Fungi Flashcards

1
Q

classification

A

eukaryotes - opisthokonta ‘cells propelled by a single posterior flagella’ although it’s been lost in fungi

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2
Q

name 2 things only recently eliminated from fungi

A

the slime moulds and oomycetes, traditionally placed in the fungi, are in completely different groups and have only recently (2010!) been eliminated from fungi. Still v controversial among mycologists

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3
Q

fungal phyla

A
basidiomycota
ascomycota
glomeromycota
zygomycota
chytridomycota

IN THAT ORDER

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4
Q

which phyla haven’t moved about

A

basidiomycota

ascomycota

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5
Q

what are fungi?

A

• Eukaryotic
• Typically haploid nuclei
▪ They are true diploids but spend most of their time in haploid state
• Reproduce mainly with sexual and asexual spores
• Rigid cell walls with chitin
• Mostly filamentous (hyphal) growth form
• Heterotrophic
▪ All require preformed organic material
▪ There are no known photosynthetic fungi!!!!!

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6
Q

fungal cell wall

A
mannoproteins
B-1,6-glucans and
B-1,3-glucans
CHITIN (makes it rigid)
phospholipid bilyaer of cell membrane
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7
Q

function of fungal cell wall

A
Functions:
• Determines shape
• Provides protection
• Site of nutrient exchange
• Allows system to be pressurised via turgor (osmotic pressure)
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8
Q

what are fungal hyphae?

A
  • Hollow tube containing cytoplasm
  • Has a rigid wall
  • Lots of CYTOPLASMIC STREAMING which move at quite high rates (allow mixing and transport of contents)
  • May be compartmentalised with SEPTA, which roughly divide the tube into different sections
  • Growth occurs at the tip and branch points (vesicles!)
  • Typical eukaryote with nucleus in membrane, ER, mitochondria, golgi etc.
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9
Q

Model of apical hyphal growth

A

Model of apical hyphal growth
• Vesicles containing lytic enzymes fuse with the membrane about 10μm from the tip
• Enzymes break down some of the wall polymers – local weakening
→ There is a constant balancing act between stability and chaos
→ The enzymes want to dissolve the wall enough to weaken it without deforming too much so that it fails
• High turgor pressure in the hyphae causes weakened viscoelastic wall to stretch
• Vesicles containing new wall precursors fuse and new material is synthesised
→ The cytoplasmic stream is essential to transport material for forming a new cell wall from far away
• Hyphae re-hardens and tip has moved forwards

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10
Q

Complex 3D hyphal networks

  • form by
  • gives rise to
A

These form by…

• apical tip growth and branching
- The extent of branching dep. on the species and the nutritional status of the environment

• hyphal fusion (anastomosis)
- Fusion allows remodulation of transport system. Can do so in optimal fashion

This gives rise to…
• Radially symmetrical colonies on rich media
- Hyphal fusion can remodel these radial colonies

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11
Q

Function of septa

A

Provides mechanical strength
Mechanism for isolating damaged or ageing hyphal lengths
Allows differentiation e.g. during sporulation

Not all fungi have them!
- zygomycetes don’t, asco and basidio do

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12
Q

hyphae colonies

  • diff between inner and outer regions
  • regulation of whole colony growth under diff environmental conditions
A

Inner region = denser, fused hyphae
- Positive autotrophy and anastomosis give good connectivity for transport

Outer region = sparser, unbranched hyphae

  • Exploratory hyphae
  • Negative autotropy giving good space-filling

• Branching frequency is sensitive to environmental conditions.
- Under nutrient excess, there are more exploratory hyphae (fungal foraging) and there are more dense colonies

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13
Q

Autotropism –

A

sensing of neighbouring hyphae via O2 or CO2 concentrations followed by growth towards (+ve) or away (-ve) from neighbours

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14
Q

Do zygomytes have septa?

A
  • Normally aseptate, allowing unrestricted cytoplasmic streaming.
  • But sometimes form septate to allow isolation
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15
Q

Do Ascomycetes have septa?

A

Ascomycetes – Woronin body

  • Woronin bodies clog septal pores
  • Open form allows cytoplasmic streaming and nuclear and major organelle movement
  • Closed form provides isolation if compartment damaged
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16
Q

Do Basidiomycetes have septa?

A

Basidiomycetes – Dolipore septum (looks like a stomata)

  • Allows cytoplasmic streaming but restricts nuclear and major organelle movement
  • Extent of regulation depends on degree of swelling, which regulates aperture
  • Fully swollen form of dolipore septum provides isolation
17
Q

How big are fungi?

A
• Microscopic hyphae: 1-10μm in diameter
• Macroscopic mycelium:
‘dark honey fungus’ is the largest living organism.
- Plant pathogen
- It covers an area of 10km
- Estimated weight ~20,000kg
18
Q

What are the two types of fungal growth forms?

A

filamentous

unicellular division

  • budding in yeast
  • fission in yeast

Some species are dimorphic – filamentous or unicellular depending on environment

19
Q

unicellular division

Budding in yeast

A
  • Saccharomyces cerevisiae

- Vegetative cell develops bud, which detaches to form daughter cell

20
Q

unicellular division

Fission in yeast

A
  • Saccharomyces pombe
  • Division is as is in bacteria
  • Septum forms in vegetative cell, forming two identical daughter cells
21
Q

how do fungi get nutrition?

A

SAPROTROPHIC NUTRITION
- secrete extracellular enzymes and then absorb via diffusion

• Using cell surfaces to absorb nutrients imposes a SA:Vol ratio constraint
→ Forces fungal hyphae to be microscopic in size like bacteria
→ Restricts hyphal diameter but not hyphal length, as we know from Armillaria ostoyae
• Extracellular enzymes released mostly from tip eg. Cellulases, lactases, proteases

Cellulose, lignin, protein are enzymatically depolymerised to simple sigars/a.as etc and absorbed through cell wall and membrane

22
Q

Do fungi have cells?

A

• Hard to define fungal cells or their ‘basic unit’

  • Septal compartment? – works for ascomycetes and basidiomycetes but many fungi are aseptate
  • Hyphal growth unit? – ie. The smallest unit that can regenerate
23
Q

fungal diversity - how many are there?

A

• 70,000-100,000 named species so far
• ~1000 new species named every year
• Recent estimates of diversity: 1.5-5.1 million species of fungi in the biosphere
- Only a v small % fungal diversity has been discovered
• They’re very abundant - per m2, length of fungi could wrap round the planet twice

24
Q

When did fungi evolve?

A

• There is weak evidence that they were around ~1billion years ago (after higher algae, before the first fossils)

First fossils 400mya in devonian
Fossil fungi support that fungi co-evolved with early vascular plants

25
Q

Where do fungi live?

A
  • Fungi are the main decomposers around the planet
  • There are a few marine and freshwater species (1-2%) BUT
  • They are almost exclusively terrestrial
  • Almost all plants are in a symbiotic relationship with a fungus – they occupy a huge mutualistic niche
26
Q

Impacts of fungi

list 6

A

Extinction of the dinosaurs changed face of earth

Past epidemics

Very useful in manufacturing/factories

Rots our houses

Agents of disease

Potential saviours as mutualists

27
Q

How did fungi contribute to extinction of the dinosaurs

A

Fungal diseases are much more harmful to dinosaurs than mammals

o After the meteor struck earth 65mya, dust cloud that enveloped the earth
→ Iridium peak at KPg boundary which had extraterrestrial origin
o Huge global DEFORESTATION due to lack of sunlight
o The dead organic matter that resulted was FOOD FOR FUNGI, and resulted in extreme FUNGAL BLOOM
→ There is a layer of fungal spores found at the KPg boundary

o Dinosaurs and mammals exposed to high levels of airbourne spores

o INFECTIONS more widespread for cold-blooded dinosaurs (high temps shown to inhibit fungal pathogens)

→ Dinosaur extinction due to infection
→ Mammals flourished

28
Q

name a past epidemic caused by fungi

A

Dutch Elm Disease
 Current outbreak started in late 1960s
 O. ulmi
 2/3 elms dead
 English elms went extinct by a beetle vector of the pathogen
 Major source of biodiversity removed from British ecosystem

29
Q

uses of fungi in manufacturing/factories

A
  • Organic acids (citric acid)
  • Enzymes (brewing, baking, cheese)
  • Drugs (antibiotics eg. penicillin, immunosuppresants)
30
Q

Fungi as agents of disease

A

Humans
 Less of a threat than bacteria and viruses
 Still can be bad if immunocompromised

Plants
 Greater threat than nematodes, bacteria and viruses
▪ This can cause big issues for humans due to our heavy reliance on a few staple crops for carbs eg. Wheat, rice, maize
▪ Fungi responsible for huge loss in yield of these
▪ We have to double food production by 2050

Eg. Puccinia graminis on wheat
Basidiomycete
• Causes wheat stem rust
• Serious pathogen, causing up to 100% yield loss
• Has caused great historical famines
31
Q

mutualist fungi

A

o 95% of all vascular plants form association with around 6000 fungal species
o Essential for nutrient and water uptake from soil in stressed environments

mycorrhizae is a symbiotic association between a fungus and a plant