evolutionary genetics Flashcards
RNA functions
structure
template
genetic info carrier/store
biocatalyst
recognition
scaffolding
2’OH on RNA properties
unstable
increases chemical flexibility
nucleophile
hammerhead ribozyme
RNA motif catalyzing reversible cleavage and ligation reactions at specific site within RNA molecule
tetrahymena
unicellular, cilliated protozoan
common/ short generation time/ easily grown
tetrahymena RNA
group 1 intron is self-splicing, requiring exogenous guanosine nucleotide
hammerhead ribozyme targets
mRNA coding virus receptors
viral RNAs
separates strands into single lengths
how do virusoids replicate
rolling circle mechanism
steps in SELEX
binding
wash
elution
amplification
SELEX
system evolution of ligands by exponential enrichment
allowed identification of aptamers specifically against cell types
aptamers
molecules that bind to specific targets
what are aptamers used in
biosensors
drug-targeting agents
gene regulation
pro ‘RNA-world’
RNA functs for info storage and catalysis
simpler as single molecule replicating
continuity
molecular fossils of NAD and ATP
disadvantages of Miller-Urey experiment
done in reducing environment
borosilicate flask likely contributed to organic material
SSU RNA
Small sub-unit ribosomal RNA
scaffolding upon which ribosome is based
complex chronometer
conserved protein/ nucleic acid with a constant mutation rate acting as a phylogenetic marker