Eukaryotes Flashcards

1
Q

Why is cell size limited in eukaryotes

A

SA/vol ratio
Diffusion rates of molecules (partly determined by particle size)
The need for high concentrations of compounds and enzymes for reactions

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2
Q

What is the use of compartmentalisation of eukaryotic cells

A

Compartmentalisation = processes localised and concentrated
Subdivide into membrane bound compartments (organelles)
Need for active and organised transport system (cell signalling, cytoskeleton etc)

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3
Q

Use of differentiated eukaryotic cells

A

Compartmentalisation = specialisation of specific tasks
Important for multicellular organisms
May have random mutation during development

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4
Q

stem cells in eukaryotes

A

Can become anything
Regulated by intra/extracellular signals (biotic and abiotic)
In both plants and animals

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5
Q

What are the 3 ways to study organelles

A
  • drawings
  • fluorescence microscopy (tag organelle with fluorescent protein)
  • electron microscopy (fix cell and cut slices then stain with OsO4
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6
Q

Describe transport/secretory vesicles

A

Membrane bound
Contains proteins for transport/export
Only secretory if actually being secreted
Trafficked along cytoskeleton

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7
Q

Describe lysosomes

A

Storage for enzymes that break up cellular components
Contain at least 50 hydrologic enzymes
Can break down almost any biological molecule so must remain separated
Degradation of organelles via autophagy = organelles delivered to lysosomes for degradation
A lot of diseases related to misfunction of lysosomes

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8
Q

Describe peroxisomes

A

Assist lysosomes in cell clean up
Generate and degrade hydrogen peroxide
Breakdown fatty acids/lipid components of membranes
Detoxify harmful compounds

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9
Q

Describe centrosome

A

Very different between plants and animals
Important in cell division
Taxol (form of trees) important in cancer treatment: Causes binding of centrosomes and microtubules

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10
Q

Describe cytoskeleton

A
Frame work: shape and structure 
Forms basis of internal transport 
Cellular movement 
Contraction of skeletal muscle 
Made of microtubules, microfilaments, intermediate filaments and Actin
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11
Q

Describe microtubules

A

Monomers that polymerise
Very hard to see in electron microscope - if used fluorescence whole cell glows
Organised in bundles
Constantly built (polymerisation end) and broken down (depolymerisation end)

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12
Q

Describe actin

A

Influence locomotion and movement

Major cytoskeleton component of muscle cells

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13
Q

Describe nuclear pores

A

30 different proteins used to make a pore
- proteins made in cytosol
Outer diameter 120nm
Fusion of inner and outer membrane
Small particles injected into the cell can directly enter the nucleus: channels freely permeable to ions and small molecules

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14
Q

Describe proteins used for nucleus pores

A

Made in the cytosol
Contains NLS: nuclear localisation signal (specific amino acids sequence)
NLS recognised by receptor protein called importin they bind and regulate transport through pore
She’s ATP delivered by RAN-GTPase

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15
Q

Describe how RNA leaves the nucleus

A

Transported through a nuclear pore into cytosol
Binds to protein containing nuclear export signal (NES)
NES recognised by exportin receptor protein
Exportin transports them through the pore

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16
Q

Describe the nuclear matrix

A

Genetic information located there
Each chromosome has its own discrete location
Maintains shape of nucleus: made of insoluble network fibrous proteins Called Latins
- line the inner membrane
-provides mechanical strength
Newly synthesised nucleic acids associate with the matrix

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17
Q

Describe the nucleolus

A

Dedicated for ribosome production
1+ spherical structures, several micrometers in diameter
Number and size corresponds to level of protein synthesis

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18
Q

What are the functions of the smooth endoplasmic reticulum

A
Drug detoxification 
Carbohydrate metabolism 
-hepatocytes break down stored glycogen
Calcium storage 
- sarcoplasmic reticulum in muscle cells 
-released in response to extracellular signalling fr muscle contraction 
Steroid biosynthesis 
- adrenal glands, testes, ovaries 
- cholesterol and steroid based hormones
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19
Q

What are the 3 types of endoplasmic reticulum

A

Rough
Smooth
Transitional (exit site of proteins leaving rough ER)

20
Q

How do vesicles move along the cytoskeleton

A

Via active transport
Microtubules = long range transport
Actin = short range
Adaptor (attachment) and motor (walking) proteins use them to move along.

21
Q

What are the 3 regions if the golgi

A

Cis

  • contains golgi network and cis cisternae
  • receives proteins from ER and acts as sorting station

Medial
-cisternae

Trans
- golgi network and trans cisternae

22
Q

What are the 2 methods of how the Golgi body turn vesicles into secretory vesicles

A

Vesicular transport theory

Cisternal maturation theory

23
Q

Describe vesicular transport theory

A

Vesicles enter from bottom to top (cis to trans)
Resident enzymes stay in cisternae
Proteins are moved between the cisternae

24
Q

Describe cisternal maturation theory

A

Currently favoured theory
- cis cisternae mature into trans cisternae and new cis created from fusion of vesicles at cis face
Enzymes move from trans down to cis

25
Q

How do golgi differ in plants from animals

A
Animals = few large Golgi localised around nucleus
Plants = loads of small golgi
26
Q

What is anterograde transport of vesicles

A

Forward pathway of vesicles for secretion

27
Q

What is retrograde transport

A

Vesicles released in opposite direction

Vesicles fo back to endoplasmic reticulum and eventually the cytosol

28
Q

Why do mitochondria have such elaborate structures?

A
  • is the site of aerobic respiration
    Glucose + oxygen = carbon dioxide and water (ATP synthesised)
    Needed for the oxidation of glucose = proton gradient, pumps protons into intercellular space and drives ATP synthesis
29
Q

Describe mitochondrial matrix

A

Contains enzymes, DNA and ribosomes and other enzymes encoded in the nucleus and imported

30
Q

What does mitochondrial DNA code for

A

RRNA
TRNA
Inner membrane proteins

31
Q

Describe mitochondrial Cristae

A

Used to increase SA (inner 5 : outer 1)
Can accommodate large number of protein complexes
Number of mitochondria and number of Cristae ~ activity of cells

32
Q

Describe mitochondria inner membrane

A

Permeability barrier to most solutes

Partitions the mitochondria into 2 components: creates inter membrane space

33
Q

Describe mitochondrial outermembrane

A

No significant permeability barrier

Contains trans membrane channel proteins called porins

34
Q

Describe endocytosis

A

Imports extracellular material
Uses cell/tissue specific receptors localised in plasma membrane (isn’t passive)
Protein will be complementary = bind and form complex which creates coat proteins that make coat complex on inside of the cell
When complex made membrane will invaginate and create vesicle: inside is coated pit

35
Q

Describe endosomes

A

Endocytic vesicles fuse to create early endosome then fuse again to create late endosome
During process PH decreases: due to degrading enzymes from golgi
Endosomes create lysosomes and vesicles produced by golgi contains lysosomal proteins then leave the cell via exocytosis
Transport material to golgi, lysosome or vacuole (plants)

36
Q

Describe exosomes

A

Extracellular vesicles
Formed from cell membrane
Components enter from cytoplasm and binds back with membrane then releases components out of cell
Play large role in cell-cell signalling

37
Q

What are the roles of microtubules

A
  1. Organisation of cell shape and polarity
  2. Intracellular transport of vesicles and organelles
  3. Chromosome movements
38
Q

What are the microtubules subunits and how do they form microtubules

A

Alpha - tubulin
Beta - tubular
Together they form tubulin dimer
Tubulin dimers form Oligomers and then protofilaments
- sheet of protofilaments form a microtubule

39
Q

How do microtubules grow

A

They exam and from the plus end and also break down from the plus end

40
Q

Describe motor proteins

A

Kinesin = moves towards plus end
Dynein = moves towards the negative end
Energy dependent process

41
Q

What are the subunits of microfilaments

A

Subunits = g-actin monomer

42
Q

What are the functions of microfilaments

A
Cell locomotion 
Cytokinesis 
Muscle contraction 
Maintenance of cell shape 
Intracellular transport
43
Q

Describe polymerisation of microfilaments

A

G actin builds up and creates filamentous actin (f actin)

Can become many different types of proteins

44
Q

Describe depolymerisation of microfilaments

A
Depolymerises from the pointed end of the actin filaments 
Capping proteins bind to actin filaments = barbed end and prevents filament assembly 
Protrusion filpodium (protrusions created by actin bundles) prevented
45
Q

Describe the movement of actin

A

Extension at the front
Adhesion
Translocation via contraction at the back
De-adhesion of back section

46
Q

What are functions of intermediate filaments and its subunits

A
Subunit: dimers 
Functions:
-structural support
-maintenance of cell shape 
- nuclear lamina
47
Q

How does the intermediate filament subunits build up

A

Becomes tetramer then protofilaments then filament