Gene Regulation 2 Flashcards

1
Q

Histones

A

basic proteins in which DNA wraps around in eukaryotic cells

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2
Q

How do histones acomplish this?

A

4 of them form a core which DNA is wrapped.

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3
Q

What does the core contain?

A

Two copies of each histone H2A, H2b, H3 and H4.

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4
Q

Octamer

A

Core of histones

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5
Q

What does chemical modification to DNA and histones do?

A

Effects on transcription of genes near those modifications

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6
Q

Histone Acetylation of lysines

A

change positive charges to neutral ones and help “loosen” chromatin. This favors conversion of heterochromatin to euchromatin.

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7
Q

Where does modification of histones occur?

A

tails and occurs in abundance.

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8
Q

What are examples of histone modification?

A

methylation, acetylation, phosphorylation and others

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9
Q

What does DNA cytosine base modication do?

A

Via methylation, effect the inhibiting transcription of nearby genes.

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10
Q

What happens through generations?

A

These changes can be passed on through generations, effecting epigenetics.

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11
Q

What is an enhancer?

A

DNA sequence bound by transcriptional activator proteins. Only found in eukaryotes.

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12
Q

What does an enhancer provide?

A

allows for tissue specific expression of genes

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13
Q

What is a transcriptional activator?

A

bind enhancers, and w/ bending of DNA, can be brought into close proximity of the transcriptional machinery at promoter sequence.

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14
Q

Insulator sequences

A

AKA Silences, are sequences are are like enhancers, but instead operate to inhibit the transcription complex. Bound to proteins that interfere with interactions, thus reducing transcription.

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15
Q

Why is regulation or free iron important?

A

iron can facilitate formation of reactive oxygen species.

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16
Q

Ferritin

A

a cellular protein that binds free iron

17
Q

Transferrin

A

extracellular protein that transports iron to cells.

18
Q

Iron Response Element

A

region on ferritin mRNA (eukaryotes) that can be bound by a protein called IRE-BP.

19
Q

What does IRE-BP do?

A

binds iron response element when iron is absent, thus inhibiting translation of ferritin mRNA as the ribosome is blocked.

20
Q

When iron is abundant…

A

IRE-BP binds to iron an can’t bind to IRE. This means ferritin is made because the ribosome is not blocked from translation the mRNA.