van Creveld syndrome ; autosomal recessive, aka chrondoectodermal dysplasia
hyperpigmentation (increases with age, esp involving groin, axilla, trunk), radial hypoplasia, thumb hypoplasia, short stature, pancytopenia (presents at ~7 years but may occur during infancy)
Fanconi pancytopenia syndrome, auto recessive, increased number of chromosomal breaks in lymphocytes and amniotic fluid cells
What is the prognosis of patients with Fanconi pancytopenia
~35% mortality 2/2 hematologic anomaiies, increased risk of AML
encephalocoele, microphthalmia, cleft palate, micrognathia, ear anomalies, polydactyly, cystic dysplastic kidneys
Meckel-Gruber syndrome, auto recessive, locus mapped to 17q21-q24
encepalocoele, facial disruptions cleft lip/palate, amputations of digits or limbs
amniotic band syndrome
encephalocoele, hypertelorism, widely set nostrils, anterior cranium bifidum occultum
frontonasal dysplasia
eye abnormalities (microphthalmia, cataracts), CNS anomalies (ventriculomegaly, midline abnormalities, lissencephaly)
Walker-Warburg syndrome