Fibroblasts in RA Flashcards

1
Q

why have RA outcomes improved?

A

Outcomes have been improved in last 20 years due to drugs targeting the immune system
- Drugs are DMARDs and biologics that target immune system
- Broad: methotrexate
- Highly selective: anti-TNF, anti-CD20, anti-IL-6R
- All DMARDs target immune system to antagonise joint inflammation - pain, swelling, stiffness, loss of function
- 50% patients achieve sustained disease-free on-drug remission, where they must keep taking drugs
- Other 50% can still have disease control

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2
Q

what happens when drugs are removed?

A

If drugs are removed, 50% relapse between first 12 months of treatment
- Not cure, just suppression
- active therapeutic suppression of disease can antagonise inflammation, but doesn’t reverse disease process in target tissue effector phase, hence relapse– how can we cause true remission with drug removal
- Drugs can have long-term toxicity – immunosuppression (increased risk of infection), liver function issues, bone marrow issues

What occurs in tissue itself and what disease processes should we reverse to enable full remission?

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3
Q

how can we find what can reverse disease processes?

A

access to target tissue is needed
- Synovial tissue biopsy - minimally invasive, ultra-sound guided
- Guide wire into synovial lining
- See bone, fluid, thickened lining
- Needle takes small sample of tissue from lining
- Can do this longitudinally before and after treatment, and in early stage
- means we don’t have to wait to get tissue samples when someone is having surgery, and can instead do it in early stages

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4
Q

how can the synovial tissue sample be studied?

A

Tissue staining of synovial lining
- Blue = lining layer
- Red = blood vessels = angiogenesis
- Areas of inflammation – immune cell aggregates – T cells, B cells, macrophages - infiltration of inflammatory cells

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5
Q

what is the normal synovial joint like?

A

Thin lining:
- Some fibroblasts – mesenchymal structural cells that are tissue-resident
- TRMs form protective barrier around synovium – phagocytose cartilage debris in synovial fluid from joint during locomotion

Sublining tissue – mostly made of fatty cells, scattered fibroblasts, blood vessels

  • in health, its mainly the lining layer present
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6
Q

what is the RA synovium like?

A

Inflammation
- Lining layer barrier is disrupted – macrophages become active – more clearance of debris, change morphology
- Expansion and activation of lining layer fibroblasts – release factors to drive damage
- Pathogenic remodelling of sublining tissue: more blood vessels, fibroblast expansion, infiltration of inflammatory cells from bloodstream, T B cells monocytes which differentiate to macrophages, neutrophil

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7
Q

how have fibroblasts been shown to play a pathogenic role in RA?

A

Take human RA fibroblasts, grow in culture for months:
- Implant fibroblasts in a human cartilage implant into SCID mouse – immunodeficient for T and B cells, depleted adaptive system, so no GVHD
- When human cartilage implant is removed – human fibroblasts invade mouse cartilage and degrade it

These fibroblasts have an abnormal pathogenic phenotype maintained out of joint - actively contribute to damage
- in inflammation, there’s more fibroblasts with changed phenotype
- they aren’t bystanders, they contribute to disease

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8
Q

what is fibroblast inflammatory priming?

A

One inflammatory challenge = fibroblast responds with cytokines e.g. IL-6
Once challenge settles and hit again with inflammation = fibroblast has amplified response to second challenge – becomes more inflammatory and abnormal - primed

This is due to rewiring of fibroblast metabolism to be proinflammatory
- Gene pathway for metabolism primed to respond to second challenge

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9
Q

What cells are in joint in health vs disease?

A

Biopsy of synovium tissue and matched blood and synovial fluid samples
- Looked at cells present within using scRNA sequencing – profile of RNA from cells of disaggregated from tissue, blood and fluid
- Gene expression gives identify of cells which cluster with shared identity of gene expression
- Within tissue – blood vessels, pericytes, immune cells, fibroblasts
- Fibroblasts not detectable in blood and synovial fluid as they’re tissue resident
- Fibroblasts drive inflammation within joint

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10
Q

what does spatial transcriptomics show?

A

Spatial transcriptomics – take the gene expression data and project onto tissue to show where the different cell types are in the tissue
- H&E imaging – lining layer becomes densely infiltrated with inflammatory cells and expansion of tissue resident cells

Single-cell transcriptomics projection onto image:
- See lining layer fibroblasts, macrophages
- T cells populations beneath, along with blood vessels and perivascular fibroblasts surrounding them

Disaggregation of tissue loses spatial localisation – this method allows us to see organisation
- Can see how cells communicate within tissue space

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11
Q

is cell type composition in the joint the same across patients?

A

Different cells present in joint known
- Different cells map to different patient groups – joint composition is different across patients
- Heterogeneity of inflammation within tissue and within patients
- Population of RA patients have fibroblast-rich synovial pathotype

Heterogeneity explains why patients respond differently to drugs
- Helps determine what drugs to use

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12
Q

what different roles can fibroblasts have in disease?

A

Resolving inflammation - good
Drive inflammation/damage - bad

what drives the phenotype of fibroblasts depends on their tissue location

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13
Q

how do fibroblast phenotypes depend on their location in the tissue?

A

Where cells were located and gene expression data combined
- Synovial tissue stained for blood vessels, perivascular fibroblasts, and lining layer fibroblasts and macrophages
- Near endothelium = fibroblasts are more inflammatory and produce chemokines/cytokines to recruit and retain inflammatory cells from blood to joint - signal to endothelium to drive cells into tissue
- Interstitial fibroblasts - form niches to support survival of inflammatory infiltrating cells

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14
Q

how should fibroblasts be targeted in RA?

A

Want to intervene with these 2 populations that recruit and maintain inflammatory cells from the blood in the joint
- need to inhibit specific chronic, aberrant inflammation that drives disease without affecting normal inflammation e.g. important for healing
- identify mechanisms in tissue that promote survival of inflammatory cells and intervene long term to return tissue to homeostatic state = remission

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15
Q

what phenotype to fibroblasts have in the lining layer?

A

Fibroblasts in lining layer of RA = gene expression profile of damage
- Loss of normal function - no longer lubricate joint
- with inflammation, they drive bone damage and osteoclastogenesis

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16
Q

how was it shown that different fibroblast subsets drive different aspects of disease?

A

Mouse model:
- Isolated fibroblasts depending on location in tissue and gave back to mouse
- Perivascular inflammatory fibroblasts injected into joint of RA model causes increased inflammation that persists
- Lining layer fibroblasts injected into joint have no effect on inflammation severity but drive bone damage

There are different subsets of fibroblasts, similar to T cell effector populations
- Fibroblasts are not just bystanders, they actively drive damage and inflammation and resolution
- Enables selective targeting

17
Q

how do fibroblasts differentiate to an inflammatory phenotype?

A

Perivascular fibroblasts around blood vessels
- In inflammation, arterial endothelium is activated and signals via DLL4 to notch 3 expressed on fibroblasts nearby
- Causes fibroblast to differentiate to proinflammatory sublining fibroblast which drives inflammation

can inhibit this differentiation process

18
Q

what happens to fibroblasts with notch 3 is K/O or blocked?

A

Mouse with notch 3 K/O = inflammation is less severe as fibroblasts can’t differentiate
- mAb to notch 3 has same effect

19
Q

how do some fibroblasts for an immune exclusion zone? is this good?

A

Aggregations of T and B cells around blood vessels
- Stain for matrix proteins e.g. collagen released by fibroblasts support tissue
- Where there are aggregations of cells, fibroblasts secrete MMPs to break down the matrix and make space to support lymphocyte infiltration
- During repair and resolution of inflammation, there is a physical barrier of collagen around blood vessels to prevent migration of cells into tissue – this is formed by good fibroblasts – helping resolution and repair by forming areas of scarring to physically prevent infiltration

20
Q

what are the two key pathogenic populations of fibroblasts that have been identified?

A

Profiled fibroblasts using sc-seq in RA patients
2 key pathogenic populations that drive immune cells:
- Some stimulate inflammatory cell recruitment via T cell crosstalk
- Perivascular – recruit T cells - notch 3 response

21
Q

how can fibroblasts be targeted?

A
  1. Block differentiation of pathogenic fibroblasts
  2. Deplete established pathogenic fibroblasts in fibroblast-rich patients (these patients have disease driven by fibroblasts, not immune cells, so anti-TNF doesn’t work)
22
Q

what is fibroblast activated protein?

A

FAP: serine protease on surface of fibroblast which helps attach the fibroblast to cartilage and supports their migration in the joint

In joint FAP is not usually present, it is upregulated in inflammation by fibroblasts
- FAP doesn’t drive inflammation itself, it just is upregulated in pathogenic fibroblasts

23
Q

what happens when FAP is K/O?

A

Mouse K/O of FAP-expressing cells
- Suppression of inflammatory arthritis and reduced damage to bone
- Before depletion = high chemokine and cytokine signals at RNA and protein levels to recruit immune cells
- After depletion – these signals are reduced

Main producer of inflammatory signals is pathogenic FAP+ fibroblasts - by depleting these, global inflammation in the joint is reduced

23
Q

how is FAP expressed in RA?

A

Patients with early joint inflammation that went on to get RA, there was more FAP in joint compared to resolving or control
- with high levels FAP in the joint in early inflammation, these patients are more likely to be diagnosed with RA
- FAP may be biomarker for population of pathogenic fibroblasts
- To deplete these cells, they need to only be present in diseased tissue, and in healthy tissue

24
how can CAR-T cells be used to target fibroblasts in RA? how has this been shown in mice?
Use anti-FAP CAR-T to remove fibroblasts: - Mouse CAR-T cells engineered to attack FAP+ fibroblasts - Injected into knee joint of arthritic mouse – CAR-T suppress inflammation in joint
25
how should anti-FAP CAR-T be used in human?
Most patients don’t have one inflamed joint, RA is polyarticular, so one injection isn’t enough - Need systemic delivery that migrates to multiple joints - How can we get systemic CAR-T cells homing to correct tissue
26
does CAR-T home to the joint following injection?
Gave IV injection, labelled CAR-T with GFP: - Gave CAR-T: suppressed inflammation, found within inflamed joint, lasted for a day in the inflamed joint and was then exhausted after 72 days – good as they're not causing side effects elsewhere - Track effectively to inflamed joint only and partially deplete FAP+ fibroblasts - By day 9, FAP expression after came back, but disease was still resolved - why?
27
what was the phenotype of the FAP+ fibroblasts following CAR-T treatment?
New fibroblasts expressing FAP - Looked at CAR-T treated vs not treated and inflammatory fibroblasts in sublining and lining with gene expression analysis - After partial depletion with CAR-T of FAP fibroblasts, the entire fibroblast repertoire within the joint returns to homeostatic function with pro-resolving phenotype - Removed pathogenic break - removed the group of fibroblasts that sustain inflammation in the joint, so that removing a large proportion of them means the rest can return to normal homeostatic fibroblasts - shift of tissue to restoration
28
does CAR-T therapy suppress inflammatory tissue priming?
Most patients have relapsing-remitting inflammtion course of RA with flares - this can be modelled in mice Was there true tissue reset by removing FAP-expressing fibroblasts? Inflamed mouse with one hit and resolution - Give second hit and inflammation is worse - priming - Give CAR-T in first episode, the second insult is suppressed - Removal of pathogenic fibroblasts removes tissue priming and promotes reparative state Can look at open frames of chromatin to see where TFs can bind with ATAC sequencing - Priming was blocked by CAR-T in e.g. genes such as C3, IL-6, RANKL, FAP
29
does CAR-T work in a polyarticular arthritis mouse model?
IV CAR-T in RA polyarticular model, it does suppress inflammation severity - no. swollen joints goes down - But it plateaus: double the dose doesn’t deplete fibroblasts more – this is a good safety mechanism as FAP is expressed in multiple healthy tissues lowly - CAR-T cells only deplete cells with moderate-high FAP expression - Doubling dose doesn’t cause further depletion as moderate-high cells are gone, while low-FAP cells are safe from depletion and these are the fibroblasts that drive resolution and repair
29
how can CAR-T be tweaked to only bind cells with high FAP expression?
CAR-T cell sequence and structure can be tweaked so that antigen binding has high avidity or high affinity - Can only bind cells with moderate-to-high expression only - improves safety profile
30
in mice, is CAR-T better than anti-TNF?
CAR-T is better in mouse models - highly effective - targets fibroblasts, not immune cells so no immunosuppression - safer for patients as no increased risk of infection - restores tissue back to normality to sustain remission Depletion of FAP𝘢 fibroblasts alters the immune landscape in the synovium in CIA model - depletes fibroblasts, so depletes cytokine and chemokine signals, which leads to reduced immune cell infiltration in the joints
31
which fibroblasts promote repair?
Progenitor population of fibroblasts which are healthy and homeostatic - these express signals to repair lining layer - After CAR-T treatment, there is expansion of this progenitor population
32
how does FAP+ fibroblast depletion by CAR-T affect macrophages in the joint?
scSeq of immune cells: - in inflammation, tissue-resident protective macrophages are lost - these normally form a protective barrier to suppress inflammation, but are lost in RA - Lining layer protective tissue-resident macrophages are expanded after CAR-T compared to inflamed joint - Restores protective macrophages because lining layer supportive fibroblasts are repopulated This therapy restores healthy tissue, not just antagonising inflammation
33
how are tissue resident macrophages in the lining layer key for remission?
Macrophages form tight junction barrier in tissue - If drug stops in humans, high numbers of protective macrophages in tissue drive remission - Low macrophages in tissue mean high risk of flare if drug stops form protection in the joint
34
what is the PRG4 gene and how does it affect macrophages?
PRG4 gene encodes lubricin - keeps macrophages healthy Children with mutation of lubricin gene PRG4 - more inflammation and lacks protective barrier PRG4 present in pro-repair progenitor fibroblasts – these cells produce lubricin to restore protective macrophages WT mouse = intact layer of macrophages PRG4 K/O = no lubricin = altered macrophage morphology, abnormal, loss of barrier integrity and no inflammatory control
35
summary of targeting fibroblasts in RA
Target pathogenic fibroblasts to restore order in the joint - Prevent differentiation or deplete from tissue - Restore joint-resolving phenotype of macrophages and fibroblasts – restore lining – restore synovium to healthy state Should be a long-term treatment as it resets the synovial microenvironment