Functions and Dysfunctions of Protein Processing Flashcards
What is the difference in the ribosomal structure of prokaryotes and eukaryotes?
Prokaryotes contain a 30S and 50S subunit. Eukaryotes contain a 40S and 60S subunit.
Describe the mechanism for the antibiotic Streptomycin.
Binds to 30S subunit and interferes with binding of fmet-tRNA and impairs initiation. Interferes with 30S subunit association with 50S subunit.
Describe the mechanism for the antibiotic Clindamycin and erythromycin.
Binds to large 50S subunit, blocking translocation of the ribosome.
Describe the mechanism for the antibiotic Tetracycline.
Binds to small 30S subunit, blocks entry of aminoacyl-tRNA to ribosomal complex and impairs elongation.
Describe the mechanism for the antibiotic Chloramphenicol.
Inhibits peptidyl transferase activity and impairs peptide bond formation.
Describe the mechanism of Shiga toxin and Ricin.
Binds to large 60S subunit (euk.), blocking entry of aminoacyl-tRNA to ribosomal complex.
Describe the mechanism of Diphtheria toxin.
Inactivates GTP-bound EF-2, interfering with ribosomal translocation (euk.)
Describe the mechanism of Cycloheximide.
Inhibits peptidyl transferase (euk.) and impairs peptide bond formation.
Describe the mechanism of Puromycin.
Causes premature chain termination (prok/euk). It resembles the 3’ end of the aminoacylated-tRNA. Leads to premature chain release when attached.
Describe the mutation that causes Sickle Cell Anemia and its effect on RBCs.
Arises from a missense mutation that changes Glutamic acid (negatively charged, hydrophilic) to Valine (hydrophobic). The change occurs in HBB, a subunit of hemoglobin. Deforms RBCs into sickle-cell shape, which have poor oxygen capacity and tend to clog capillaries.
Describe the mutation that causes Duchenne Muscular Dystrophy (DMD) and its effect on RBCs.
Caused by a large out-of-frame deletion to the dystrophin gene, leading to little/no expression of dystrophin gene. Leads to muscle wasting.
What is the difference between Duchenne Muscular Dystrophy (DMD) and Becker Muscular Dystrophy (BMD)?
DMD is an out-of-frame deletion. BMD is a milder version with an in-frame deletion.
What sequence signal localizes a protein to the mitochondria?
N-terminal hydrophobic alpha-helix
What sequence signal localizes a protein to the nucleus?
A Lysine and Arginine rich sequence
What sequence signal localizes a protein to a peroxisome?
Serine, Lysine, and Leucine (SKL)