gene therapy Flashcards

(33 cards)

1
Q

what is gene therapy

A

delivery of genentic material into a patients cells as a drug to treat diseases associated with genetic mutation/changes in gene expression

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2
Q

how can a gene mutation lead to disease (4)

A
  1. mutation in the promotor: increase or decrease in mRNA
  2. mutation in coding sequence: creation of different protein but this may be harmless
  3. mutation in splice site: production of incorrectly spliced mRNA (removal of introns)
  4. mutation in regulatory element: increase or decrease in protein production
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3
Q

what is the effetc of a mutation in coding sequence (exon)

A

can result in a different amino acid being incormpeated into the protein sequence leading to the formation of a mutant protein. This can be harmful or harmless

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4
Q

give an example of a disease where there is a mutation in the coding sequence and the resulting phenotype

A

sickle cell. there is a mutation in both copies of the beta-globin gene. It is autosomal recessive . Hemoglobin S forms instead of haemoglobin A - s is cresent shaped - impared transportation of oxygen. mutation is GAG to GTG - leads to glutamic acid instead of valine at position 6 in protein

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5
Q

define autosomal recessive

A

both parents need to be carrying the gene and pass it onto the child

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6
Q

what is a frameshift mutation

A

where deletion of substitution occurs in multiples of 3 (codon)

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7
Q

what is a nonsense mutation and what is the result

A

premature termination codon = truncated protein

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8
Q

what is the effect of a mutation in the promotor region

A

this leads to changes in gene expression. The binding of the transcripton factor will be varied due to a different site. It will be recognised differently. This will effect gene expressn

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9
Q

what is the effect of a mutation in the control element

A

This is where a mutation leads to changes in the regulation of expression by splicing trans-acting factors (Regulatory proteins that control gene expression).

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10
Q

what are trans acting factors

A

Regulatory proteins that control gene expression. They bind to DNA to influence transcription of genes

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11
Q

whta must gene therapy be able to do

A

target the correct cells, act for long enough whilst not compromising cell funtion

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12
Q

what is the therpy Glybera used for

A

treats rare metabolic diseases that causes pancreatitis, LPLD (
Lipoprotein lipase deficiency)
works via the delivery of the LPL gene

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13
Q

what are some of the challanges and mutations of glybera

A

delivery to correct target cell, maintenence of delivered gene in target cell, high cost of drug development.
it is only suitable for diseases that are caused by reduced production of a protein product. We therefore cant achieve a precise level of expression of a delivered gene so it is only useful if the level of expression does not matter

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14
Q

describe ex vivo gene delivery

A

take the target cells out of the patient. introduce the gene and then return them to the patient. allows precose targeting and increased efficiency

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15
Q

describe in vivi gene delivery

A

Introduce the gene directly into the patient into the target tissue. eg aerosol delivery if target is lungs

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16
Q

describe the differences in viral vs non viral delivery

A

viral delivery leads to more effieicnt uptake than non viral. There is higher selectivity for specific cell types and the effect can persist in cells for much longer. However there is higher risk of immune response, and there is a limit on the size of the gene that can be incorporated compared to non-viral

17
Q

why may viral delivery be used

A

target and attach to specific cells
transport genetic material directly to nucleus and maintenance as DNA
Sustained expression of genetic material over time

18
Q

what type of viruses are used for viral delivery

A

adeno-associated virus, DNA virus, lentiviruses, retroviruses

19
Q

what are lentuviruses

A

A type of retrovirus. these are highly modified viruses such as HIV, They allow incorpration of a delivered gene into the host genome and therefore genetic expression is maintained during cellular activity. They can integrate into both dividing and non-dividing cells

20
Q

what is AAV (viral delivery)

A

non-pathogeic, low immunogenicist. they cna infect dividing and non-dividing cells. They cannot replicate without the use of helper viruses. They are very small so the size of the gene is limited

21
Q

what is CAR-T immunotherapy

A

form of adoptive cell transfer. T cells are taken from a patient and genome is engineered to produce chimeric antigen receptors - recognise antigens on cancer cells. return these cells to patients and allow then to multiply and kill cancer cells.

22
Q

what are some of the key issues associated with CAR-T therapy

A
  • cytokine storm can occur
  • solid tumour - harder to target
23
Q

describe how gene therpy has been used for heamophillia

A
  • blood clotting disorder caused by lack of clotting factors. x linked recessive inheritance
  • Gene therapy for hemophilia involves delivering a functional F8 or F9 gene to hepatocytes using adeno-associated virus (AAV) vectors. This single infusion enables endogenous production of factor VIII (FVIII) or FIX protein, reducing bleeding in patients.
24
Q

what is genome editing

A

modification of genomic DNA

25
What are some examples of genome editing technologies
CRISPR/cas9, TALENS, meganucleases
26
what is CRISPR/Cas9 - genome editing
CRISPR comes from a proaryotic immine system that has been repurposed to allow site-specific genome modification in mammalian cells
27
what are some of the limitations with CRISPR/Cas9
- off target effects - less efficient at engineering in a prescice nucleotide seq - ethics of genome mod
28
what is cas9 protein
endonuclease that introduces a double strand break into DNA when recruited by sgRNA
29
how does CRISPR/cas9 work?
guide RNA (CRISPR) binds to the complementary sequence - opens up DNA CAS9 cleaves both strands of DNA at a targetted site Genomic modification occurs - insertions or deletions Non-homologous end joining or homology directed repair takes place
30
what elements are needed for CISPR/cas9
- protein - cas9 - can be delivered therapeutically as DNA, mRNA, or protein - RNA - delivered as DNA or RNA - this is CRISPR
31
Compare gene modification in somatic vs germline cells
somatic: changes to the genome in any cell other than a gamete or an undifferentiated cell type. This results in permanent changes in genomes and cannot be passed on to offspring. Delivery and maintenance can be difficult germline: changes to the genome in germ cells or early embryos - passed onto an individual's descendants - has the potential to eliminate inherited disease, but ethically difficult to justify - controversial.
32
why is genome editing in embryos currently not practical
high chance of off target effects inefficient disease causing mutations can already be avoided pre-implantation in IVF - screening different legal and ethical frameworks worldwide
33
What are antisense oligonucleotides
Antisense oligonucleotides (ASOs) are short, synthetic strands of RNA or DNA designed to bind specifically to complementary RNA sequences. They play a crucial role in modulating gene expression by targeting messenger RNA (mRNA) to alter its function, which can lead to the degradation of the mRNA or inhibition of its translation into protein. ASOs have potential applications in treating various conditions, including genetic disorders, viral infections, and certain cancers, by selectively silencing genes associated with these diseases. Their mechanisms of action include ribonuclease H-mediated decay of mRNA, steric blockage, and modulation of splicing.