Exam Block 2 Flashcards
L9 LO: Describe how gram & acid-fast bacteria differ.
Name some characteristics of gram-negative bacteria.
- thin peptidoglycan cell wall
- lipopolysaccharide (LPS) on extracellular surface
- inner & outer membranes
- periplasmic space between membranes
- stains pink after gram stain & safranin counterstain
L9 LO: Describe how gram & acid-fast bacteria differ.
Name some characteristics of gram-positive bacteria.
- thick peptidolglycan cell wall
- teicohic & lipteichoic acid on extracellular surface
- one membrane
- stains purple after gram stain
L9 LO: Describe how gram & acid-fast bacteria differ.
Name some characteristics of acid-fast bacteria.
- waxy coating on cell wall
- do not stain with gram stain
- stain red with acid-fast stain
Identify some characteristics of bacterial DNA.
- haploid (have a single set of unpaired chromosomes)
- genetic material is located within a nucleoid (no formal nucleus)
L9 LO: Describe how gram & acid-fast bacteria differ.
Name the big four classes of bacteria.
- Gram-positive cocci
- Gram-positive rods
- Gram-negative cocci
- Gram-negative rods
L9 LO: Describe how gram & acid-fast bacteria differ.
What does staphylo mean?
clusters
L9 LO: Describe how gram & acid-fast bacteria differ.
What does strepto mean?
chains
L9 LO: Describe how gram & acid-fast bacteria differ.
Describe the structure of peptidoglycan.
- alternating N-acetylmuramic acid (NAM) and N-acetylglucosamine (NAG) molecules
- NAM molecules cross-link to give bacteria shape
L9 LO: Describe how gram & acid-fast bacteria differ.
Describe the structure of lipopolysaccharide (LPS).
- lipid A (endotoxin) - contains fatty acid tails and anchors LPS to outer membrane, elicits fever in the host
- core polysaccharide - contains short sugars
- o-antigen - carbohydrate chains that exclude hydrophobic compounds
L9 LO: Identify bacterial growth phases & what occurs at each phase.
Define bacterial growth.
an increase in the number of bacterial cells
L9 LO: Define binary fission & how it differs from horizontal transfer.
Define binary fission.
an asexual form of replication that separates the bacterial cell body into two new parts
L9 LO: Identify bacterial growth phases & what occurs at each phase.
Define generation time.
the time it takes for a bacterial population to double
L9 LO: Identify bacterial growth phases & what occurs at each phase.
Define quorum sensing.
a form of bacterial communication that arises when cell density is too high in a particular area
* serves to avoid overproliferation
L9 LO: Identify bacterial growth phases & what occurs at each phase.
Define pathogenicity islands.
distinct regions of bacterial chromosome responsible for virulence factors
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What feature of bacteria is missing in non-virulent strains?
pathogenicity islands
L9 LO: List growth requirements.
What are siderophores?
chelators produced by some bacteria to steal iron from the host
L9 LO: List growth requirements.
What things are required for bacterial growth?
- carbon
- nitrogen
- energy
- water
- ions (vary, Fe is important)
L9 LO: List growth requirements.
What oxygen requirement do obligate anaerobes have for growth?
cannot grow in the presence of oxygen
L9 LO: List growth requirements.
What oxygen requirement do obligate aerobes have for growth?
can only grow in the presence of oxygen
L9 LO: List growth requirements.
What oxygen requirement do facultative anaerobes have for growth?
can grow with or without oxygen
L9 LO: List growth requirements.
What growth requirement do obligate intracellular parasites have?
can only grow within living cells
* rely on ATP from the host to grow
L9 LO: Define binary fission & how it differs from horizontal transfer.
What features of binary fission make it unique?
- asexual - one parental chromosome
- semiconservative - each new chromosome comprises one strand of DNA from the parental chromosome and one complementary daughter strand
L9 LO: Define binary fission & how it differs from horizontal transfer.
Define origin of replication (OriC).
location on bacterial chromosome where replication initiator proteins bind
L9 LO: Define binary fission & how it differs from horizontal transfer.
Define terminus of replication.
location on bacterial chromosome where replication terminates
* typically directly across from OriC
L9 LO: Define binary fission & how it differs from horizontal transfer.
Define replication “bubble”.
the space located between bacterial chromosome strands as they replicate
L9 LO: Define binary fission & how it differs from horizontal transfer.
How does DNA helicase function in bacterial replication?
separates the DNA into individual strands
L9 LO: Define binary fission & how it differs from horizontal transfer.
What is the function of the replisome in bacterial replication?
contains several enzymes that create a replication fork to duplicate the leading & lagging strands at the same time (increases efficiency)
L9 LO: Define binary fission & how it differs from horizontal transfer.
What are the five steps of binary fission?
- Replication initiator proteins bind OriC.
- DNA helicase opens OriC & creates two replication forks.
- DNA is replicated & daughter strands are created by the replisome.
- Elongation
- Cleavage furrow develops & cytokinesis
Result: daughter cells
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What are the four phases of bacterial growth?
- Lag phase
- Logarithmic phase
- Stationary phase
- Death phase
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What type of growth occurs during the lag phase?
- bacterial cells are engaging in metabolic activity but are NOT replicating
- bacteria are acclimating to the growth conditions present in the host
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What type of growth occurs during the logarithmic phase?
- rapid (exponential) cell division
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What type of growth occurs during the stationary phase?
- cell proliferation & death are in balance, overall growth plateaus
- starts to occur when nutrients are running low and/or toxin levels are elevated
L9 LO: Identify bacterial growth phases & what occurs at each phase.
What type of growth occurs during the death phase?
- overall number of bacteria is declining
- as a result of host’s immune system or antibiotic effects
L9 LO: Define binary fission & how it differs from horizontal transfer.
Define horizontal gene transfer.
transfer of genetic material from one organism to another (not offspring)
L9 LO: Define binary fission & how it differs from horizontal transfer.
Why is horizontal gene transfer important?
allows bacteria to respond & adapt to their environment to increase their chances of survival
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What are the three types of horizontal gene transfer?
- Conjugation
- Transduction
- Transformation
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
Define bacterial conjugation.
unidirectional transfer of plasmid DNA
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What two types of bacteria are involved in conjugation?
- Donor cell - has fertility factor (F) plasmid
- Recipient cell - does not have fertility factor (F) plasmid
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What are the four steps of bacterial conjugation?
- F+ bacteria extends sex pilus and attaches to F- bacteria.
- One strand of plasmid DNA unwraps & enters F- bacteria.
- Each bacteria contains one strand of original plasmid DNA.
- Each bacteria synthesizes a complementary strand of DNA, both bacteria are now F+.
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What are the two specialized types of conjugation discussed?
- high frequency recombination (Hfr) - when plasmid is integrated into bacterial DNA, it also takes some of the donor DNA
- resistance plasmids - genes that confer antibiotic resistance are inserted into F plasmid and transfered into F- bacteria
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
Define bacterial transduction.
transfer of bacterial DNA between cells by bacteriophages
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What is a bacteriophage?
a virus specifically designed to infect bacteria
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What are the five steps of bacterial transduction?
- A bacteriophage injects its DNA into bacterial cell.
- The phage replicates and bacterial DNA is fragmented.
- Phage replicates & assembles, phages incorporate some bacterial DNA fragments.
- Bacterial cells lyse and release phages.
- Phages (now containing bacterial DNA) can inject this DNA into a new recipient.
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
Define recombinant DNA.
DNA formed when donor DNA combines with recipient DNA
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
Define bacterial transformation.
process of bacteria taking up foreign DNA and incorporating it into its genome
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What are the three steps of bacterial transformation.
- Donor cell lyses, releasing its DNA fragments.
- Fragments can enters recipients (through receptors or through endocytosis).
- Fragments become integrated into recipient DNA.
L9 LO: Compare & contrast the three types of horizontal DNA transfer.
What is transfection?
artificial injection of foreign DNA into a eukaryotic cell nucleus
* useful for studying gene expression or inhibition
Also A Scientist
Which scientist:
* works in Dr. Garry’s lab at Tulane SOM
* was a PhD candidate in Biomedical Sciences (now PhD)
* is a member of Zeta Phi Beta Sorority
Dr. Antoinette Bell-Kareem
L10 LO: Describe the six classes of antibiotics.
What is the mechanism of action for penicillins?
- β-lactam antibiotics
- Bind penicillin-binding proteins via β-lactam ring
- Blocks cross-linking of NAM molecules of peptidoglycan in cell walls
- Causes osmotic imbalance and bacterial death
L10 LO: Describe the six classes of antibiotics.
What makes a drug bacteriocidal?
cause bacterial death
L10 LO: Describe the six classes of antibiotics.
What makes a drug bacteriostatic?
slows bacterial growth
L10 LO: Describe the six classes of antibiotics.
What are adverse effects associated with penicillins?
- hypersensitivity / allergic reaction
L10 LO: Describe the six classes of antibiotics.
What is the mechanism of action for cephalosporins?
- β-lactam antibiotics
- Bind penicillin-binding proteins via β-lactam ring
- Blocks cross-linking of NAM molecules of peptidoglycan in cell walls
- Causes osmotic imbalance and bacterial death
L10 LO: Describe the six classes of antibiotics.
What are adverse effects associated with cephalosporins?
- hypersensitivity / allergic reaction - can be a cross-over penicillin allergy
L10 LO: Describe the six classes of antibiotics.
What are examples of 1st generation cephalosporins?
- cefazolin
- cephalexin
L10 LO: Describe the six classes of antibiotics.
What are 1st & 2nd generation cephalosporins used to treat?
gram-positive bacterial infections
L10 LO: Describe the six classes of antibiotics.
What are examples of 2nd generation cehphalosporins?
- cefaclor
- cefotetan
- cefoxitin
- cefuroxime
L10 LO: Describe the six classes of antibiotics.
What are 3rd & 4th generation cephalosporins used to treat?
gram-negative bacterial infections
L10 LO: Describe the six classes of antibiotics.
What are examples of 3rd generation cephalosporins?
- cefiximine
- cefotaxime
- ceftazidime
- ceftriaxone
IN CLASS CLINICAL CASE –> MENINGITIS (N. MENINGITIDIS)
L10 LO: Describe the six classes of antibiotics.
What are examples of 4th generation cephalosporins?
- cefepime
L10 LO: Describe the six classes of antibiotics.
What is the mechanism of action of aminoglycosides?
- binds the 30S subunit of bacterial ribosome
- inhibits protein synthesis
- bacteriocidal
- requires O2 for uptake
L10 LO: Describe the six classes of antibiotics.
What adverse effects are associated with aminoglycosides?
- nephrotoxic - damages kidneys
- ototoxic - damages ears
- teratogenic - damages unborn fetuses
L10 LO: Describe the six classes of antibiotics.
What are examples of aminoglycosides?
- gentamycin
- neomycin
- amikacin
- tobramycin
- streptomycin
L10 LO: Describe the six classes of antibiotics.
What is the mechanism of action for tetracyclines?
- bind the 30s subunit of bacterial ribosomes
- inhibit protein synthesis
- bacteriostatic
- cannot take with divalent cations because they inhibit absorption in the gut
L10 LO: Describe the six classes of antibiotics.
What are adverse effects are associated with tetracyclines?
- discoloration of teeth
- inhibition of bone growth in children
- photosensitivity
- teratogenic
L10 LO: Describe the six classes of antibiotics.
What are the three characteristic stages of Lyme Disease?
- early localized Lyme disease (erythema chronicum migrans)
- early disseminated Lyme disease (migratory arthralgia, Bell’s palsy, myocarditis)
- late Lyme disease (chronic arthritis, progressive encephalomyelitis)
L10 LO: Describe the six classes of antibiotics.
What is the mechanism of action of macrolides?
- binds 50s subunit of baceterial ribosome
- bacteriostatic
L10 LO: Describe the six classes of antibiotics.
What adverse effects are associated with macrolides?
- Arrythmia - prolonged QT interval
- Rash
- GI upset
L10 LO: Describe the six classes of antibiotics.
What complication arises with prolonged QT intervals?
- Torsade de Pointes - arrythmia not compatible with life