Genetics Flashcards

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1
Q

Nucleosome

A

8 histones wrapped in DNA

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2
Q

Chromatin

A

The entire DNA/protein complex (including small amount of rna)

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3
Q

Heterochromatin

A

Chromatin that is tightly condensed

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4
Q

Euchromatin

A

Chromatin that is uncoiled and able to be transcribed.

Only coiled during nuclear division.

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5
Q

DNA methylation

A

Most common example of epigenetic regulation through chemical change.
Involves the addition of an extra methyl group to particular cytosine nucleotides.
Causes DNA to be wound more tightly so those sections cannot be transcribed.

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6
Q

of chromosomes in human somatic cell

A

46 double stranded DNA molecules

23 homologous pairs of chromosomes

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7
Q

Homologues

A

Two chromosomes that code for the same traits

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8
Q

Diploid

A

Cell that contains homologous pairs of chromosomes

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9
Q

Haploid

A

Cell that doesn’t contain homologues

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10
Q

Histones

A

Globular proteins that sections of DNA not in use are wrapped tightly around.
Have basic functional groups that give these proteins a net positive charge at the normal pH of the cells.
Net positive charge attracts the negatively charged DNA and assists in the wrapping process.

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11
Q

Cell Cycle - G0

A

non-growing phase
most cells spend majority of life in this phase
most protein production take place during this phase when the cell is not exerting energy in self-replicating

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12
Q

Transcription

A

process by which RNA is manufactured from a DNA template.
3 main stages: initiation, elongation and termination.
Main level of activation or deactivation of genes.

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13
Q

Transcription: Initiation

A

a group of DNA binding proteins called transcription factors identifies a promoter (a sequence of DNA nucleotides that designates a beginning point for transcription.
major enzyme of transcription is RNA polymerase. it unzips the DNA double helix.

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14
Q

Transcription: Elongation

A

RNA polymerase transcribes one strand of the DNA nucleotide sequence into a complementary RNA nucleotide sequence. Reads DNA 3’ - 5’, builds RNA 5’ - 3’.
Transcribed strand is template or (-) antisense strand, other strand is coding or (+) sense strand.
No proof reading mechanism (errors in RNA are not called mutations and not transmitted to progeny).

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15
Q

Transcription: Termination

A

end of transcription.

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16
Q

Post-transcriptional processing

A

Takes place in the nucleus.
5’ cap serves as an attachment site in protein synthesis during translation and as a protection against degradation by enzymes that cleave nucleotides.
3’ end is similarly protected from exonucleases by the addition of a long series of adenine nucleotides (poly A tail).
Introns are removed through splicing which involves snRNPs (and lariat).

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17
Q

Alternative splicing

A

allows the cell to incorporate different coding sequences (omitting certain exons, incorporating certain introns, utilizing variable splicing sites) into the mature mRNA.
an important contributor to the diversity of protein products.

18
Q

Start codon

A

5’ - AUG - 3’

19
Q

Stop codons

A

5’ - UAA, UAG, or UGA - 3’

20
Q

Translation

A

takes place using a ribosome (free-floating in cytosol or attached to outer surface of ER).
3 stages: initiation, elongation and termination.
within each ribosome there are 3 sites where tRNA can bind. A site - Anticodon matches up with the codon. P site - a Peptide bond between amino acids is formed. E site - the tRNA which now lacks an amino acid can Exit the ribosome.

21
Q

Cell Cycle - S phase

A

DNA replication takes place during the S phase of the interphase portion of the cell cycle.

22
Q

5 main steps of DNA replication

A
  1. Helicase unzips double helix
  2. RNA polymerase (primase) builds a primer
  3. DNA polymerase assembles the leading and lagging strands
  4. RNAse H removes the primers
  5. DNA ligase joins the okazaki fragments together.
23
Q

Telomeres

A

repeated 6 nucleotide units that protect the ends of chromosomes.

24
Q

Mitosis

A

nuclear division without genetic change.

stages: PMAT

25
Q

Prophase

A

characterized by condensation of chromatin into chromosomes.
centrioles move to opposite poles of the cell.
First the nucleolus and then the defined nucleus disappear as the nuclear envelope breaks down.
Spindle apparatus begins to form, consisting of asters and spindle microtubules.

26
Q

Metaphase

A

chromosomes align along the equator of the cell.

27
Q

Anaphase

A

Sister chromatids split at their attaching centromeres and segregate to opposite sides of the cell. This split is termed disjunction.
Cytokinesis, the actual separation of the cellular cytoplasm due to constriction of microfilaments around the center of the cell, may or may not commence towards the end of this phase.

28
Q

Telophase

A

nuclear membrane reforms followed by reformation of the nucleolus.
chromosomes decondense
cytokinesis continues.

29
Q

silent mutation

A

type of neutral mutation in which the amino acid sequence is unchanged.

30
Q

missense mutation

A

base substitution changes a codon

31
Q

nonsense mutation

A

change to nucleotide sequence creates a stop codon where none previously existed.

32
Q

frameshift mutation

A

occurs when deletions or additions occur in multiples other than three. often result in completely non-functional proteins.

33
Q

Meiosis I

A

separate homologous chromosomes to produce two haploid cells (reductive division). Proceeds similarly to mitosis.

34
Q

Prophase I

A

homologous chromosomes line up and may exchange sequences of DNA nucleotides in a process called crossing over.
when genes on the same chromosome are located close together, they are more likely to cross over together and are said to be linked.

35
Q

Metaphase I

A

two homologues remain attached and move to the metaphase plate. 23 tetrads lined up in humans.

36
Q

Anaphase I

A

homologous chromosomes each separate from their partner independently assorting to create two haploid cells.

37
Q

Telophase I

A

nuclear membrane may or may not reform and cytokinesis may or may not occur. In humans, both do. When cytokinesis occurs, the new cells are haploid with 23 replicated chromosomes and are called secondary spermatocytes or secondary oocytes. In the case of female, one of the oocytes (first polar body) is much smaller and degenerates.

38
Q

Meiosis II

A

proceeds through PMAT II appearing much like mitosis. Final products are haploid gametes each with 23 chromosomes.
In the case of spermatocyte, four sperm cells are formed.
In the case of oocyte, a single ovum is formed after degeneration of the polar bodies (telophase II produces one gamete and second polar boy).

39
Q

Nondisjunction

A

when, during anaphase I or II the centromere of any chromosome does not split.

40
Q

Gamete production in females

A

Oogonium (diploid) undergoes mitosis to produce two primary oocytes (takes place before birth). Primary oocytes remain arrested in prophase I until puberty. In preparation for ovulation, a primary oocyte completes meiosis I producing a secondary oocyte (haploid). Secondary oocyte begins meiosis II but is arrested in metaphase II and only completes meiosis II when penetrated by a sperm during fertilization.

41
Q

Hardy-Weinberg Principle

A

conditions of a population to be in hard-weinberg equilibrium:
1. No selection for the fittest organism
2. Random mating
3. large population
4. immigration or emigration must not change the gene pool
5. mutational equilibrium
p2 + 2pq + q2 = 1 (p represents frequency of dominant alleles and q represents frequency of recessive alleles)
p + q = 1