GENETICS Flashcards

1
Q

Myotonic muscle dystrophy

A

Myotonic dystrophy is characterized by progressive muscle wasting and weakness. People with this disorder often have prolonged muscle contractions (myotonia) and are not able to relax certain muscles after use.

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2
Q

Symptoms of myotonic muscle dystrophy

A

-muscle weakness,
- muscle spasm
which will affect their mobility.
-They will have an increased risk of getting
diabetes which might be difficult to
treat.
-They will have heart
problems. (abnormalities of the electrical signals that control the heartbeat (cardiac conduction defects))
-They will have cataracts.
-They will have an increased risk to
sometimes tumours

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3
Q

What causes duchenne muscular dystrophy

A

DMD is caused by an absence of dystrophin, a protein that helps keep muscle cells intact.

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4
Q

What is TRISOMY 21

A

downsydrome

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5
Q

Types of Translocations

A

Reciprocal

robertsonian

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6
Q

What is reciprocal translocation?

A

When a part of two chromosomes switches over

-As long as balanced = usually no harmful affects bc got the correct amount of info

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7
Q

What is robertsonian transloacation?

A

When one chromosome attached to another so looks like 45 present

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8
Q

A v common deletion syndrome

A

Chromosome 22q11 deletion syndrome

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9
Q

Other names of 22q11 syndrome

A

Digeorge syndrome

Velocardialfacial syndrome

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10
Q

Features of 22q11 Deletion Syndrome

A
Characteristic facial features (?)
Congenital heart disease (≈74%)
Palatal abnormalities	 (≈69%)	
Learning difficulties (≈70-90%)
Psychiatric problems (?)
Immunodeficiency (≈	77%)
Hypocalcaemia (≈50%)
Renal abnormalities (≈37%)
Approx. 90% de novo, 10% inherited
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11
Q

Mendel’s 3 laws of genetics

A
  • Segregation
  • Dominance
  • Independant assortment
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12
Q

Allelic heterogeneity

A

where different mutations within the same gene result in the same clinical condition e.g. cystic fibrosis. Thus an individual with an autosomal recessive condition may be a compound heterozygote for two different mutations

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13
Q

Features of Autosomal Recessive Inheritance

A

Male and females affected in equal proportions
Affected individuals only in a single generation
Parents can be related, i.e. consanguineous

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14
Q

Most common Autosomal recessive condition

A

Cystic fibrosis

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15
Q

Diagnostic test for cystic fibrosis

A

Sweat testing (not genetic analysis)- looks for increased Chloride ions in sweat

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16
Q

Cystic fibrosis can be cvaused by over 1000 mutations this is called

A

Mutational heterogeneity

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17
Q

What is cystic fibrosis

A

inherited condition that causes sticky mucus to build up in the lungs and digestive system. This causes lung infections and problems with digesting food.

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18
Q

Symptoms of cystic fibrosis

A

recurring chest infections
wheezing, coughing, shortness of breath and damage to the airways (bronchiectasis)
difficulty putting on weight and growing
jaundice
diarrhoea, constipation, or large, smelly poo
a bowel obstruction in newborn babies (meconium ileus) – surgery may be needed

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19
Q

Why does cystic fibrosis cause so many problems

A

The build-up of sticky mucus in the lungs can cause breathing problems and increases the risk of lung infections. Over time, the lungs may stop working properly.

Mucus also clogs the pancreas (the organ that helps with digestion), which stops enzymes reaching food in the gut and helping with digestion.

This means most people with cystic fibrosis don’t absorb nutrients from food properly and need to eat more calories to avoid malnutrition.

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20
Q

Genotype - phenotype correlations in cystic fibrosis EXample

A

If have F508 mutation in both alleles then =
pancreatic insufficiency and chronic lung disease

If have F508 in one allele and R117H in other = majority are pancreatic sufficient but have chronic lung disease - Milder symptoms

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21
Q

Consanguinity meaning

A

Reproductive union between two relatives.

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22
Q

Autozygosity

A

Homozygosity by descent, i.e. inheritance of the same altered allele through two branches of the same family.

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23
Q

Typical features of autosomal dominant inheritance

A

Male and females affected in equal proportions
Affected individuals in multiple generations
Transmission by individuals of both sexes, to both sexes
But don’t forget penetrance & variability!

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24
Q

Pentrance meaning

A

The percentage of individuals with a specific genotype showing the expected phenotype

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25
Q

Expressivity

A

Refers to the range of phenotypes expressed by a specific genotype

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26
Q

Meaning of de novo mutation and example of disease caused by this

A

New mutation

  • Example – Neurofibromatosis type 1, up to 50% of cases occur as result of de novo mutation
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27
Q

What is neurofibromatosis

A

genetic condition that causes tumours to grow along your nerves. The tumours are usually non-cancerous (benign) but may cause a range of symptoms.

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28
Q

Symptoms of neurofibromatosis

A

pale, coffee-coloured patches (café au lait spots)
soft, non-cancerous tumours on or under the skin (neurofibromas)
clusters of freckles in unusual places – such as the armpits, groin and under the breast
problems with the bones, eyes and nervous system

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29
Q

Anticipation meaning and example of disease

A

Whereby genetic disorder affects successive generations earlier or more severely, usually due to expansion of unstable triplet repeat sequences
Example Myotonic dystrophy

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30
Q

Somatic Mosaicism

A

Genetic fault present in only some tissues in body

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31
Q

Gonadal (germline) Mosaicism

A

Genetic fault present in gonadal tissue

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32
Q

Late-onset

A

Condition not manifest at birth (congenital), classically adult-onset
Example – Hypertrophic Cardiomyopathy

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33
Q

Sex-limited

A

Condition inherited in AD pattern that seems to affect one sex more than another
Example – BRCA1/2

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34
Q

Predictive testing

A

Testing for a condition in a pre-symptomatic individual to predict their chance of developing condition

35
Q

Lyonization (X-inactivation)

A

Generally only one of two X chromosomes active in each female cell. Can be skewed

36
Q

Genomic imprinting

A

is an epigenetic phenomenon that causes genes to be expressed in a parent-of-origin-specific manner

37
Q

Homoplasmy

A

a eukaryotic cell whose copies of mitochondrial DNA are all identical (identically normal or have identical mutations)

38
Q

Why do syndormes like prader-willi or angelmans arise?

A

Activity of the gene is parent dependent but that gene is switched off (usually both genes active and working )

39
Q

Heteroplasmy

A

there are multiple copies of mtDNA in each cell
the name given to denote mutations which affect only a proportion of the molecules in a cell
the level of heteroplasmy can vary between cells in the same tissue or organ, from organ to organ within the same person, and between individuals in the same family

40
Q

Carrier testing for what?

A

Autosomal recessive diseases

41
Q

Predictive testing for what ?

A

Late onset diseases

42
Q

Whats Sanger sequencing

A

Developed by Frederick Sanger
in 1977
Uses PCR to amplify regions of interest followed by sequencing of products
Useful for single gene testing

43
Q

Next generation sequencing

A

High throughput or massively parallel sequencing
Can sequence whole human genome in one day
Multi-gene panels, whole exome/genomes

44
Q

Pyloric stenosis

A

Pyloric stenosis is a condition where the passage (pylorus) between the stomach and small bowel (duodenum) becomes narrower.

45
Q

Characteristics of multifactorial inheritance and example

A

If the condition is more common in one particular sex, then relatives of an affected individual of the less frequently affected sex will be at higher risk than relatives of an affected individual of the more frequently affected sex.

46
Q

The Liability model explain

A

The factors that influence the development of a multifactorial disorder, genetic and environmental can be considered as a single entity known as liability
the liabilities of all individuals form a continuous variable which has a normal distribution
the curve for relatives is shifted to the right compared to the general population
the closer the relationship the greater the shift to the right
a threshold exists above which the abnormal phenotype is expressed
in the general population the proportion beyond the threshold is the population incidence and among relatives is the familial incidence

47
Q

GWAS – Genome wide association studies

A

Utilises the fact that a gene can have several variants –alleles

compare the frequency of markers in a sample of patients and a sample of healthy controls. Can use candidate genes or nowadays try to aim for complete coverage of the genome
Look for markers e.g. a SNP that is seen more frequently in the disease population
Sequence that area to try to identify the gene and the particular allele that is associated with the increased likelihood of developing the condition

48
Q

Is gene variation always pathogenic?

A

Some variations in a gene cause that gene to be inactivated or behave abnormally – pathogenic
Most genetic variation still results in a functioning gene – polymorphisms
Different types of polymorphisms – e.g. SNPs (single nucleotide polymorphisms), differing lengths of a CA repeat.

49
Q

Anabolic

A

synthesise larger molecules from smaller components
Eg storage
biosynthetic

50
Q

Catabolic

A

break down larger into smaller

Oxidative

51
Q

How is carb stored

A

as glycogen in liver and muscles

52
Q

how is protein stored

A

Muscle

53
Q

How is fat stored

A

As adipose tissue

54
Q

Basal Metabolic Rate (BMR)

A

A measure of the energy required to maintain non-exercise bodily functions such as;

respiration, 
contraction of the heart muscle, 
biosynthetic processes,  
repairing & regenerating tissues,
ion gradients across cell membranes.

Approximately 1kcal/kg body mass/hour

essentially Energy needed to stay alive at rest

55
Q

Conditions essential for measuring BMR

A

Post-absorptive (12 hour fast)
• Lying still at physical and mental rest
• Thermo-neutral environment (27 – 29oC)
• No tea/coffee/nicotine/alcohol in previous 12 hours
• No heavy physical activity previous day
• Gases must be calibrated
• Establish steady-state (~ 30 minutes)

  • If any of the above conditions are not met, then = Resting Energy Expenditure (REE)
56
Q

Factors affecting BMR if decreasing

A
Decreasing BMR
Age
Gender
Dieting/Starvation
Hypothyroidism
Decreased muscle mass
Drugs
57
Q

Factors affecting increasing BMR

A
Increasing BMR
Body weight (BMI)
Hyperthyroidism
Low ambient temp.
Fever/infection/chronic disease
Caffeine/stimulant intake
Exercise
Pregnancy & lactation
58
Q

What is refeeding syndrome?

A

is a serious potential complication of commencing feeding in children and young people who have experienced starvation.

59
Q

What does refeeding syndrome cause? `

A

Re-distribution of phosphate, potassium, magnesium etc due to insulin,
- Can be fatal

Switch back to carbohydrates as the main fuel which requires phosphate and thiamine.
- Therefore thiamine sometimes given before feeding

60
Q

What is Malnutrition

A

A state of nutrition with a
deficiency, excess or imbalance of
energy, protein or other nutrients,
causing measurable adverse effects

61
Q

There are two main types of polyunsaturated fats:

A

omega-3 and omega-6.

62
Q

Why should we eat fish oil

A

Some types of omega-3 and omega-6 fats cannot be made by the body and are therefore essential in small amounts in the diet, mainly in plant and fish oils.

63
Q

Why do we need vitamin C and where do we get it from?

A
  • Ascorbic acid
  • Fruit and vegetables
  • Heat labile
  • Collagen synthesis
  • Improve iron absorption
  • Antioxidant
64
Q

Why do we need vitamin B12 and where do we get it from?

Cobalamin

A
Protein synthesis
DNA synthesis
Regenerate folate
(and therefore – cell division)
Fatty acid synthesis
Energy production

Works with the vitamin folate to make DNA.
Helps to make healthy blood cells. Low levels of vitamin B12 can cause a type of anaemia.
Keeps nerves working properly.

Found in eggs, meat, poultry, shellfish, milk

65
Q

Vitamin B1

Thiamine

A

Helps with energy production in your body.

66
Q

Vitamin B2

Riboflavin

A

Helps with energy production in your body.

Helps your body use other B vitamins.

67
Q

Vitamin B3

Niacin

A

Helps your body to use protein, fat and carbohydrate to make energy.
Helps enzymes work properly in your body.

68
Q

Biotin

A

Allows your body to use protein, fat and carbohydrate from food.

69
Q
Vitamin B6
(Pyridoxin)
A

Helps your body to make and use protein and glycogen which is the stored energy in your muscles and liver.
Helps form haemoglobin which carries oxygen in your blood.

70
Q

Folate
(also known as folic acid)

A

Helps to produce and maintain DNA and cells.
Helps to make red blood cells and prevent anaemia.
Getting enough folic acid lowers the risk of having a baby with birth defects like spina bifida.

71
Q

Vitamin C

A

May help preventcell damage andreduce risk for certain cancers, heart disease and other diseases.
Collagen synthesis - helps heal cuts and wounds and keeps gums healthy.
Protects you frominfections by keeping yourimmune system healthy.
Increases theamount of iron yourbody absorbs from some foods.

72
Q

Vitamin A

A

Helps you to see in the day and at night.
Protects you from infections by keeping
skin and other body parts healthy.
Promotes normal growth and development.

73
Q

Carotenoids

A

Carotenoids are not vitamins but some types can turn into vitamin A in the body.
Act as antioxidants which protect your body from damage caused by harmful molecules called free radicals.

74
Q

Vitamin D

A

Increases the amount of calcium and phosphorus your body absorbs from foods.
Deposits calcium and phosphorus in bones and teeth, making them stronger and healthier.
Protects against infections by keeping your immune system healthy.

75
Q

Vitamin E

A

Helps to maintain a healthy immune system and other body processes.

76
Q

Vitamin K

A

Makes proteins that cause our blood to clot, when you are bleeding.
Involved in making body proteins for your blood, bones and kidneys.

77
Q

Sodium

A

Needed for fluid balance, nerve conduction, and muscle contraction

78
Q

Chloride

A

Needed for fluid balance, stomach acid

79
Q

Potassium

A

Needed for fluid balance, nerves and muscles

80
Q

Calcium

A

Important for healthy bones

and teeth; etc.

81
Q

Phosphorus

A

Important for healthy bones

and teeth; found in every cell.

82
Q

Magnesium

A

Found in bones and all cells.

83
Q

Sulfur

A

Found in protein molecules