Genes & Health Flashcards

Topic 2

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1
Q

Describe the primary structure of a protein.

A

The specific sequence of amino acids in a polypeptide chain joined together by peptide bonds in condensation reactions.

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2
Q

Describe the secondary structure of a protein.

A

polypeptide chain coils into alpha helixes caused by hydrogen bonds or folds into beta pleated sheets.

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3
Q

Describe the tertiary structure of a protein.

A

Further folding of the secondary structure into a specific 3D shape. Held together by bonds between amino acid R groups.

Disulphide, ionic or hydrogen bonds formed.

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4
Q

Describe the quaternary structure of a protein.

A

3D arrangement involving more than one polypeptide chain.

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5
Q

Describe globular and fibrous proteins.

A

Globular proteins are compact and spherical. They are soluble. e.g. haemoglobin

Fibrous proteins are long chains that are strong and cross-linked. They are insoluble.
e.g. collagen

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6
Q

Where are the polar R groups found in a protein and why?

A

Found on the outside surface of the protein because they are hydrophilic therefore are attracted to other polar molecules.

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7
Q

Where are the non-polar R groups found in a protein and why?

A

Found on the inside of the protein because they are hydrophobic therefore repel other polar molecules.

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8
Q

Describe a conjugated protein.

A

Proteins with another chemical (prosthetic/ non-protein) group associated with their polypeptide chain/s.
e.g. glycoproteins and lipoprotein.

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9
Q

Name the 7 components of the Fluid Mosaic Model.

A

Proteins, glycolipids, glycoproteins, phospholipids, carrier channel (transmembrane) proteins, cholesterol, carbohydrates

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10
Q

Give two properties of cell membranes.

A

Fluid and therefore flexible.
Selectively/ partially permeable.

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11
Q

Describe the phospholipid bilayer.

A

Phosphate heads are polar and hydrophilic. Fatty acid tails are non-polar and hydrophobic.

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12
Q

Describe the structure of a phospholipid.

A

Phosphate head group and two fatty acids joined by a glycerol backbone by ester bonds.

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13
Q

Name the three passive transport processes.

A

Diffusion, Osmosis, Facilitated Diffusion

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14
Q

Name the three active transport processes.

A

Active transport, Exocytosis, Endocytosis

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15
Q

Define diffusion.

A

Net movement from an area of high concentration to an area of low concentration, down a concentration gradient.

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16
Q

Define facilitated diffusion.

A

Movement from an area of high concentration to an area of low concentration, through carrier or channel proteins.

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17
Q

Define osmosis.

A

Net movement of water molecules from an area of low solute concentration to an area of high solute concentration through a partially permeable membrane. Continues until isotonic.

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18
Q

Define active transport.

A

Movement from an area of low concentration to an area of high concentration through a carrier protein using ATP energy.

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19
Q

Define exocytosis.

A

Bulk transport out of a cell. A membrane bound vesicle, with the substance inside, fuses with the cell membrane and the vesicle membrane becomes part of the cell membrane, releasing the substance.

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20
Q

Define endocytosis.

A

Bulk transport into a cell. The cell membrane invaginates (bulges inwards) to form a vesicle which pinches off, enclosing the substance.

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21
Q

Name the two stages of protein synthesis.

A

Transcription and Translation.

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22
Q

Describe DNA.

A

Made up of a phosphate, deoxyribose sugar and a nitrogenous base of adenine, thymine, guanine or cytosine. This is a nucleotide, with phosphodiester bonds, formed by a condensation reaction.

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23
Q

Describe RNA.

A

Made up of a phosphate, a ribose sugar and a nitrogenous base of adenine, uracil, guanine and cytosine.

24
Q

Describe transcription.

A

Enzyme DNA helicase unzips the double helix, exposing the two strands by breaking the hydrogen bonds between the bases. Anti-sense strand of DNA is used as template. Enzyme RNA polymerase base pairs free complementary nucleotides with phosphodiester bonds, forming the coding strand, which produces a single strand of RNA (mRNA).

25
Q

Describe translation.

A

mRNA leaves the nucleus and attaches to the ribosomes in the cytoplasm. Triplets of bases form codons which are matched with complementary anticodons on tRNA. Amino acids attached to tRNA forms peptide bonds and primary structure.
Translation is caused by a start and a stop codon.
The code is non overlapping and degenerate.

26
Q

What are the different types of mutations?

A

Substitution and insertion/ addition, deletion causes frame shift.

27
Q

Explain how mutation changes function of protein e.g. enzyme.

A
  • Mutation results in a change in base sequence of DNA.
  • So there is a change in primary structure.
  • So change in position of the ionic bonds so protein is folded differently.
  • Therefore this causes a change in enzyme shape/ active site.
  • So no enzyme-substrate complexes can be formed.
28
Q

Describe what happens when there is extra water in the mucus.

A

Sodium is transported across the basal membrane and diffuses through sodium channels. Chlorine diffuses down an electrical gradient. Water is drawn out of cells due to the high salt concentration and then drawn out of the mucus.

29
Q

Describe what happens when there is too little water in the mucus.

A

Chlorine is transported across the basal membrane and diffuses through an open CFTR channel. Sodium diffuses down an electrical gradient. Water is drawn out of the cell and into the mucus.

30
Q

Describe what happens in cystic fibrosis sufferers.

A

CFTR channel is absent or dysfunctional. Sodium channel is permanently open. Water is constantly being removed from mucus. Mucus becomes thicker, stickier and viscous.

31
Q

Describe the effect of cystic fibrosis on the digestive system.

A

Pancreatic duct blocked with mucus, prevents release of digestive enzymes, food is not digested properly, resulting in malabsorption syndrome.

32
Q

Describe the effect of cystic fibrosis on the reproductive system.

A

Females are less likely to become pregnant due to a mucus plug in the cervix caused by viscous mucus.

Males may have a mucus plug in the vas deferens or may lack the vas deferent due to the viscous mucus which blocks the sperm duct and prevents sperm from being released.

33
Q

Describe how the lungs are adapted for rapid gas exchange.

A

-many alveoli provide a large surface area to volume ratio for gas exchange.
-alveoli/ capillary walls are one cell thick enabling a short diffusion pathway.
-ventilation of the alveoli maintains a steep concentration gradient.
-extensive capillary network around alveoli provides large surface area for gas exchange.

34
Q

Describe the nature of the genetic code.

A

-triplet code
-non-overlapping
-degnerate
-universal

35
Q

Describe the structure of a mononucleotide.

A

The pentose sugar in a DNA mono nucleotide is deoxyribose. The one organic base in a DNA mononuclotide could be adenine, cytosine, guanine, thymine. Nitrogen is found in the base of a mononucleotide.

36
Q

Describe structure of DNA.

A

DNA mononucleotides are joined together by phosphodiester bonds in condensation reactions to form two DNA strands. The two stands twist around each other forming a double helix and are joined by hydrogen bond between bases, which hold the two strands together.

37
Q

Describe DNA replication.

A

Enzyme DNA helicase breaks the hydrogen bonds between two DNA strands. Both DNA strands act as templates. Free mono nucleotides line up along both DNA strands and complementary base paring occurs. Hydrogen bonds form between bases to join the two DNA strands. Enzyme DNA polymerase joins adjacent mononucleotides with phosphodiester bonds in condensation reactions. Enzyme ligase follows and glues fragments together. (Semi-conservative replication).

38
Q

Define gene.

A

A sequence of bases on a DNA molecule that codes for a sequence of amino acids in a polypeptide chain.

39
Q

Define allele.

A

Alternative forms of a gene found at the same locus on a chromosome.

40
Q

Define genotype.

A

The alleles in an organism, for a particular gene.

41
Q

Define phenotype.

A

The observable characteristic, due to the expression of a genotype/alleles, which may be affected by the environment.

42
Q

Define recessive allele.

A

Both alleles need to be present in order for the recessive phenotype to be observed (only expressed if the dominant allele is not present).

43
Q

Define dominant allele.

A

Only one allele needs to be present for the dominant phenotype to be observed.

44
Q

Define incomplete dominance.

A

When there are two different alleles in the genotypes and both alleles are expressed in the phenotype of the organism - both alleles have an equal weighting in the expression.

45
Q

Define homozygous.

A

A genotype where both alleles present at a gene locus are the same.

46
Q

Define heterozygous.

A

A genotype where both alleles present at a gene locus are different.

47
Q

Define homologous chromosomes.

A

A pair of chromosomes, similar in length, with the centimetre and genes in the same position.

48
Q

Define gene locus.

A

The position of an allele on a chromosome.

49
Q

Define carrier.

A

An organism with a heterozygous genotype. They have one allele for a condition/ characteristic, but it is not expressed in the phenotype.

50
Q

Define monohybrid inheritance

A

Inheritance of one gene is responsible for the expression of the genotype.

51
Q

Compare and contrast the structures of DNA and RNA.

A

Similarites:
- The mononucleotides are joined by phosphodiester bonds in condensation reactions.
- Both made of mononucleotides composed of phosphate, a pentose suagr and an organic base.
- They both share three bases that are the same - adenine, guanine, cytosine.

Differences:
- DNA is double stranded whereas RNA is single stranded.
- DNA has thymine whereas RNA has uracil.
- The sugar in DNA whereas in RNA it is ribose.

52
Q

What are the 3 types of pre-natal screening?

A

Amniocentesis, chorionic villus sampling, NIPD.

53
Q

Describe amniocentesis.

A

Carried out when fetus is in uterus at 15-17 weeks. Fetal cells collected from the amniotic fluid surrounding fetus using a needle into the abdomen - dna extracted and analysed to detect gene mutation. 0.5-1% risk of miscarriage.

54
Q

Describe chorionic villus sampling (CVS).

A

Carried out when fetus is in uterus between 8-12 weeks. Fetal cells are collected from the placenta using a needle into abdomen or cervix into uterus via vagina - dna extracted and analysed to detect gene mutation. 1-2% risk of miscarriage.

55
Q

Describe non-invasive prenatal diagnosis (NIPD).

A

Carried out when fetus is in the uterus between 7-9 weeks. Analyses DNA fragments (cell free fetal DNA) from the mothers blood plasma to detect gene mutation.

56
Q

Describe pre-implantation genetic diagnosis (PGD).

A

Carried out during 8 cell embryo stage in IVF. One cell is taken from the embryo and dna is extracted and analysed to detect gene mutation.

57
Q

Describe the disadvantages/ implications of genetic screening.

A

Risk of miscarriage (amniocentesis + CVS)
False positive result could results in abortion of a healthy fetus.
Emotional and physical stress of choosing an abortion.