Genetic disorders Flashcards

1
Q

Define allele

A

Variant form of a gene in the same locus

Humans are diploid because they have two alleles at each genetic locus

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2
Q

Define genotype

A

Pair of alleles represents a genotype of a specific genes

Broadly, the genotype refers to the genetic makeup of an organism

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3
Q

Define homozygous

A

A genotype that features two identical alleles

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4
Q

Define heterozygous

A

A genotype that features two different alleles

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5
Q

Define phenotype

A

Composite of an organism’s observable characteristics or traits

Results from the expression or the interaction between an organism’s genotype and environmental factors

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6
Q

Define dominant

A

Allele that will be manifested in the phenotype of a heterozygote

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7
Q

Define recessive

A

Allele that won’t be manifested in the phenotype of a heterozygote, manigestation only results in homozygous individuals

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8
Q

Define mutation

A

Permanent alteration of the nucleotide sequence in the genome

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9
Q

Define wild type

A

An allele which is not mutated and codes the phenotype most common in a natural population

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10
Q

Define SNP

A

Mutation carried by more that 1% of the population

Leads to variations in the amino acid sequence

Also occur in noncoding regions of DNA

If SNPs occur in a gene, the gene is described to have more than one allele

Does not significantly affect the phenotype, so is not selected for and therefore survives in the population

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11
Q

Define mendelian disorder

A

Disorder controlled by a single locus in an inheritance pattern based on Mendel’s Law

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12
Q

Define genetic susceptibility

A

Increased likelihood of developing a particular disease based on a person’s genetic makeup

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13
Q

What information does DNA provide?

A

Information to understand how living organisms function

Study and treat disorders

Understand disease susceptibility

Study history and evolution

Make drugs

Understand and treat cancer

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14
Q

What is a genetic disorder caused by?

A

One or more abnormalities in the genome

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15
Q

TRUE or FALSE

All mutations are passed down

A

FALSE

Only if it occurs in the germline

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16
Q

Example of an autosomal dominant condition

A

Huntington’s

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17
Q

Example of an autosomal receissive condition

A

Cystic fibrosis

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18
Q

Example of a X-linked disorder

A

Haemophilia A

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19
Q

Example of a non disjunction condition

A

Trisomy 21

20
Q

Example of a condition caused by DNA deletion

A

Cri-du-chat

21
Q

What are the 4 types of genetic disorders?

A

Single gene

Chromosomal

Multifactorial

Somatic

22
Q

Types of chromosomal genetic disorders

A

Deletion

Duplication

Inversion

Translocation

Non disjunction

23
Q

Types of single gene genetic disorders

A

Autosomal dominant

Autosomal recessive

X-linked

24
Q

Pedigree of autosomal dominant conditions

A

Occurs in half of the offspring

25
Q

Pedigree of X-linked recessive

A

Men are affected

Women are carriers

For women to be affected, the mother must have both copies of the recessive allele

26
Q

Pedigree of a Y-linked dominant

A

Never occur in females

Occur in all male descendent of an affected male

27
Q

Pedigree of X-linked dominant

A

If mother have the disorder

Males and females have even chance of receiving conditions

If father has the disorder

Daughters will 100% get disorder

None of the sons have disorder

If both have the disorder

  • 100% of daughters will have disorder
  • 50% of sons will have disorder
28
Q

What is congenital afibrinogenemia?

A

Condition characterised by the lack of fibrinogen protein in the plasma

Leads to increase in coagulation times

29
Q

What is fibrinogen?

A

Plasma hexameric glycoprotein

30
Q

Which cells secrete fibrinogen?

A

Secreted mainly by hepatic parenchymal cells

31
Q

What is the role of fibrinogen?

A

Plays an important role in haemostatic balance and support for platelet aggregation

32
Q

What mutation leads to congenital afibrinogenemia?

A

Mutation to one of the 3 fibrinogen genes

FGA
FGB
FGG

33
Q

Describe the process behind polymerase chain reactions

A

Technique used to make copies of a specific DNA region in vitro

Goal = make enough target DNA region so that it can be used

34
Q

How is Tag polymerase specialised for PCR?

A

Isolated from Thermus aquaticus bacteria

It is very heat-stable

Most active around 70C

35
Q

What is required for Taq polymerase to carry out its function?

A

Primer

36
Q

What are primers?

A

Specific sequences of DNA

Bind via complementary base pairing

37
Q

What is gel electrophoresis?

A

Technique used to visualise PCR reactions

Fragments of DNA are pulled through a gel matrix by an electric current which separates DNA fragments according to size

Exploits the negative charge of DNA

DNA fragments of the same length form a band on the gel which can be stained with a DNA-binding dye

38
Q

Describe the process behind Sanger sequencing

A
  1. The DNA molecule is denatured
  2. The solution with a single stranded DNA is added to DNA primers, DNA polymerase, four type of dNTPs and ddNTPs
  3. ddNTPs bind (lack hydroxyl groups) and elongation is terminated
  4. So if a ddNTP binds to the first complementary codon on a strand = reveals the first codon of the DNA
39
Q

How do ddNTPs terminate sequence elongation?

A

Lack hydroxyl groups

Nucleotides without hydroxyl groups cannot create phosphodiester bonds with adjacent nucleotides

40
Q

How do ddNTPs tell which base it is bound to?

A

Colour coded

41
Q

What are types of point mutations?

A

Silent

Nonsense

Missense

42
Q

What are conservative point mutations?

A

Mutated protein’s function is not too different from that of the wildtype

Causes limited phenotypic expression

43
Q

What are non-conservative point mutations?

A

Do have a big effect on wild type since the protein expressed as a cause of the point mutation is very different from that of the wild type

44
Q

Mechanisms underlying point mutations

A

Substitution

Insertion

Deletion

Inversion

45
Q

Describe the nomenclature for describing point mutations

A

g.1749T>G

Gene 1749 T is replaced by G

On amino acid 45 cysteine is replaced by phenylalanine