Exam 1: Chapters 18, 19, 20, 23 Flashcards

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1
Q

Define evolution.

A

Accumulation of genetic changes within a population over time. Change in allele frequencies between generations.

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2
Q

Define population.

A

Group of individuals of one species that live in the same geographic area at the same time.

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3
Q

Does evolution matter to the person on the street?

A

Agriculture must deal with the evolution of pesticide resistance in pests. Medicine must respond to the rapid evolution of disease-causing organisms such as bacteria and viruses Conservation management of rare and endangered species uses evolutionary principles of population genetics. Rapid evolution of microorganisms in polluted soils is used in the field of bioremediation, in which microorganisms are employed to clean up hazardous-waste sites.

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4
Q

Did Darwin come up with the idea or mechanism of evolution?

A

No, evolution was developed long before he born. Aristotle saw much evidence of natural affinities among organisms. Leonardo da Vinci proposed fossils represented organism that have lived earlier.

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5
Q

Discuss the historical development of the theory of evolution with Jean Baptiste de Lamarck (18th Century).

A

Proposed that organisms change over time by natural phenomena, had vital force that changed them toward greater complexity over time, and could pass traits acquired during lifetime to offspring (concept of inheritance proposed).

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6
Q

Name the two people developed the framework for the modern concept of evolution and how it works at about the same time.

A

Alfred Russell Wallace & Charles Darwin

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7
Q

What influenced Darwin – leading to his theory of how evolution happens?

A

Observations during voyage of HMS Beagle.

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8
Q

Describe the voyage of the HMS Beagle.

A

5 year voyage. Darwin was an unpaid volunteer member of the voyage. Darwin studied fossils, animals, and plant geologic formations. Darwin observed lots of variation in nature between locations, including variation with similar climates. Galapagos finches and tortoise shells.

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9
Q

Define artificial selection.

A

Breeders and farmers could develop many varieties of domestic animals in just a few generations. This is the process of choosing certain traits and breeding only individuals that exhibited the desired traits.

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10
Q

Explain the Galapagos finches in Darwin’s voyage of the HMS Beagle.

A
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11
Q

Explain tortoise shells varied about islands in Darwin’s voyage of the HMS Beagle.

A

The shape of the shell would tell which island it came from.

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12
Q

Explain the Brassica oleracea in Darwin’s voyage of the HMS Beagle.

A

Artifical selection.

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13
Q

Explain the snail shells in Darwin’s voyage of the HMS Beagle.

A

Variation he observed in natural (wild) populations.

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14
Q

Explain Thomas Malthus’, an economist, ideas on human populations to natural populations that influenced Darwin.

A

Populations can grow geometrically unless limited by something. (1…2….4….8….16) Food supplies grow arithmetically and limit population growth. (1…. 2….. 3….. 4……) Influenced by geologist, Charles Lyell, idea that Earth was extremely old and geological processes occur slowly over time (until then, thought to be young).

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15
Q

Define adaptation.

A

An evolutionary modification that improves the chances of survival and reproductive success in a given environment.

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16
Q

Explain Darwin’s and Wallace’s idea that natural selection is the process of evolution.

A

Results in adaptations, which are evolutionary modifications and improve chances of survival and reproductive success (fitness) in a particular environment. Over time (many generations) accumulate changes in geographically separated populations produce new species. Genetic Drift.

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17
Q

Define natural selection.

A

Better adapted organisms are more likely to survive and become the parents of the next generation. As a result, the population changes over time; the frequency of favorable traits increases in successive generations, whereas less favorable traits become scarce or disappear.

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18
Q

What are the four premises of evolution by natural selection as proposed by Darwin and Wallace?

A
  1. Genetic variation: exists among individuals in a population.
  2. Overproduction: Reproductive ability of each species causes populations to geometrically increase over time.
  3. Organisms compete with one another: limits of population growth, or a struggle for existence. (for resources: food, living space, water, light)
  4. Differential reproductive success: Offspring with most favorable characteristics are most likely to survive and reproduce and pass genetic characteristics to next generation.
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19
Q

Why does natural selection occur?

A

Natural selection occurs because individuals with traits that make them better adapted to local conditions produce more offspring than those that lack such traits.

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20
Q

Explain modern synthesis or synthetic theory of evolution.

A

Combines Darwin’s theory of evolution by natural selection with modern genetics. Explains why individuals in a population vary, how species adapt to their environment, and DNA function.

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21
Q

What is the difference between the modern synthesis and Darwin’s original theory of evolution?

A

Modern synthesis combines the natural selection from Darwin’s and adds modern genetics. Note: Darwin did not know how inheritance functioned.

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22
Q

Modern synthesis explains Darwin’s observation of variation among offspring in terms of mutation. Define mutations.

A

Changes in DNA, such as nucleotide substitutions.

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23
Q

Define fossils and sedimentary rock.

A

Remains or traces of previously existing ancient organisms typically left in sedimentary rock. Sedimentary rock are layers that occur in sequence of deposition and recent layers on top of older ones.

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24
Q

What evidence from the fossil record supports the theory of evolution?

A

The fossil record illustrates transitions from unicellular organisms to multicellular organisms demonstrating that life has evolved through time. Few organisms that die become fossils and each fossil discovered is a separate test of the theory. Fossils provide a record of ancient organisms and some understanding of where and when they lived. Using fossils of organisms from different geologic ages, scientists can sometimes infer the lines of descent (evolutionary relationships) that gave rise to modern-day organisms.

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25
Q

Define index fossils.

A

Characterize a specific layer over large geographic areas. Fossils of organisms that existed for a relatively short geographic time but were preserved as fossils in large numbers.

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26
Q

Define radioactive isotopes or radioisotopes, radioactive decay, and half-life.

A

Present in a rock provide a means to accurately measure its age. As the radiation is emitted, the nucleus of the radioisotope changes into the nucleus of a different element; this process is known as radioactive decay. The time required for one half of the atoms of a radioisotopes to change into a different atom is known as half-life. Radioisotopes differ significantly in their half-lives.

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27
Q

Explain the whale evolution.

A
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28
Q

Define biogeography.

A

The study of the past and present geographic distribution of organisms. Geographic distribution of organisms has direct influence on evolution. Areas separated from others and contain organisms evolved in isolation that are unique in those areas.

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29
Q

Define continental drift.

A

At one time, continents were joined to form a supercontinent. Continental drift caused landmasses to separate and played major role in evolution.

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30
Q

Explain how fossil distribution occurred.

A

In continental drift, fossils are now found on separate continents.

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31
Q

What evidence for evolution is derived from comparative anatomy?

A

Homologous features indicate organism’s evolutionary affinities.

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32
Q

Define homologous features.

A

Basic structural similarities that may be used in different ways and are derived from same structure in a common ancestor.

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33
Q

Explain homology in animals.

A
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34
Q

Explain homology in plants.

A
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35
Q

Define analogous features called homoplastic or homoplasy

A

Evolved independently but similar functions in distantly related organisms. Demonstrates convergent evolution.

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36
Q

Define convergent evolution.

A

Organisms with separate ancestries adapt similar to comparable environments.

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37
Q

Explains convergent evolution in mammals.

A
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38
Q

Explain homoplasy in plants.

A
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39
Q

Define vestigial structures.

A

Nonfunctional or degenerate remnants of structures functional in ancestral organisms. Structures occasionally become vestigial as species adapt to different modes of life

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40
Q

Explain vestigial structures in the python.

A
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41
Q

How does developmental biology and molecular biology provide insights into the evolutionary process?

A

Genetic changes often result in gene mutations that affect development in different animals. Developmental biology unravels evolutionary patterns. Accumulation of genetic changes since organisms diverged and modified development patterns in more complex vertebrate embryos. Molecular evidence shows universal genetic code and conserved sequences of amino acids in proteins and of nucleotides in DNA.

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42
Q

Explain evolution now.

A

Darwin assumed evolution to be so gradual that humans cannot observe it. In fact, rapid evolution on a scale of years has been observed in many diverse organisms. Studies demonstrate that evolution is occurring now, driven by selective environmental forces (such as predation) that can be experimentally manipulated.

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43
Q

Explain the Reznick & Cook experiment.

A

add photo

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44
Q

Define population genetics.

A

Study of genetic variability within a population and of the evolutionary forces that act on it.

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45
Q

What is a population’s gene pool.

A

Includes all the alleles for all the loci present in the population. More interested in alleles (variations of those genes)

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46
Q

What is the relationship between genotype, phenotype, and allele frequencies?

A

Frequency or percentage Genotype-diploid sand eukaryotes Allele frequency and consider the two alleles separately

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47
Q

Define allele frequency.

A

The proportion of a specific allele (that is, of A or a) in a particular population.

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48
Q

Define genotype frequency.

A

The proportion of a genotype in the population.

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49
Q

Define phenotype frequency.

A

The proportion of a phenotype in the population.

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50
Q

What is the Hardy-Weinberg Principle?

A

A model that predicts when allele and genotype frequencies do not change from generation to generation in a population that population is at genetic equilibrium. Allele frequency is most.

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51
Q

What is the significance of the Hardy–Weinberg principle as it relates to evolution?

A

The Hardy–Weinberg principle predicts allele and genotype frequencies for a population that is not evolving.

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52
Q

List five conditions required for genetic equilibrium in the Hardy-Weinberg Principle.

A

Hardy-Weinberg Principles applies only if… Mating is random in population No net mutations change allele frequencies Population is large Individuals don’t migrate between populations Natural selection does not occur

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53
Q

Explain the Hardy-Weinberg equation.

A

One gene, 2 alleles (A, a); one allele is dominant p = frequency of dominant allele (A) q = frequency of recessive allele (a) Frequency of alleles in population…. p + q = 1 But each individual is diploid. p2 + 2pq + q2 = 1 p2 = frequency of homozygous dominant genotype 2pq = frequency of heterozygous genotype q2 = frequency of the homozygous recessive genotype 1 is constant.

54
Q

Define microevolution.

A

Generation to generation changes in allele or genotype frequencies within a population. Often involves relatively small or minor changes, usually over a few generations. Microevolution is a change in a population’s allele or genotype frequencies over successive generations. Evolutionary process = how it happens

55
Q

How does the microevolutionary force nonrandom mating alter allele frequencies in populations?

A

Individuals select mates based on phenotype and indirectly select corresponding genotypes. Inbreeding reduces ability to reproduce. Inbreeding depression. Inbreeding and assortative mating increases the frequency of homozygous genotypes.

56
Q

Define inbreeding.

A

The mating of genetically similar individuals who are more closely related than if they chosen at random. Mating of genetically similar individuals not chosen at random from entire population. Reduce ability to reproduce.

57
Q

Define inbreeding depression.

A

Inbred individuals have lower fitness than those not inbred.

58
Q

Define fitness.

A

Ability to reproduce. The average number of surviving offspring of one genotype compared to the average number of surviving offspring of competing genotypes.

59
Q

Explain inbreeding depression in mice.

A
60
Q

Define assortative mating.

A

Individuals select mates by phenotypes.

61
Q

How does the microevolutionary force mutation alter allele frequencies in populations?

A

Mutations are unpredictable changes in DNA source of new alleles and increase genetic variability acted on by natural selection. Phenotype is dictated by genotype.

62
Q

How does the microevolutionary force genetic drift alter allele frequencies in populations?

A

Genetic drift decreases genetic variation in population. Changes caused by genetic drift are usually not adaptive (adaptive-feature that increases fitness). Bottleneck Founder effect

63
Q

Define genetic drift.

A

Random change in allele frequencies of a small population. Decreases genetic variation in population.

64
Q

Explain bottleneck in genetic drift.

A

A sudden decrease in population size caused by adverse environmental factors (‘disasters’).

65
Q

Explain founder effect in genetic drift.

A

Genetic drift that occurs when a small population colonizes a new area. (e.g., chance long distance dispersal; introduction of non-native species)

66
Q

Define gene flow.

A

Movement of alleles caused by migration of individuals (or gametes) between populations.

67
Q

How does the microevolutionary force gene flow alter allele frequencies in populations?

A

Gene flow causes changes in allele frequencies.

68
Q

What are the microevolutionary forces?

A

Microevolutionary forces include nonrandom mating, mutation, genetic drift, gene flow, and natural selection.

69
Q

How does the microevolutionary force natural selection alter allele frequencies in populations?

A

Natural selection causes changes in allele frequencies that lead to adaptation. Natural selection operates on an organism’s phenotype and changes genetic composition of population to ‘favor’ a particular environment. There are several kinds of interaction between environment and phenotype. Stabilizing selection Directional selection Disruptive selection

70
Q

Define stabilizing selection.

A

The process of natural selection associated with a population well adapted to its environment. Selects against phenotypic extremes. Those with average or intermediate phenotypes are favored.

71
Q

What are the modes of natural selection?

A
72
Q

Define directional selection.

A

May favor phenotypes at one of the extremes of the normal distribution if an environment changes over time. Over successive generations, one phenotype gradually replaces another.

73
Q

Define disruptive selection in genetic variation.

A

A special type of directional selection in which there is a trend on several directions rather than just one.

74
Q

Define genetic polymorphism in genetic variation.

A

Genetic variation among individuals in a population, is extensive in populations, although many of the genetic variants are present at low frequencies. Much is not evident because it does not produce distinct phenotypes.

75
Q

Define balance polymorphism in genetic variation.

A

A special type of genetic polymorphism in which 2 or more alleles persist in a population over many generations due to natural selection. Heterozygote advantage and frequency-dependent selection are mechanisms that preserve balanced polymorphism.

76
Q

Define heterozygote advantage in genetic variation.

A

Occurs when the heterozygote exhibits greater fitness than either homozygote.

77
Q

Define frequency-dependent selection in genetic variation.

A

The fitness of a particular phenotype depends on how frequently it appears in the population.

78
Q

Explain the heterozygote advantage in sickle cell anemia.

A
79
Q

Explain the frequency-dependent selection in chichlid.

A
80
Q

How many kinds of life are known?

A

About 1.7 million species known to science (Phylogeny with 1.7 million branches) Estimates of how many total species exist range from 4-100 million. The vast majority (>99%) of species that have ever lived are extinct.

81
Q

What is the biological species concept (BSC)?

A

A species…. one or more populations members interbreed in nature produce fertile offspring do not interbreed with other such groups reproductively isolated (do not interbreed with member if different species)

82
Q

What is the evolutionary species concept (ESC) or phylogenetic species concept?

A

A species…. a single evolutionary lineage of ancestor-descendent populations, maintains its identity from other such lineages, has its own evolutionary tendencies and historical fate

83
Q

What are the limitations to the biological species concept (BSC)?

A

Applies only to sexually reproducing organisms. Does not apply to bacteria. Many plants do not reproduce sexually Some organisms interbreed ‘occasionally’ Difficult to apply without information on breeding

84
Q

What are the limitations to he evolutionary species concept (ESC) or phylogenetic species concept?

A

Need insight on phylogenetic relationships

85
Q

What is the significance of reproductive isolating mechanisms in making species distinct?

A

Restrict gene flow between species Prevent interbreeding between to different species whose ranges (area where each lives) overlap

86
Q

Distinguish among different prezygotic and postzygotic barriers.

A

Prezygotic barriers prevent fertilization from taking place sperm and egg do not meet Postzygotic barriers fertilization occurs, but resulting organism is not viable and/or sterile

87
Q

What the prezygotic barriers?

A

Temporal isolation Habitat isolation Behavioral isolation Mechanical isolation Gametic isolation

88
Q

Explain the prezygotic barrier temporal isolation.

A

Genetic exchange is prevented between two species reproduces at different times of day, season, or year.

89
Q

Explain the prezygotic barrier habitat isolation.

A

Two closely related species live and breed in different habitats in the same geographic area.

90
Q

Explain prezygotic barrier temporal isolation in the frog.

A
91
Q

Explain the prezygotic barrier behavior isolation.

A

Distinctive courtship behaviors prevent mating between species.

92
Q

Explain the prezygotic barrier mechanical isolation.

A

Incompatible structurals difference in reproductive organs of similar species.

93
Q

Explain the prezygotic barrier gametic isolation.

A

Gametes from different species are incompatible because of molecular and chemical differences.

94
Q

What are the postzygotic barriers?

A

Hybrid inviability Hybrid sterility

95
Q

Explain the postzygotic barrier hybrid inviability.

A

Interspecific embryos die during development.

96
Q

Explain the postzygotic barrier hybrid sterility.

A

Prevents interspecific hybrids that survive to adulthood from reproducing successfully.

97
Q

Explain hybrid sterility in mules.

A
98
Q

Define speciation.

A

The evolution of a new species. The evolution of different species begins with reproductive isolation, in which two populations are no longer able to interbreed successfully. The gene pools of the two separated populations begin to diverge in genetic composition. Speciation may require millions of years but sometimes occurs much more quickly

99
Q

What is allopatric speciation?

A

When one population becomes geographically separated from the rest of the species and subsequently evolves by natural selection and/or genetic drift. Evolution of a new species from ancestral population In allopatric speciation, ancestral populations diverge into different species due to geographic isolation, or physical separation. More likely to occur if original isolated population is small makes genetic drift more significant random change in allele frequencies

100
Q

Explain allopatric speciation in pupfish.

A
101
Q

Explain allopatric speciation in the squirrels.

A
102
Q

What is sympatric speciation?

A

A new species evolves within the same geographic region as parental species. Does not require geographic isolation More common in plants than animals

103
Q

Explain sympatric speciation in plants.

A

Usually results from polyploidy polyploid individual (>2 sets of chromosomes) is a hybrid derived from two species extra set of chromosomes (humans- diploid from mother and father)

104
Q

Explain allopolyploidy in plants in sympatric speciation.

A

Called allopolyploidy because the two sets of chromosomes come from DIFFERENT species.

105
Q

Explain sympatric speciation in animals.

A

Cichlids (“sik-lids”). Lakes in east Africa Diverse feeding habits in different species (algae, dead organic matter, fish scales, insect larvae, ect.) Evidence indicates different species evolved in the lakes they now inhabit (sympatrically) Great diversity in Cichlid species Rapidly going extinct due to human impacts

106
Q

Rates of speciation are not always the same. Distinguish between punctuated equilibrium or gradualism.

A

Punctuated equilibrium model evolution proceeds in spurts short periods of active speciation interspersed with long periods of stasis Gradualism model (aka phyletic gradualism) populations slowly diverge from one another by accumulation of adaptive characteristics Darwin’s original ideas based on this

107
Q

punctuated equilibrium vs gradualism.

A
108
Q

What is macroevolution?

A

The evolution of species and higher taxa. A large-scale phenotypic changes in populations that typically warrant the placement of the populations in taxonomic groups at the species level and higher.

109
Q

Discuss macroevolution in the context of novel features.

A

Development: Subtle changes in development (e.g., time of gene expression) can lead to major evolutionary novelties. The orderly sequence of events that occurs as an organism grows and matures. Slight genetic changes in regulatory genes could cause major structural changes in an organism. Preadaptations: structures that originally fulfilled one role but changed in a way that was adaptive fora different role. Allometric growth: varied rates of growth for different parts of the body, results in overall changes in the shape of an organism. Paedomorphosis: the retention of juvenile characteristics in the adult, occurs because of the changes in the timing of development.

110
Q

Explain paedomorphosis in the salamander.

A
111
Q

Explain adaptive radiation and adaptive zones in macroevolution.

A

Diversification of ancestral species into many new species in a relatively short period of time. Adaptive zones: new ecological opportunities not exploited by ancestral organism When many adaptive zones are empty, colonizing species diversify and exploit them .

112
Q

Explain adaptive radiation in Hawaiian silverswords and honeycreepers

A
113
Q

Explain extinction in macroevolution.

A

Death of a species. When species become extinct, adaptive zones they occupied become vacant and allows other species to evolve and fill zones. Background extinction: continuous, low-level extinction of species Mass extinction: extinction of numerous species, higher taxonomic groups Earth now in 6th major extinction period Primary cause: Humans

114
Q

Define systematic biology.

A

Scientific study of diversity of organisms and their evolutionary relationships.

115
Q

Define taxamony.

A

branch of systematics

naming, describing, classifying organisms

Biologists classify organisms in taxonomic categories arranged in a hierarchy from most inclusive (domain) to least inclusive (species)

116
Q

Why use scientific names and classifications of organisms? Why not common names?

A

Scientific names permits biology to be a truely international science.

117
Q

What is the binomial system of naming organisms?

A

Hierarchical; most inclusive to least inclusive

Used by biologists to name organisms

Developed by Linnaeus, mid-18th century

Basic unit of classification: species

118
Q

What are the two parts of species name?

A

genus name

specific epithet

119
Q

What are the six kingdoms and three domains of organisms?

A

Six Kingdoms:

  1. Archaea: prokaryotes
  2. Bacteria: prokaryotes
  3. Protista: unicellular, aquatic eukaryotes
  4. Fungi: molds, yeasts, and mushrooms
  5. Plantae: multicellular eukaryotes
  6. Animalia: multicellular eukaryotes

Three domains:

  1. Archaea: prokaryotes; peptidoglycan absent in cell walls
  2. Bacteria: prokaryotes; peptidoglycan present in cell walls
  3. Eukarya: all eukaryotes- protists, fungi, plants, animals
120
Q

Given its distinguishing characters, how is an organism classified into the appropriate domain and kingdom?

A

If not prokaryote then assign to domain Eukarya

Check characteristics (Table 23-2) to determine appropriate kingdom

121
Q

What difficulties are encountered in choosing criteria to classify organisms? What criteria are useful? Which are not?

A

Understanding the tree of life (phylogeny)

relationships based on shared characteristics

depends mainly on homologous similarities

What kind of similarities? morphology, anatomy, biochemistry, DNA, behavior, etc.

122
Q

Define node.

A

Represents divergence, or splitting, of two or more new groups from a common ancestor.

123
Q

Define analogy, convergent evolution, reversal, and homoplasy.

A

Seemingly homologous characters may be acquired independently by convergent evolutions, independent evolution of similar structures in distantly related organisms (birds/bats), or by reversals, reversion of a trait to its ancestral state.

Homoplasy: supfically similar characters that not homologous

124
Q

How is the concept of shared derived characters applied to the classification of organisms?

A

Synapomorphies: Shared derived characters that indicate a more recent common ancestor

Systematists consider shared derived characters in defining groups

Plesiomorphies: Shared ancestral characters that suggest a distant common ancestor

Worthless for inferring relationships

125
Q

Describe how analyses if molecular homologies contribute to the science of systematics?

A

Molecular systematics depends on molecular structure to clarify phylogeny. Comparisons of nucleotie sequences in DNA and RNA, and of amino acid sequences in proteins, provide important information about how closely organisms are related.

126
Q

Explain molecular revolution in systematics.

A

Comparisons of nucleotide sequences in DNA and RNA

and amino acid sequences in proteins.

Its a numbers game. DNA allows you thousands of characters. Revolution because now there is more characters

127
Q

What is phylogeny (evolutionary history) based on?

A

Phylogeny (evolutionary history) is based on common ancestry inferred from shared characters, including structural, developmental, behavioral, and molecular similarities, as well as from fossil evidence.

128
Q

What is the difference between monophyletic, paraphyletic, and polyphyletic taxa?

A

Monophyletic group, or clade, includes all the descendants of the most recent common ancestor.

Paraphyletic group consists of a common ancestor and some, but not all, of its decendants.

Polphyletic group consists of organims that evolved from different recent ancestors.

129
Q

How would reptiles and birds be classified differently by an evolutionary systematist vs cladist?

A

Cladists: insist that higher taxa be monophyletic and use shared derived characters to determine relationships.

Evolutionary Systematics: based on shared ancestral characters as well as shared derived character.

Phylogenetic trees are diagrams of hypothesized evolutionary relationships; cladograms are phylogenetic trees constructed by analyzing shared derived characters

Phylogenies & cladograms are hypotheses that are subject to testing and falsification.

130
Q

Explain cladistics. How is a cladogram constructed?

A

Cladograms: phylogenetic trees

Cladogram indicates which taxa share a common ancestor

Select taxa of interest.

Select relevant characters: homologous characters,

Select outgroup (taxon for comparison).

Assume parsimony until contrary evidence is available.

  1. Interpret the characters and character states
  2. Identify which character states are primitive (plesiomorphic).
  3. Group taxa with shared derived character states (synapomorphies).
131
Q

Explain the Principle of parsimony.

A

The simplest explanation (shortest tree) is preferred.