Exam Review 1 Flashcards
Pharmacology
The study of substances that react with living systems through chemical processes.
Toxicology
The branch of pharmacology concerned with the adverse effects of chemicals on living systems
Agonist
a substance that binds to a receptor to activate a response (usually the response you would see from the native ligand)
Antagonist
a drug that binds to a receptor to prevent the binding of native ligand (inhibits receptor)
Drug
Any substance that brings about a change in biological function through chemical processes
Receptor
Are proteins where the drug molecule reacts, and plays a regulatory role in the biological system.
(can be: regulatory proteins, enzymes, transport, proteins, structural proteins)
Pharmacogenomics
Genetic makeup vs response to drug (the future of pharmacology)
Endogenous
“essentially physiology”
ligands inside the body
Exogenous
Drugs, toxins, or poisons originating outside the body
Pharmacodynamics
the way the drug works on the body
Pharmacokinetics
The way the body works on the drug
(Absorption, distribution, metabolism, elimination)
(occasionally L=liberation)
Toxins
Biologic
Poisons
Typically non-organic
Characteristics that determine interaction between receptor and drug:
Appropriate size
Electrical charge
Shape
Atomic composition
Physical nature of drugs
solid/liquid/gas
Molecular weight of most drugs:
100-1,000 kilodalton (MWU)
Drugs >1,000 MWU can’t readily diffuse and may have to be given directly into the location of action
3 Bond types:
Covalent
Electrostatic
Hydrophobic
(see picture on lecture 1 at 1:09:16)
Covalent bonds
Drug and receptor are sharing electrons. (Very strong, Less specificity) irreversible
Electrostatic bonds (listed from greater bond strength to lesser bond strength)
Charged molecules (ionic bonds) Hydrogen bonds (weakly charged bonds) Van der Waals forces
Hydrophobic interactions
Very weak
High specificity
lipid soluble
no charge
Chirality
non-superposable on its mirror image
Stereoisomerism
Drug with exact same chemical components but are mirror images (have a central carbon)
Amount of drugs we give that are Stereoisomers
More than half
Racemic mixture
example
a mixture that is equal amounts of left and right hand stereoisomers (R-Ketamine, S-Ketamine)
What is more toxic S or R ketamine?
R-Ketamine
Allosteric
Bind to a receptor
NOT at active site
Agonist or Antagonist
non-competative
Orthosteric
Bind to receptor AT the active site
Agonist or Antagonist
Competitive
Drug concentration response curve:
Bmax
Concentration at which maximum receptors are bound
lecture 1 at 1:23:25
Drug concentration response curve:
Kd
Concentration at which 1/2 of receptors are bound
lecture 1 at 1:23:25
Drug concentration response curve:
Emax
Concentration at which the maximum effect the drug is produce (vary depending on drug)
(Acetaminophen will have lesser Emax than Morphine)(lecture 1 at 1:23:25)
Drug concentration response curve:
EC50
Concentration of drug when 50% of effect is seen
lecture 1 at 1:23:25
A low Kd means..
high drug/receptor affinity
Indirect agonist (mimic)
inhibits the molecules responsible for terminating the action of endogenous agonist. (has same effects as agonist but doesn’t bind to the same receptor)
Competitive antagonist
Orthosteric
Can be countered by increasing amounts of agonist (surmountable)
Non-competitive antagonist
Allosteric
Insurmountable
Irreversible antagonist
Can be allosteric or orthosteric
Covalently bind to receptor and do not come off
Not the same as non-competitive
Only way to get rid of it is to get rid of the receptor
Partial agonist
Binds to same receptor site as agonist but produces a lower response
Competes with full agonist form binding site
Physiologic antagonism
Drugs acting at different receptors to counter effects of each other (example: Epi increases HR at beta1, ACH decreases HR at muscarinic receptor)
Inverse agonist
and example
Greater affinity for inactive state of receptor. (no constitute activity) (example: narcan)
(see lecture 2 at 0:20:00)
Factors that determine the duration of a drugs effects:
- As long as the drug stays bound to receptor.
- Longterm downstream effects last until downstream effectors go away. (If a drug initiates the production of a protein, it will take longer to see effects and longer for response to stop)
- Receptor is degraded (in covalent bonding)
- Desensitization
Good receptor properties:
Selective
Alteration
Bad receptor properties:
“inert binding sites”
drug carriers
Potency
Concentration (EC50) or Dose (ED50) of a drug required to produce 50% of that drugs maximal effect
Maximal efficacy
Greatest possible response a drug can deliver
Dose-Response curve:
ED50
Median Effective Dose
Dose-Response curve:
TD50
Median Toxic Dose
Dose-Response curve:
LD50
Median Lethal Dose
Therapeutic Index
Establishes margin of safety (higher the number the better)
ED50 vs TD50
Animals: LD50/ED50
Humans: TD50/ED50
Idiosyncratic
Unusual drug response (we don’t know why one patient responds differently than another)
Possible reasons for idiosyncratic drug response:
- genetic factors
- hyperactive
- hypoactive
Tolerance
Response changes over course of therapy
Tachyphylaxis
Quick tolerance
Chemical Antagonism
and example
Administration of opposite charge
example: Protamine (+) and heparin (-
4 causes to variation in drug responsiveness:
- Alteration in concentration of drug that actually reaches receptor (age, weight, sex, disease state, rate of absorption/distribution/clearance)
- Variation in concentration of endogenous receptor ligand
- Alteration in number or function of receptors
- Changes in components of response distal to receptor (largest and most important cause)
Toxic effects
Extension of therapeutic effects
Some drugs produce desired and adverse effects at same receptor, others bind to different classes of receptor sites
4 ways of permeation:
Aqueous diffusion Lipid diffusion Special carriers Endocytosis/Exocytosis (All depend on drug, charge, size)
Aqueous diffusion
Diffuse by concentration gradient
Charged drugs through aqueous channels
Molecules can be large (20K-30K MVW)
Larger aqueous compartments (cytosol, Interstitial)
Lipid diffusion
Uncharged drugs
Gets into cells/body easily
Special carriers
If drug needs to get from one place to another (pumps or special carrier proteins)
Molecules bind to drug and move across barriers.
Active transport or facilitated diffusion.
Endocytosis/Exocytosis
Cell swallowing the drug, pulling it into the cell, and pushing it out the other side. (see lecture 2 at 0:56:50)
What will not diffuse through aqueous diffusion?
Highly charged molecules
Bound to large proteins (carriers)
What is the most limiting factor for drug permeation?
Lipid diffusion because there are many lipid barriers to cross
The number one thing to consider when a drug is crossing a barrier is..
..the concentration of the drug on either side of the barrier.
Fick’s Law of Diffusion
Relates concentration to variables of diffusion path (how readily a substance will move down a concentration gradient)
pKa and pH
pKa is pH at which ionized and unionized concentrations are equal
If pH < pKa, it favors..
ratio will be..
Protonated form
ratio will be <1
If pH >pKa, if favors..
ratio will be..
Unprotonated form
ratio will be >1
Henderson Hasselbach Equation
pH = pKa + log([A-]/[HA])
What does the Henderson Hasselbach equation tell us?
Ratio of ionized to unionized.
Relates ionization constant (pKa) to concentration of H+ (pH)
If pH=pKa..
..log([A-]/[HA]) = 0
ionized vs unionized are in equilibrium
Weak acids are uncharged when they are..
..protonated.
Weak bases are uncharged when they are..
..unprotonated
pH of stomach
1-1.5
pH of blood
7.35-7.45
Where are most drugs filtered?
Glomerulus
Weak acids excreted faster in..
..alkaline urine
Weak bases excreted faster in..
..acidic urine
Receptor affinity..
..determines dose
if receptor binds to drug with higher affinity you give less of drug; low affinity, more drug
Receptor selectivity..
..varies per drug
Receptors can be activated or blocked by..
Agonist or antagonist.
Orphan receptors
Receptor without a native ligand or we don’t know what the native ligand is
7 receptor categories by molecular structure:
- Seven-transmembrane receptors (7TM)
- Ligand gated channels
- Ion channels
- Catalytic receptors
- Nuclear receptors
- Transporters
- Enzymes
What is cell signaling?
Converting extracellular signals into intracellular responses
Steps in cell signaling:
Signaling molecule released from ligand--> Binds to receptor--> Activates signal transduction protein--> Production of 2nd messengers--> Activate effector protein
Lag period
Ligand binds to a receptor and starts the process of transcription/translation which is a timely process.
(can take 30minutes to several hours)
Persistence
How long the drug is going to last.
Protein degradation varies.
(Response can remain for hours to days)
Phosphorylation Cascade
Drug binds to receptor--> response is to add Phos to a protein which activates protein--> repeats--> eventually elicits cell response (see lecture 2 at 1:37:16)
Kinase
Enzymes within the cell that will add a phosphate group to a specific protein using ATP (require energy)